© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g605.t1 |
| Gene name | |
| Location | scaffold_002:477851..479106 |
| Strand | + |
| Gene length (bp) | 1255 |
| Transcript length (bp) | 1077 |
| Coding sequence length (bp) | 1077 |
| Protein length (aa) | 359 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00956 | NAP | Nucleosome assembly protein (NAP) | 3.7E-37 | 15 | 324 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006334 | nucleosome assembly | Yes |
| GO:0005634 | nucleus | Yes |
| GO:0043227 | membrane-bounded organelle | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0043226 | organelle | No |
| GO:0065003 | protein-containing complex assembly | No |
| GO:0009987 | cellular process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0043231 | intracellular membrane-bounded organelle | No |
| GO:0016043 | cellular component organization | No |
| GO:0006325 | chromatin organization | No |
| GO:0065004 | protein-DNA complex assembly | No |
| GO:0022607 | cellular component assembly | No |
| GO:0071824 | protein-DNA complex subunit organization | No |
| GO:0008150 | biological_process | No |
| GO:0043933 | protein-containing complex organization | No |
| GO:0043229 | intracellular organelle | No |
| GO:0034728 | nucleosome organization | No |
| GO:0005575 | cellular_component | No |
| GO:0006338 | chromatin remodeling | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 38 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g605.t1 MSAEEANTSLLERIQRPEVSKETAKKISLVEEQFARAEVEQLRQSTLLLRPLFEKRNQVIAEPDVRDTFWTRVML NAPAEVEEYITMTDATILASTLKNLTVERFEIDEKGQGEPRSFRLTFEFRTGDENPYFENEKLVKTFYWRKQVIT TPKGHKRTWDGLVSEPVRINWKKDQDPTKGLLDAACDLAEAEKKGGDRKKLPEFAKVIEKKDEIEAAEDQEMGDD EDELPEDGPGGMSFFAFFGYRGSDVTAEQSQAATKEDNERFEKLLKGEPVEGEDEEDEDDEDDDIEDEFDDIEVF PGGEELAIAIAEDLWPNALKYYVTDQAIEEVDFDDSELDISGDEEEDENDRPRKKTKV* |
| Coding | >Ani_SJS100_1|g605.t1 ATGTCTGCTGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGACGGCGAAG AAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGGAGCAGTTGCGCCAGTCTACTCTCCTGCTTCGT CCCCTTTTCGAAAAGCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTCGCGTCATGCTC AATGCGCCCGCCGAGGTGGAGGAATACATCACCATGACCGATGCCACGATCCTCGCTTCGACTCTTAAGAACCTG ACCGTTGAGCGATTCGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGC ACCGGCGACGAGAACCCTTACTTTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACT ACCCCCAAGGGTCACAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAG GATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAG CTGCCTGAGTTCGCCAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGATGGGTGATGAT GAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTC ACTGCTGAGCAGTCCCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTT GAGGGTGAGGATGAGGAGGACGAGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGACATTGAGGTCTTC CCTGGTGGTGAGGAGCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACTATGTCACGGAT CAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGATATCTCGGGAGACGAGGAAGAGGACGAGAACGAC CGTCCCCGCAAGAAGACCAAGGTCTAA |
| Transcript | >Ani_SJS100_1|g605.t1 ATGTCTGCTGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGACGGCGAAG AAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGGAGCAGTTGCGCCAGTCTACTCTCCTGCTTCGT CCCCTTTTCGAAAAGCGCAACCAGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTCGCGTCATGCTC AATGCGCCCGCCGAGGTGGAGGAATACATCACCATGACCGATGCCACGATCCTCGCTTCGACTCTTAAGAACCTG ACCGTTGAGCGATTCGAGATCGATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGC ACCGGCGACGAGAACCCTTACTTTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACT ACCCCCAAGGGTCACAAGCGCACCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAG GATCCTACCAAGGGTCTGCTGGACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAG CTGCCTGAGTTCGCCAAGGTCATTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGATGGGTGATGAT GAGGATGAGCTCCCTGAGGATGGCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTC ACTGCTGAGCAGTCCCAGGCCGCGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTT GAGGGTGAGGATGAGGAGGACGAGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGACATTGAGGTCTTC CCTGGTGGTGAGGAGCTCGCTATTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACTATGTCACGGAT CAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGATATCTCGGGAGACGAGGAAGAGGACGAGAACGAC CGTCCCCGCAAGAAGACCAAGGTCTAA |
| Gene | >Ani_SJS100_1|g605.t1 ATGTCTGCTGAGGAAGCTAACACGTCGCTGTTGGAGCGCATTCAGCGCCCCGAGGTGAGCAAGGAGACGGCGAAG AAGATTTCTTTGGTGGAGGAGCAGTTTGCTAGGGCGGAGGTGGAGCAGTGTATGTTCTTTCTTTCTTTCTATCTC TCTCTCTGTCTTTGTTTTTGTTGATTTATTTGGGGATGGGGGATTGGGTTTGGGATTGAGATTGTTATGGTTTGT TTGTGTCTAAACTAAAGGGTATAATAGTGCGCCAGTCTACTCTCCTGCTTCGTCCCCTTTTCGAAAAGCGCAACC AGGTTATCGCCGAGCCTGATGTGCGCGACACTTTCTGGACTCGCGTCATGCTCAATGCGCCCGCCGAGGTGGAGG AATACATCACCATGACCGATGCCACGATCCTCGCTTCGACTCTTAAGAACCTGACCGTTGAGCGATTCGAGATCG ATGAGAAGGGTCAGGGCGAGCCCCGCAGCTTCCGCTTGACCTTCGAGTTCCGCACCGGCGACGAGAACCCTTACT TTGAGAACGAGAAGCTTGTCAAGACCTTCTACTGGCGCAAGCAGGTCATCACTACCCCCAAGGGTCACAAGCGCA CCTGGGATGGTCTGGTCTCCGAGCCCGTCCGCATCAACTGGAAGAAGGACCAGGATCCTACCAAGGGTCTGCTGG ACGCTGCTTGCGACCTTGCTGAGGCGGAGAAGAAGGGCGGAGACCGTAAGAAGCTGCCTGAGTTCGCCAAGGTCA TTGAGAAGAAGGATGAGATTGAGGCTGCTGAGGACCAGGAGATGGGTGATGATGAGGATGAGCTCCCTGAGGATG GCCCTGGCGGCATGAGCTTCTTCGCTTTCTTCGGCTACCGTGGCAGCGATGTCACTGCTGAGCAGTCCCAGGCCG CGACCAAGGAGGATAACGAGAGGTTTGAGAAGCTCCTCAAGGGCGAGCCTGTTGAGGGTGAGGATGAGGAGGACG AGGATGACGAGGATGACGACATTGAGGATGAGTTCGATGACATTGAGGTCTTCCCTGGTGGTGAGGAGCTCGCTA TTGCGATCGCTGAGGACCTCTGGCCCAACGCCTTGAAGTACTATGGTGAGTGGTTTTCGTATATTGGATGAAGTC CGAGCTAACCTTCCTTCCAGTCACGGATCAGGCGATCGAGGAGGTCGACTTTGACGACAGTGAGCTTGATATCTC GGGAGACGAGGAAGAGGACGAGAACGACCGTCCCCGCAAGAAGACCAAGGTCTAA |