Protein ID | Ani_SJS100_1|g6024.t1 |
Gene name | |
Location | scaffold_035:306117..308057 |
Strand | + |
Gene length (bp) | 1940 |
Transcript length (bp) | 1632 |
Coding sequence length (bp) | 1632 |
Protein length (aa) | 544 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00615 | RGS | Regulator of G protein signaling domain | 8.1E-06 | 382 | 530 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 19 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 20 | 42 | 22 |
2 | 51 | 73 | 22 |
3 | 88 | 105 | 17 |
4 | 153 | 175 | 22 |
5 | 204 | 226 | 22 |
6 | 239 | 261 | 22 |
7 | 271 | 293 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g6024.t1 MGSELGVTAASTPQPAYTPVSIWWTCWTGAWTVIVASGMVYLIAHRNTPPLLLRGLGLSLSAVVMLHVYWASVQF GTIIGTIMPGDAEYWIMGTYLPCGIALFHASNSRFYHVAKLQEGYINRSSGGNDLSSTSRGKLGAVDRFRRLAYS TKVLVLLAVALLAQAFFTVLMWLISRIWHRTWGIPGTEVHGTEMQQKSAMGRGWEWWPGVFGQVFWSSIVGPVVL WKPRHIHDTHGWRVQTIGCVIANLPATPMWLIALYVPAMEPVNQYWLPPQWICLSIWVIEVFAVLLPCREVIRHH AIRQGAFDSIARWEPNTNPIADGSMARRSASILVELTGFGRESRSRSLGSSSSSRDSIFTKRALECVLARNPAPL QDFSAHRDFSGENIAFLTRVAEWKTSLPHAVWDSRISDYGDLTDLIQEQFHRALCIYTTFISDRHAQLPINISSQ ERKELENVFEGPAGLLFGDGRSVNPAVPFDSPGYGPPRPQRLRSPPSRPSPTFNATVFDRAENSIKDLVLTNTWP KFVRSCGIAAEVALLAES* |
Coding | >Ani_SJS100_1|g6024.t1 ATGGGATCCGAACTTGGGGTCACTGCCGCATCCACGCCCCAGCCAGCCTATACTCCGGTCAGTATATGGTGGACC TGCTGGACGGGCGCCTGGACGGTCATTGTTGCGTCTGGCATGGTCTATCTCATCGCCCATCGCAACACGCCTCCC CTCCTGCTTCGAGGCCTCGGGCTGTCGCTGTCCGCTGTTGTTATGCTCCATGTCTATTGGGCTTCAGTGCAGTTC GGAACCATAATTGGTACCATCATGCCGGGAGATGCCGAGTACTGGATCATGGGCACCTATCTGCCGTGTGGCATT GCCCTGTTCCACGCGTCGAACAGTCGGTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTAATCGCAGTAGT GGCGGAAATGATTTATCCTCCACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACAGT ACCAAGGTCCTCGTGCTTCTTGCGGTGGCGTTGCTCGCTCAGGCATTCTTTACGGTCTTGATGTGGCTTATCTCC CGCATATGGCACCGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGCAATG GGCCGGGGCTGGGAGTGGTGGCCTGGTGTGTTTGGACAGGTCTTCTGGTCGTCGATTGTGGGCCCCGTCGTTCTC TGGAAACCCCGTCACATCCATGACACCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCG GCGACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAG TGGATCTGCCTCTCTATCTGGGTGATAGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCAC GCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCCAATACCAACCCCATTGCCGATGGCTCCATG GCCCGCAGGTCAGCCTCCATTCTCGTCGAGCTCACAGGGTTTGGCCGTGAATCACGGAGTAGATCTCTTGGCTCC AGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTG CAGGATTTCTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGACC TCGCTGCCCCATGCGGTCTGGGATAGCAGGATCTCAGACTATGGAGATCTTACCGACTTGATTCAGGAGCAGTTT CACCGCGCGCTGTGTATTTACACGACGTTCATCAGTGACCGCCATGCGCAGTTACCGATCAACATCTCTTCGCAG GAACGGAAGGAGCTGGAGAATGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGCTCGGTCAATCCC GCCGTTCCGTTCGATTCGCCAGGCTATGGCCCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGT CCGACATTCAATGCGACGGTCTTTGACCGAGCCGAGAATAGCATCAAGGATCTCGTTCTCACCAACACGTGGCCT AAATTTGTTCGAAGTTGCGGCATCGCAGCCGAGGTTGCTTTGCTGGCGGAAAGCTAG |
