Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g601.t1
Gene name
Locationscaffold_002:463115..464861
Strand+
Gene length (bp)1746
Transcript length (bp)1689
Coding sequence length (bp)1689
Protein length (aa) 563

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11951 Fungal_trans_2 Fungal specific transcription factor domain 2.0E-08 111 261
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 2.1E-06 16 46

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008270 zinc ion binding Yes
GO:0043167 ion binding No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0050789 regulation of biological process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0065007 biological regulation No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0051252 regulation of RNA metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0050794 regulation of cellular process No
GO:0043169 cation binding No
GO:0019222 regulation of metabolic process No
GO:0046914 transition metal ion binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0008150 biological_process No
GO:0010468 regulation of gene expression No
GO:0046872 metal ion binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

Domain # Start End Length
1 186 203 17

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g601.t1
MESEKKRRASKPKVKTGCRTCKIRRVKCDEGRPACKRCVSTGRVCDGYGVWSEAKKPTVDGNTGAPRAFQSLLSS
YNAPVPIPHAACAERKYVEWFIQCTIFKIGGVFSSQFWGRTVVQALSQELAVRHAVLALASTHKYRTQRSVRGTA
TAGHLSEHEKFTLQHYNKAIGCLQAEIRRNNKRTQSMIVALITCMVFVTLEMMRGQYRTSHTHLQHGLKLVKEIQ
RLSGAPKTGRIRIRTSSQTNEDDVIEVFSRLEVHYSLLGHGTKYSNLDYDVQPRHLPYRFPSIEQARQYLDVLLA
RAQGLVEMGRHIETDMFVATQGYQQFLESQWHLEKDLEVWLDVYRSSLGKFSAQDLIQNTLARGLLGMYHAMALI
MVTTCIPWDDETAFDLQTDGFMSIIREAIGICQALKIAYPDFPTSGSLNCPLGMAFTMDIGFIQPLYYTAIKCRI
PQIRRHAIELLRLAPHREGIWNGILTARIAEEVVAYEEWTIDASLTLAKSSDLLSLPEAGDSLTVLPYLCRISDV
RVELPDENTGEATVAFWQREDGRSWKVDERKFQTEDP*
Coding >Ani_SJS100_1|g601.t1
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAAATTCGTCGA
GTCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTATGGGGTT
TGGAGTGAAGCGAAAAAGCCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGT
TACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCAGTGTACC
ATTTTCAAAATTGGAGGAGTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTA
GCAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGTGTTAGAGGTACTGCA
ACGGCAGGTCATCTAAGCGAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCT
GAAATAAGACGCAACAATAAACGAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGTGACTCTC
GAAATGATGCGAGGCCAATACCGAACAAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAAGGAGATTCAG
AGGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAAGGACTTCGTCACAAACAAATGAGGATGATGTTATC
GAGGTCTTTAGCAGACTGGAAGTGCACTATTCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGAC
GTTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGTTCTGCTGGCA
AGAGCACAGGGTCTGGTGGAAATGGGGCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAG
TTTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACTTGGTAAA
TTCTCAGCTCAAGATCTCATTCAGAATACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCATGGCCTTGATC
ATGGTCACGACCTGCATCCCATGGGACGACGAAACGGCATTTGACCTACAAACCGACGGGTTCATGTCGATTATT
CGTGAGGCAATCGGCATCTGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGC
CCGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTGCCGGATT
CCTCAGATCCGACGACACGCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATTCTT
ACTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGTGGACTATCGATGCAAGCCTTACTCTGGCAAAGAGC
TCAGATCTCCTCAGCTTGCCAGAGGCGGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAATCTCAGATGTT
CGAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCGTGGCTTTCTGGCAGCGCGAAGACGGTAGAAGCTGG
AAGGTTGATGAGAGAAAATTCCAGACGGAGGATCCATAA
Transcript >Ani_SJS100_1|g601.t1
