© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5977.t1 |
| Gene name | |
| Location | scaffold_035:139910..141186 |
| Strand | - |
| Gene length (bp) | 1276 |
| Transcript length (bp) | 1197 |
| Coding sequence length (bp) | 1197 |
| Protein length (aa) | 399 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01255 | Prenyltransf | Putative undecaprenyl diphosphate synthase | 3.3E-82 | 47 | 367 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | Yes |
| GO:0016740 | transferase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 17 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5977.t1 MSTSIHLSRFRKWLLASPPIEFAIGQLRDLLVGAIRQGPVPQHIAFVMDGNRRFARTHGIETVEGHNMGFEALAR ILEVCYKSGVKVVTIYAFSIENFKRSKFEVDALMEMARVKLSQMAQHGEILDRYGAKVRILGRLDLLRPDVLAAV NRAVEMTSNNGDCVLNICFPYTSRDEITTAVRDTVAEYSQPLPSTRPSSISSRTPFSESHITQNIRAQAQVSKGE EVPSDSEAASESSGDGETTKHKTPNGVYENGSSFSSSSTLHLAGQQDAASGKAPATEPAVGKESLVFMSPETITR QTLSEHLFTHDNPPLDLLVRTSGVERLSDFMLWQCHEDTEIVFLDVLWPDFDLWQFLPVMLRWQRRISKSKKNPD AEGNFDGETSDSAEETNGKVKDL* |
| Coding | >Ani_SJS100_1|g5977.t1 ATGTCGACATCGATACACTTGTCGAGGTTCCGGAAATGGCTCCTTGCTTCGCCGCCAATCGAGTTTGCCATTGGC CAACTCCGGGACCTCTTGGTTGGAGCAATCCGTCAGGGTCCAGTTCCACAACATATTGCCTTTGTCATGGATGGT AACCGGAGATTTGCCCGAACGCACGGGATTGAAACCGTAGAAGGACACAACATGGGGTTTGAGGCTTTGGCAAGG ATTCTCGAAGTCTGTTACAAGAGTGGCGTCAAAGTGGTTACAATCTACGCCTTCAGCATCGAAAACTTCAAACGC TCCAAATTCGAGGTGGATGCATTGATGGAGATGGCCAGGGTGAAGTTGTCGCAGATGGCTCAGCACGGTGAGATT CTGGATCGCTACGGGGCCAAGGTGCGGATATTGGGTCGGCTGGACTTGCTCAGGCCGGATGTTCTTGCTGCAGTG AACCGGGCCGTCGAAATGACCAGTAACAACGGTGACTGCGTATTGAACATCTGTTTCCCGTACACATCGCGCGAT GAGATTACCACGGCTGTTCGAGATACCGTGGCTGAGTACAGCCAGCCTCTTCCGTCGACTCGTCCGTCGTCCATC TCCTCGAGGACGCCCTTCTCAGAATCCCACATTACACAAAACATCCGAGCACAGGCGCAGGTTTCGAAAGGAGAG GAGGTACCGAGTGACTCGGAGGCGGCATCAGAGTCATCAGGAGACGGCGAAACGACGAAGCACAAGACACCGAAC GGAGTCTATGAAAATGGATCTTCGTTCTCTTCCTCGTCGACTCTCCATCTCGCCGGTCAACAAGATGCTGCCAGT GGGAAAGCCCCAGCAACGGAGCCCGCCGTCGGGAAAGAGAGTCTCGTCTTTATGTCCCCCGAGACGATCACGCGT CAGACGTTGTCAGAACATCTATTCACCCATGACAATCCTCCTTTAGATCTGCTGGTCCGGACATCTGGAGTTGAG CGCTTGAGTGACTTCATGCTTTGGCAATGCCACGAGGATACGGAGATCGTCTTCCTTGATGTCCTGTGGCCGGAC TTTGACCTTTGGCAGTTCCTGCCCGTGATGCTGAGATGGCAGCGTCGAATCTCCAAGTCAAAGAAGAACCCGGAT GCAGAGGGGAACTTCGACGGCGAAACATCTGACTCTGCGGAGGAAACTAATGGCAAGGTTAAAGATCTGTAG |
