Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g6088.t1
Gene name
Locationscaffold_036:177981..178439
Strand+
Gene length (bp)458
Transcript length (bp)219
Coding sequence length (bp)219
Protein length (aa) 73

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06842 DUF1242 Protein of unknown function (DUF1242) 4.5E-18 10 44

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 10 32 22
2 53 70 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g6088.t1
MSALFNFQSLLLVFLLIICTSTYAHSMMPGIMDRNQSGFFGIFWKCARIGERLSPYVSICCVVMAVSIFFGG*
Coding >Ani_SJS100_1|g6088.t1
ATGTCGGCCTTGTTCAACTTTCAGTCACTTCTGCTCGTGTTTTTGCTTATCATCTGCACGAGCACATATGCACAC
TCGATGATGCCGGGGATCATGGACCGCAACCAGAGCGGCTTCTTTGGGATCTTCTGGAAGTGTGCTAGGATCGGT
GAACGGTTGAGTCCGTATGTCAGTATATGCTGCGTGGTGATGGCTGTCTCGATTTTCTTCGGCGGCTGA
Transcript >Ani_SJS100_1|g6088.t1
ATGTCGGCCTTGTTCAACTTTCAGTCACTTCTGCTCGTGTTTTTGCTTATCATCTGCACGAGCACATATGCACAC
TCGATGATGCCGGGGATCATGGACCGCAACCAGAGCGGCTTCTTTGGGATCTTCTGGAAGTGTGCTAGGATCGGT
GAACGGTTGAGTCCGTATGTCAGTATATGCTGCGTGGTGATGGCTGTCTCGATTTTCTTCGGCGGCTGA
Gene >Ani_SJS100_1|g6088.t1
ATGGTCAGTGAATACTCCGCAATTTCCCACTTGCTGCCACATCTACTGGCAATGGATCGTTGACTTCTCGTGTAT
GATGCAGTCGGCCTTGTTCAACTTTCAGTCACTTCTGCTCGTGTTTTTGCTTATCATCTGCACGAGCACATATGC
ACACTCGATGATGCCGGGGATCATGGACCGCAACCAGAGCGGGTAAGTGCTGCTGACTGCTGCTTTCTGCAGCGG
ACCTCAAGTCGAGTCTATGAAGTGACATGATTCTAATCTGACCTTATATTCAGCTTCTTTGGGATCTTCTGGAAG
TGTGCTAGGATCGGTGAACGGTTGAGTCCGTATGTCAGTATATGCTGCGTGGTGATGGCTGTAAGTATATTAAGC
ACCTTCCCGGAACCAACTACTAGCTTAGCCTGGAATGCTAATGTCCATGCTCTTGCCAGGTCTCGATTTTCTTCG
GCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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