Transcript | >Ani_SJS100_1|g6024.t1 ATGGGATCCGAACTTGGGGTCACTGCCGCATCCACGCCCCAGCCAGCCTATACTCCGGTCAGTATATGGTGGACC TGCTGGACGGGCGCCTGGACGGTCATTGTTGCGTCTGGCATGGTCTATCTCATCGCCCATCGCAACACGCCTCCC CTCCTGCTTCGAGGCCTCGGGCTGTCGCTGTCCGCTGTTGTTATGCTCCATGTCTATTGGGCTTCAGTGCAGTTC GGAACCATAATTGGTACCATCATGCCGGGAGATGCCGAGTACTGGATCATGGGCACCTATCTGCCGTGTGGCATT GCCCTGTTCCACGCGTCGAACAGTCGGTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTAATCGCAGTAGT GGCGGAAATGATTTATCCTCCACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACAGT ACCAAGGTCCTCGTGCTTCTTGCGGTGGCGTTGCTCGCTCAGGCATTCTTTACGGTCTTGATGTGGCTTATCTCC CGCATATGGCACCGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGCAATG GGCCGGGGCTGGGAGTGGTGGCCTGGTGTGTTTGGACAGGTCTTCTGGTCGTCGATTGTGGGCCCCGTCGTTCTC TGGAAACCCCGTCACATCCATGACACCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATCGCCAATCTCCCG GCGACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAG TGGATCTGCCTCTCTATCTGGGTGATAGAGGTTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTGATACGCCATCAC GCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCCAATACCAACCCCATTGCCGATGGCTCCATG GCCCGCAGGTCAGCCTCCATTCTCGTCGAGCTCACAGGGTTTGGCCGTGAATCACGGAGTAGATCTCTTGGCTCC AGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTG CAGGATTTCTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGACC TCGCTGCCCCATGCGGTCTGGGATAGCAGGATCTCAGACTATGGAGATCTTACCGACTTGATTCAGGAGCAGTTT CACCGCGCGCTGTGTATTTACACGACGTTCATCAGTGACCGCCATGCGCAGTTACCGATCAACATCTCTTCGCAG GAACGGAAGGAGCTGGAGAATGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGCTCGGTCAATCCC GCCGTTCCGTTCGATTCGCCAGGCTATGGCCCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATCAAGGCCGAGT CCGACATTCAATGCGACGGTCTTTGACCGAGCCGAGAATAGCATCAAGGATCTCGTTCTCACCAACACGTGGCCT AAATTTGTTCGAAGTTGCGGCATCGCAGCCGAGGTTGCTTTGCTGGCGGAAAGCTAG |
Gene | >Ani_SJS100_1|g6024.t1 ATGGGATCCGAACTTGGGGTCACTGCCGCATCCACGCCCCAGCCAGCCTATACTCCGGTCAGTATATGGTGGACC TGCTGGACGGGCGCCTGGACGGTCATTGTTGCGTCTGGCATGGTCTATCTCATCGCCCATCGCAACACGCCTCCC CTCCTGCTTCGAGGCCTCGGGCTGTCGCTGTCCGCTGTTGTTATGCTCCATGTCTATTGGGCTTCAGTGCAGTTC GGAACCATAATTGGTACCATCATGCCGGGAGATGCCGAGTACTGGATCATGGGCACCTATCTGCCGTGTGGCATT GCCCTGTTCCACGCGTCGAACAGTCGGTTCTACCATGTGGCAAAGCTTCAGGAAGGCTATATTAATCGCAGTAGT GGCGGAAATGATTTATCCTCCACCTCGAGGGGCAAGCTCGGTGCCGTAGACCGGTTCCGTCGCCTTGCATACAGT ACCAAGGTCCTCGTGCTTCTTGCGGTGGCGTTGCTCGCTCAGGTAAAACGGCCACCGCCTACTCCTATTGACAAT CGTATCAGTCTAATAGAATCTATAGGCATTCTTTACGGTCTTGATGTGGCTTATCTCCCGCATATGGCACCGCAC TTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGCAATGGGCCGGGGCTGGGAGTG GTAAGTAGACCTTCCAACATGCGCCCGGCACATATACGACGAGAGCTGTGCGCTAACCAATTTGCAGGTGGCCTG GTGTGTTTGGACAGGTCTTCTGGTCGTCGATTGTGGGCCCCGTCGTTCTCTGGAAACCCCGTCACATCCATGACA CCCACGGCTGGCGAGTCCAGACGATAGGCTGCGTCATCGCCAAGTGAGTCAATCGGTCCGATGAGGTCTGTCGCG CGACTAACCCGTCATCTAGTCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGG TCAATCAGTACTGGCTACCGCCCCAGTGGTAGGTGCTCCAAGCTGCGACCAACAGGAAAATAGAAATGAACAAGA AAGAAGCGAGAAAACGGAGCTGACACCTGTAGGATCTGCCTCTCTATCTGGGTGATAGAGGTTTTTGCTGTTCTC CTGCCGTGCCGGGAGGTGATACGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCC AATACCAACCCCATTGCCGATGGCTCCATGGCCCGCAGGTCAGCCTCCATTCTCGTCGAGCTCACAGGGTTTGGC CGTGAATCACGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAA TGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCT TTCCTGACCCGAGTGGCAGAATGGAAGACCTCGCTGCCCCATGCGGTCTGGGATAGCAGGATCTCAGACTATGGA GATCTTACCGACTTGATTCAGGAGCAGTTTCACCGCGCGCTGTGTATTTACACGACGTTCATCAGTGACCGCCAT GCGCAGTTACCGATCAACATCTCTTCGCAGGAACGGAAGGAGCTGGAGAATGTCTTTGAGGGCCCTGCTGGGCTT CTCTTCGGAGACGGGCGCTCGGTCAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGGCCCCCCACGCCCTCAG CGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGGTTCGCTATTCACCAACAATGGCCAGGTGCAATACTGGGGCG AGATTCCCCAGACATTCAATGCGACGGTCTTTGACCGAGCCGAGAATAGCATCAAGGATCTCGTTCTCACCAACA CGTGGCCTAAATTTGTTCGAAGTTGCGGCATCGCAGCCGAGGTTGCTTTGCTGGCGGAAAGCTAG |