| Transcript | >Ani_SJS100_1|g5977.t1 ATGTCGACATCGATACACTTGTCGAGGTTCCGGAAATGGCTCCTTGCTTCGCCGCCAATCGAGTTTGCCATTGGC CAACTCCGGGACCTCTTGGTTGGAGCAATCCGTCAGGGTCCAGTTCCACAACATATTGCCTTTGTCATGGATGGT AACCGGAGATTTGCCCGAACGCACGGGATTGAAACCGTAGAAGGACACAACATGGGGTTTGAGGCTTTGGCAAGG ATTCTCGAAGTCTGTTACAAGAGTGGCGTCAAAGTGGTTACAATCTACGCCTTCAGCATCGAAAACTTCAAACGC TCCAAATTCGAGGTGGATGCATTGATGGAGATGGCCAGGGTGAAGTTGTCGCAGATGGCTCAGCACGGTGAGATT CTGGATCGCTACGGGGCCAAGGTGCGGATATTGGGTCGGCTGGACTTGCTCAGGCCGGATGTTCTTGCTGCAGTG AACCGGGCCGTCGAAATGACCAGTAACAACGGTGACTGCGTATTGAACATCTGTTTCCCGTACACATCGCGCGAT GAGATTACCACGGCTGTTCGAGATACCGTGGCTGAGTACAGCCAGCCTCTTCCGTCGACTCGTCCGTCGTCCATC TCCTCGAGGACGCCCTTCTCAGAATCCCACATTACACAAAACATCCGAGCACAGGCGCAGGTTTCGAAAGGAGAG GAGGTACCGAGTGACTCGGAGGCGGCATCAGAGTCATCAGGAGACGGCGAAACGACGAAGCACAAGACACCGAAC GGAGTCTATGAAAATGGATCTTCGTTCTCTTCCTCGTCGACTCTCCATCTCGCCGGTCAACAAGATGCTGCCAGT GGGAAAGCCCCAGCAACGGAGCCCGCCGTCGGGAAAGAGAGTCTCGTCTTTATGTCCCCCGAGACGATCACGCGT CAGACGTTGTCAGAACATCTATTCACCCATGACAATCCTCCTTTAGATCTGCTGGTCCGGACATCTGGAGTTGAG CGCTTGAGTGACTTCATGCTTTGGCAATGCCACGAGGATACGGAGATCGTCTTCCTTGATGTCCTGTGGCCGGAC TTTGACCTTTGGCAGTTCCTGCCCGTGATGCTGAGATGGCAGCGTCGAATCTCCAAGTCAAAGAAGAACCCGGAT GCAGAGGGGAACTTCGACGGCGAAACATCTGACTCTGCGGAGGAAACTAATGGCAAGGTTAAAGATCTGTAG |
| Gene | >Ani_SJS100_1|g5977.t1 ATGTCGACATCGATACACTTGTCGAGGTTCCGGAAATGGCTCCTTGCTTCGCCGCCAATCGAGTTTGCCATTGGC CAACTCCGGGACCTCTTGGTTGGAGCAATCCGTCAGGGTCCAGTTCCACAACATATTGCCTTTGTCATGGATGGT AACCGGAGATTTGCCCGAACGCACGGGATTGAAACCGTAGAAGGACACAACATGGGGTTTGAGGCTTTGGCAAGG GTGAGTCCGATGGAGTTCGGTTCATGGATAACTTTTGCCTTCCGCCAATATCAGCTGCTGACTTATACCGATGAT TTAGATTCTCGAAGTCTGTTACAAGAGTGGCGTCAAAGTGGTTACAATCTACGCCTTCAGCATCGAAAACTTCAA ACGCTCCAAATTCGAGGTGGATGCATTGATGGAGATGGCCAGGGTGAAGTTGTCGCAGATGGCTCAGCACGGTGA GATTCTGGATCGCTACGGGGCCAAGGTGCGGATATTGGGTCGGCTGGACTTGCTCAGGCCGGATGTTCTTGCTGC AGTGAACCGGGCCGTCGAAATGACCAGTAACAACGGTGACTGCGTATTGAACATCTGTTTCCCGTACACATCGCG CGATGAGATTACCACGGCTGTTCGAGATACCGTGGCTGAGTACAGCCAGCCTCTTCCGTCGACTCGTCCGTCGTC CATCTCCTCGAGGACGCCCTTCTCAGAATCCCACATTACACAAAACATCCGAGCACAGGCGCAGGTTTCGAAAGG AGAGGAGGTACCGAGTGACTCGGAGGCGGCATCAGAGTCATCAGGAGACGGCGAAACGACGAAGCACAAGACACC GAACGGAGTCTATGAAAATGGATCTTCGTTCTCTTCCTCGTCGACTCTCCATCTCGCCGGTCAACAAGATGCTGC CAGTGGGAAAGCCCCAGCAACGGAGCCCGCCGTCGGGAAAGAGAGTCTCGTCTTTATGTCCCCCGAGACGATCAC GCGTCAGACGTTGTCAGAACATCTATTCACCCATGACAATCCTCCTTTAGATCTGCTGGTCCGGACATCTGGAGT TGAGCGCTTGAGTGACTTCATGCTTTGGCAATGCCACGAGGATACGGAGATCGTCTTCCTTGATGTCCTGTGGCC GGACTTTGACCTTTGGCAGTTCCTGCCCGTGATGCTGAGATGGCAGCGTCGAATCTCCAAGTCAAAGAAGAACCC GGATGCAGAGGGGAACTTCGACGGCGAAACATCTGACTCTGCGGAGGAAACTAATGGCAAGGTTAAAGATCTGTA G |