Protein ID | Ani_SJS100_1|g6050.t1 |
Gene name | |
Location | scaffold_036:82431..83864 |
Strand | - |
Gene length (bp) | 1433 |
Transcript length (bp) | 1236 |
Coding sequence length (bp) | 1236 |
Protein length (aa) | 412 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08450 | SGL | SMP-30/Gluconolactonase/LRE-like region | 4.0E-10 | 177 | 289 |
PF08450 | SGL | SMP-30/Gluconolactonase/LRE-like region | 2.0E-08 | 307 | 392 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 18 | 0.999786 |
Orthofinder run ID | 3 |
Orthogroup | 6317 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6050.t1 MQRLLLLLASFTGSLVHAQTGVTHPISEKCGRSVVCVNRYANVLPYHFFRNVSTMDTVTTFGDTTVANGTVLQDV KTADFIVYNKEKGLDILGSNPSYEYVFAVNDAVHEAPVYVASQNKLYLSQLAPPPGYLPQLVIDLNQDPPTLSEY LSDPPVYAPNGGTFHDGKIIWGASGGNRSIGGTEQRISLRTLDPETNKTTSLVNNYFGYYFNTIDDLAVHPKTGD IWFTDPQYSWFNDITDTPPQLPCASYRYNTSSGAVVVVDDSIGQPNGIAFTPDGSIVYISDTAAVSAPIDPKYGH PGSTFNTTHRRTIYAFDVSEDGAHAYNKRAIYLAPGFVPDGLKVAANGYILTGCGRGVDVLDPSGELLLTVQTNY TVQNFAWTGPELKTLWLMGNGGISKVEWNLPGQVLK* |
Coding | >Ani_SJS100_1|g6050.t1 ATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTTCACGCCCAAACTGGGGTTACCCATCCC ATCTCAGAGAAATGTGGCCGTTCGGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCCCTACCACTTCTTTCGC AATGTAAGCACCATGGACACCGTCACGACCTTCGGTGATACCACCGTAGCAAACGGCACAGTGCTGCAAGACGTC AAGACCGCGGATTTCATTGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAACCCGAGCTACGAATAC GTTTTCGCCGTAAACGATGCGGTGCACGAAGCCCCCGTCTACGTGGCATCGCAGAACAAGCTGTACCTCTCGCAG CTCGCGCCGCCGCCGGGCTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCCAACATTATCAGAATAC CTCTCCGATCCACCTGTCTATGCCCCCAATGGCGGAACATTCCATGACGGCAAAATCATCTGGGGCGCATCTGGC GGTAACAGATCGATTGGCGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGAGACAAACAAGACAACA AGCCTGGTCAACAATTACTTTGGATACTACTTCAACACAATTGACGACCTCGCCGTGCATCCCAAGACCGGCGAT ATCTGGTTCACAGATCCACAATACTCCTGGTTCAATGATATCACAGACACCCCTCCCCAGCTTCCCTGCGCTAGT TACAGATATAACACTTCTTCTGGGGCAGTGGTAGTTGTGGACGACTCAATCGGTCAGCCAAACGGGATCGCTTTC ACTCCGGATGGATCTATCGTGTACATCAGCGATACTGCGGCAGTCAGCGCTCCTATTGATCCTAAATATGGCCAT CCGGGCAGTACGTTTAATACCACGCATCGGCGGACTATTTACGCGTTTGACGTGAGCGAGGATGGTGCCCACGCT TACAACAAACGGGCCATTTATCTGGCACCAGGCTTTGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTATATT TTGACGGGGTGCGGTCGAGGTGTCGACGTTCTCGACCCCTCTGGGGAGCTGCTCTTGACGGTTCAGACCAACTAT ACGGTCCAGAATTTCGCTTGGACGGGTCCGGAACTGAAGACGCTATGGCTGATGGGCAATGGAGGAATCAGTAAG GTCGAATGGAACCTGCCCGGCCAAGTGTTGAAATAA |
