© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g598.t1 |
| Gene name | |
| Location | scaffold_002:454718..456414 |
| Strand | + |
| Gene length (bp) | 1696 |
| Transcript length (bp) | 1557 |
| Coding sequence length (bp) | 1557 |
| Protein length (aa) | 519 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 5.7E-53 | 45 | 488 |
| PF00324 | AA_permease | Amino acid permease | 2.5E-17 | 56 | 496 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 45 | 64 | 19 |
| 2 | 68 | 90 | 22 |
| 3 | 132 | 154 | 22 |
| 4 | 169 | 188 | 19 |
| 5 | 201 | 223 | 22 |
| 6 | 243 | 265 | 22 |
| 7 | 278 | 300 | 22 |
| 8 | 330 | 352 | 22 |
| 9 | 383 | 402 | 19 |
| 10 | 412 | 434 | 22 |
| 11 | 447 | 469 | 22 |
| 12 | 479 | 501 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g598.t1 MSGLDLEKKLSVNQASTGENASGSEDADALKLAEMGYTQDLQRNFSLLSLVGIAFCMSNSWFGISASLITGISSG GTVLIVYGLLWITFISTCVAASLSELASSMPNAGGQYFWANELAPKKYARFFSYLTGWFGYAGAIFASASVALSL GSGVVGMWQLGHPSFVPKAWHTVVAYQLINFFCYLFNCWGKTLPAVAKATLYISLLSFLVILIVVPACANPHASG SYVFGHFVNSTGWKSDGIAFIVGLINPNWIFACLDSATHLAEEVPQPEKNIPVAIMATVGIGFVTSWTYCIAMFF SLQDLDALLNTATGVPILELYYQALKNRAGAIVLETLLVVTGMGCLIACHTWQSRLAWAFARDRGMPGHQLLSKV NMTLDVPLHAHNASAFIVAVLGLLYLGSSTAFNSMVTACISLLYISYSIPVICLLYVGRDNIKHGPFWLGKWGLA ANIVTLAWTLFCLVMYSFPATMPVTTGNMNYVSAVYGVVVFIVLCDWFARGRRSFRGSQSCVEGESAE* |
| Coding | >Ani_SJS100_1|g598.t1 ATGAGTGGTCTCGATCTAGAAAAGAAGTTGAGCGTTAACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTGAA GATGCAGATGCGCTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTGCAGCGCAATTTCTCCCTGCTATCCCTG GTCGGCATTGCGTTTTGTATGTCAAACTCTTGGTTCGGTATCTCAGCATCCTTGATCACCGGTATCAGCTCTGGA GGTACCGTCCTCATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCGACTTGTGTCGCTGCCTCCCTCTCGGAA CTGGCTAGCTCCATGCCCAATGCCGGTGGGCAATACTTCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCCGG TTCTTCTCCTATCTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTCGCGAGTGCCAGTGTTGCTCTCAGTCTT GGATCCGGTGTTGTGGGAATGTGGCAACTTGGCCATCCGTCATTTGTTCCCAAAGCCTGGCATACTGTAGTAGCA TACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACTGTTGGGGCAAAACCCTGCCTGCTGTGGCAAAAGCAACG CTGTACATCTCGTTGCTTTCTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCCGCATGCCAGTGGA TCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCTGGAAATCAGATGGAATCGCTTTCATTGTCGGCTTGATC AACCCGAACTGGATCTTTGCCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCAGCCCGAGAAGAAC ATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTTTCGTTACCTCATGGACCTACTGTATTGCGATGTTTTTC AGTCTCCAAGACCTTGATGCACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTACTACCAGGCTCTG AAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCCTAGTAGTGACGGGTATGGGTTGCTTGATTGCCTGCCAC ACTTGGCAGTCACGTCTTGCCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACTGCTCTCCAAGGTC AACATGACCTTGGATGTCCCCTTACATGCCCACAACGCCAGCGCATTCATTGTTGCTGTTCTCGGCCTGCTCTAC TTGGGATCCTCTACCGCTTTCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTCGTACTCTATCCCC GTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCAAGCACGGTCCATTCTGGCTGGGCAAGTGGGGTCTTGCT GCGAACATTGTCACCCTGGCATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGACTATGCCAGTCACA ACAGGAAATATGAACTATGTTTCGGCCGTTTATGGCGTCGTTGTCTTCATTGTTCTGTGTGACTGGTTTGCACGA GGAAGACGTTCATTCCGAGGCAGCCAGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAA |
| Transcript | >Ani_SJS100_1|g598.t1 ATGAGTGGTCTCGATCTAGAAAAGAAGTTGAGCGTTAACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTGAA GATGCAGATGCGCTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTGCAGCGCAATTTCTCCCTGCTATCCCTG GTCGGCATTGCGTTTTGTATGTCAAACTCTTGGTTCGGTATCTCAGCATCCTTGATCACCGGTATCAGCTCTGGA GGTACCGTCCTCATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCGACTTGTGTCGCTGCCTCCCTCTCGGAA CTGGCTAGCTCCATGCCCAATGCCGGTGGGCAATACTTCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCCGG TTCTTCTCCTATCTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTCGCGAGTGCCAGTGTTGCTCTCAGTCTT GGATCCGGTGTTGTGGGAATGTGGCAACTTGGCCATCCGTCATTTGTTCCCAAAGCCTGGCATACTGTAGTAGCA TACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACTGTTGGGGCAAAACCCTGCCTGCTGTGGCAAAAGCAACG CTGTACATCTCGTTGCTTTCTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCCGCATGCCAGTGGA TCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCTGGAAATCAGATGGAATCGCTTTCATTGTCGGCTTGATC AACCCGAACTGGATCTTTGCCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCAGCCCGAGAAGAAC ATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTTTCGTTACCTCATGGACCTACTGTATTGCGATGTTTTTC AGTCTCCAAGACCTTGATGCACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTACTACCAGGCTCTG AAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCCTAGTAGTGACGGGTATGGGTTGCTTGATTGCCTGCCAC ACTTGGCAGTCACGTCTTGCCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACTGCTCTCCAAGGTC AACATGACCTTGGATGTCCCCTTACATGCCCACAACGCCAGCGCATTCATTGTTGCTGTTCTCGGCCTGCTCTAC TTGGGATCCTCTACCGCTTTCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTCGTACTCTATCCCC GTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCAAGCACGGTCCATTCTGGCTGGGCAAGTGGGGTCTTGCT GCGAACATTGTCACCCTGGCATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGACTATGCCAGTCACA ACAGGAAATATGAACTATGTTTCGGCCGTTTATGGCGTCGTTGTCTTCATTGTTCTGTGTGACTGGTTTGCACGA GGAAGACGTTCATTCCGAGGCAGCCAGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAA |
| Gene | >Ani_SJS100_1|g598.t1 ATGAGTGGTCTCGATCTAGAAAAGAAGTTGAGCGTTAACCAGGCCTCAACCGGCGAGAATGCGTCTGGATCTGAA GATGCAGATGCGCTTAAGCTGGCTGAGATGGGTTACACGCAGGACCTGCAGCGCAATTTCTCCCTGCTATCCCTG GTCGGCATTGCGTTTTGTATGTCAAACTCTTGGTTCGGTATCTCAGCATCCTTGATCACCGGTATCAGCTCTGGA GGTACCGTCCTCATCGTTTACGGCTTGCTCTGGATCACCTTTATCTCGACTTGTGTCGCTGCCTCCCTCTCGGAA CTGGCTAGCTCCATGCCCAATGCCGGTGGGCAATACTTCTGGGCGAACGAGCTTGCTCCGAAGAAATATGCCCGG TTCTTCTCCTATCTTACCGGTTGGTTCGGATACGCTGGTGCCATTTTCGCGAGTGCCAGTGTTGCTCTCAGTCTT GGATCCGGTGTTGTGGGAATGTGGCAACTTGGCCATCCGTCATTGTATGCTTCCAAAATCCCAGATCTGTTCCCT GAGAGGAAATGTCTTCCGCTCTAGGTCCGTAGTGCTGACTCCAATCACAGTGTTCCCAAAGCCTGGCATACTGTA GTAGCATACCAGCTCATCAACTTCTTCTGCTACCTCTTCAACTGTTGGGGCAAAACCCTGCCTGCTGTGGCAAAA GCAACGCTGTACATCTCGTTGCTTTCTTTCCTGGTCATCCTTATTGTTGTCCCGGCTTGCGCCAACCCGCATGCC AGTGGATCCTATGTTTTCGGGCATTTCGTCAACTCCACTGGCTGGAAATCAGATGGAATCGCTTTCATTGTCGGC TTGATCAACCCGAACTGGATCTTTGCCTGCTTGGATTCGGCCACTCATCTTGCCGAAGAGGTGCCGCAGCCCGAG AAGAACATTCCTGTTGCGATCATGGCCACCGTCGGCATTGGTTTCGTTACCTCATGGACCTACTGTATTGCGATG TTTTTCAGTCTCCAAGACCTTGATGCACTTTTGAACACCGCCACAGGAGTGCCCATCCTGGAACTTTACTACCAG GCTCTGAAGAACAGGGCAGGTGCAATTGTTCTGGAAACCCTCCTAGTAGTGACGGGTATGGGTTGCTTGATTGCC TGCCACACTTGGCAGTCACGTCTTGCCTGGGCCTTCGCTCGTGATCGCGGTATGCCTGGACATCAACTGCTCTCC AAGGTCAACATGACCTTGGATGTCCCCTTACATGCCCACAACGCCAGCGCATTCATTGTTGCTGTTCTCGGCCTG CTCTACTTGGGATCCTCTACCGCTTTCAACAGCATGGTCACGGCGTGCATCTCGCTTCTGTACATTTCGTACTCT ATCCCCGTTATCTGCCTTTTGTATGTTGGTCGCGACAACATCAAGCACGGTCCATTCTGGCTGGGCAAGTGGGGT CTTGCTGCGAACATTGTCACCCTGGCATGGACTCTTTTCTGTCTCGTTATGTACTCATTCCCTGCGACTATGCCA GTCACAACAGGAAGTAAGTATTCATGTCAACCAATCATATACGATGAATGAAGTGACTAACAAGACTGCAGATAT GAACTATGTTTCGGCCGTTTATGGCGTCGTTGTCTTCATTGTTCTGTGTGACTGGTTTGCACGAGGAAGACGTTC ATTCCGAGGCAGCCAGAGTTGTGTGGAAGGAGAAAGTGCCGAGTAA |