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAAATTCGTCGA
GTCAAATGCGACGAGGGTCGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTATGGGGTT
TGGAGTGAAGCGAAAAAGCCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGT
TACAATGCACCGGTCCCAATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCAGTGTACC
ATTTTCAAAATTGGAGGAGTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTA
GCAGTACGGCATGCTGTTTTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGTGTTAGAGGTACTGCA
ACGGCAGGTCATCTAAGCGAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCT
GAAATAAGACGCAACAATAAACGAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGTGACTCTC
GAAATGATGCGAGGCCAATACCGAACAAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAAGGAGATTCAG
AGGCTCTCCGGAGCCCCTAAGACCGGAAGAATTCGGATAAGGACTTCGTCACAAACAAATGAGGATGATGTTATC
GAGGTCTTTAGCAGACTGGAAGTGCACTATTCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGAC
GTTCAACCTCGTCACTTACCGTACAGATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGTTCTGCTGGCA
AGAGCACAGGGTCTGGTGGAAATGGGGCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAG
TTTCTCGAGTCTCAATGGCACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACTTGGTAAA
TTCTCAGCTCAAGATCTCATTCAGAATACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCATGGCCTTGATC
ATGGTCACGACCTGCATCCCATGGGACGACGAAACGGCATTTGACCTACAAACCGACGGGTTCATGTCGATTATT
CGTGAGGCAATCGGCATCTGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGC
CCGTTGGGAATGGCTTTTACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTGCCGGATT
CCTCAGATCCGACGACACGCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATTCTT
ACTGCTAGGATTGCGGAGGAGGTAGTTGCTTATGAAGAGTGGACTATCGATGCAAGCCTTACTCTGGCAAAGAGC
TCAGATCTCCTCAGCTTGCCAGAGGCGGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAATCTCAGATGTT
CGAGTCGAATTGCCCGATGAAAACACAGGAGAGGCTACCGTGGCTTTCTGGCAGCGCGAAGACGGTAGAAGCTGG
AAGGTTGATGAGAGAAAATTCCAGACGGAGGATCCATAA
Gene >Ani_SJS100_1|g601.t1
ATGGAATCCGAGAAGAAGCGCCGTGCGAGCAAACCTAAAGTCAAAACAGGCTGTCGGACATGCAAGTGAGTTGGG
CGGCTGCCTTGTTACACAAGTTGGTGTGGTGCTTATTCTATACACAGAATTCGTCGAGTCAAATGCGACGAGGGT
CGACCGGCTTGCAAGAGATGCGTATCAACTGGCCGAGTCTGCGATGGCTATGGGGTTTGGAGTGAAGCGAAAAAG
CCCACCGTCGACGGCAATACTGGCGCACCAAGAGCCTTCCAGAGTCTGCTGTCTAGTTACAATGCACCGGTCCCA
ATTCCTCATGCCGCATGTGCTGAGCGGAAATATGTGGAATGGTTCATCCAGTGTACCATTTTCAAAATTGGAGGA
GTGTTTTCTTCCCAATTCTGGGGCAGAACCGTTGTTCAAGCACTTTCTCAAGAGCTAGCAGTACGGCATGCTGTT
TTGGCATTGGCCTCTACGCATAAATATAGGACTCAGAGGAGTGTTAGAGGTACTGCAACGGCAGGTCATCTAAGC
GAGCATGAGAAATTCACTCTCCAGCACTACAACAAAGCGATTGGCTGTCTCCAAGCTGAAATAAGACGCAACAAT
AAACGAACGCAGAGTATGATAGTTGCCCTCATTACTTGCATGGTTTTCGTGACTCTCGAAATGATGCGAGGCCAA
TACCGAACAAGTCATACTCATCTACAGCACGGGCTGAAGCTGGTGAAGGAGATTCAGAGGCTCTCCGGAGCCCCT
AAGACCGGAAGAATTCGGATAAGGACTTCGTCACAAACAAATGAGGATGATGTTATCGAGGTCTTTAGCAGACTG
GAAGTGCACTATTCTCTACTTGGACATGGGACGAAGTACTCGAACCTTGACTATGACGTTCAACCTCGTCACTTA
CCGTACAGATTTCCATCAATTGAACAAGCAAGGCAATATCTGGATGTTCTGCTGGCAAGAGCACAGGGTCTGGTG
GAAATGGGGCGTCACATCGAGACGGACATGTTTGTTGCGACTCAGGGCTACCAGCAGTTTCTCGAGTCTCAATGG
CACCTGGAAAAGGACTTGGAAGTATGGCTTGATGTTTATCGATCGTCACTTGGTAAATTCTCAGCTCAAGATCTC
ATTCAGAATACCTTGGCTAGGGGGTTACTCGGGATGTACCATGCCATGGCCTTGATCATGGTCACGACCTGCATC
CCATGGGACGACGAAACGGCATTTGACCTACAAACCGACGGGTTCATGTCGATTATTCGTGAGGCAATCGGCATC
TGTCAAGCCCTCAAAATCGCATATCCAGATTTCCCCACGAGTGGATCTCTCAATTGCCCGTTGGGAATGGCTTTT
ACGATGGACATTGGCTTCATCCAGCCATTATATTATACCGCAATTAAGTGCCGGATTCCTCAGATCCGACGACAC
GCGATCGAATTGCTTCGATTGGCACCGCACCGTGAAGGCATATGGAATGGCATTCTTACTGCTAGGATTGCGGAG
GAGGTAGTTGCTTATGAAGAGTGGACTATCGATGCAAGCCTTACTCTGGCAAAGAGCTCAGATCTCCTCAGCTTG
CCAGAGGCGGGTGATTCACTTACAGTCTTGCCTTATCTGTGCCGAATCTCAGATGTTCGAGTCGAATTGCCCGAT
GAAAACACAGGAGAGGCTACCGTGGCTTTCTGGCAGCGCGAAGACGGTAGAAGCTGGAAGGTTGATGAGAGAAAA
TTCCAGACGGAGGATCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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