Transcript | >Ani_SJS100_1|g6050.t1 ATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTTCACGCCCAAACTGGGGTTACCCATCCC ATCTCAGAGAAATGTGGCCGTTCGGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCCCTACCACTTCTTTCGC AATGTAAGCACCATGGACACCGTCACGACCTTCGGTGATACCACCGTAGCAAACGGCACAGTGCTGCAAGACGTC AAGACCGCGGATTTCATTGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAACCCGAGCTACGAATAC GTTTTCGCCGTAAACGATGCGGTGCACGAAGCCCCCGTCTACGTGGCATCGCAGAACAAGCTGTACCTCTCGCAG CTCGCGCCGCCGCCGGGCTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCCAACATTATCAGAATAC CTCTCCGATCCACCTGTCTATGCCCCCAATGGCGGAACATTCCATGACGGCAAAATCATCTGGGGCGCATCTGGC GGTAACAGATCGATTGGCGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGAGACAAACAAGACAACA AGCCTGGTCAACAATTACTTTGGATACTACTTCAACACAATTGACGACCTCGCCGTGCATCCCAAGACCGGCGAT ATCTGGTTCACAGATCCACAATACTCCTGGTTCAATGATATCACAGACACCCCTCCCCAGCTTCCCTGCGCTAGT TACAGATATAACACTTCTTCTGGGGCAGTGGTAGTTGTGGACGACTCAATCGGTCAGCCAAACGGGATCGCTTTC ACTCCGGATGGATCTATCGTGTACATCAGCGATACTGCGGCAGTCAGCGCTCCTATTGATCCTAAATATGGCCAT CCGGGCAGTACGTTTAATACCACGCATCGGCGGACTATTTACGCGTTTGACGTGAGCGAGGATGGTGCCCACGCT TACAACAAACGGGCCATTTATCTGGCACCAGGCTTTGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTATATT TTGACGGGGTGCGGTCGAGGTGTCGACGTTCTCGACCCCTCTGGGGAGCTGCTCTTGACGGTTCAGACCAACTAT ACGGTCCAGAATTTCGCTTGGACGGGTCCGGAACTGAAGACGCTATGGCTGATGGGCAATGGAGGAATCAGTAAG GTCGAATGGAACCTGCCCGGCCAAGTGTTGAAATAA |
Gene | >Ani_SJS100_1|g6050.t1 ATGCAAAGACTTCTGCTGTTGCTCGCATCATTCACGGGCAGTCTCGTTCACGCCCAAACTGGGGTTACCCATCCC ATCTCAGAGAAATGTGGCCGTTCGGTCGTCTGCGTCAATCGCTATGCAAATGTGCTTCCGTGAGTCCCTCGTAAA GGCTTGCTGAATCGACCGGGCAGTCATTAACAATCAGAATAGCTACCACTTCTTTCGCAATGTAAGCACCATGGA CACCGTCACGACCTTCGGTGATACCACCGTAGCAAACGGCACAGTGCTGCAAGACGTCAAGACCGCGGATTTCAT TGTGTATAACAAAGAGAAAGGACTCGATATTCTAGGCTCGAACCCGAGCTACGAATACGTTTTCGCCGTAAACGA TGCGGTGCACGAAGCCCCCGTCTACGTGGCATCGCAGAACAAGCTGTACCTCTCGCAGCTCGCGCCGCCGCCGGG CTATCTCCCGCAGCTGGTCATTGATCTCAACCAAGATCCTCCAACATTATCAGAATACCTCTCCGATCCACCTGT CTATGCCCCCAATGGCGGAACATTCCATGACGGCAAAATCATCTGGGGCGCATCTGGCGGTAACAGATCGATTGG CGGGACTGAACAACGGATCTCCCTTAGAACATTAGATCCCGAGACAAACAAGACAACAAGCCTGGTCAACAATTA CTTTGGATACTACTTCAACACAATTGACGACCTCGCCGTGCATCCCAAGACCGGCGATATCTGGTTCACAGATCC ACGTAAGTTCTACCATCTGCCATATGCTATGTGGATTTCGCTAATAATTATATACCCCAATGTACAGAATACTCC TGGTTCAATGATATCACAGACACCCCTCCCCAGCTTCCCTGCGCTAGTTACAGATATAACACTTCTTCTGGGGCA GTGGTAGTTGTGGACGACTCAATCGGTCAGCCAAACGGGATCGCTTTCACTCCGGATGGATCTATCGTGTACATC AGCGATACTGCGGCAGTCAGCGCTCCTATTGATCCTAAATATGGCCATCCGGGCAGTACGTTTAATACCACGCAT CGGCGGTATGTAGAGCCTGATTTCTGATATACTCGAAGACCCGAAAGTTGACTGACTCATCTCTTGTGTCCTTCT GTAGGACTATTTACGCGTTTGACGTGAGCGAGGATGGTGCCCACGCTTACAACAAACGGGCCATTTATCTGGCAC CAGGCTTTGTCCCCGACGGGCTGAAAGTGGCAGCGAACGGGTATATTTTGACGGGGTGCGGTCGAGGTGTCGACG TTCTCGACCCCTCTGGGGAGCTGCTCTTGACGGTTCAGACCAACTATACGGTCCAGAATTTCGCTTGGACGGGTC CGGAACTGAAGACGCTATGGCTGATGGGCAATGGAGGAATCAGTAAGGTCGAATGGAACCTGCCCGGCCAAGTGT TGAAATAA |