Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5946.t1
Gene name
Locationscaffold_035:21584..22349
Strand-
Gene length (bp)765
Transcript length (bp)651
Coding sequence length (bp)651
Protein length (aa) 217

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03357 Snf7 Snf7 1.0E-43 12 191

GO

GO Term Description Terminal node
GO:0007034 vacuolar transport Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0051179 localization No
GO:0009987 cellular process No
GO:0051649 establishment of localization in cell No
GO:0051641 cellular localization No
GO:0046907 intracellular transport No
GO:0006810 transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5946.t1
MNRLFGTKNTAPKPTLDGAITNVETRISSIDVKLAALNSELSTYQTKISKMRDGPGKTALRQKALKVLQRRKQYE
AQRDQLSQQSWNMEQAGMMQDNLKNVMTTVDAMKTTTKTLKKQYGQIDIDKIERLQDEMADLMDVGNEIQESISR
AYDVPEDVDEAELDAELEALGEETMMESSMADSAMPSFLQDEVAPPQFIDEPPEQTKVKEPASGLG*
Coding >Ani_SJS100_1|g5946.t1
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGATGGGGCCATAACCAATGTGGAAACA
CGCATTTCCAGCATTGACGTCAAGCTGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAG
ATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGGTTCTCCAGCGACGGAAACAGTACGAA
GCGCAGCGGGATCAGCTGTCGCAGCAGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAAT
GTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGAAGCAGTATGGTCAGATTGATATTGAT
AAGATTGAACGGCTGCAGGATGAGATGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGG
GCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAATTGGAGGCGCTAGGCGAGGAGACTATG
ATGGAGAGCTCGATGGCTGATAGTGCTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGAT
GAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTTAG
Transcript >Ani_SJS100_1|g5946.t1
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGATGGGGCCATAACCAATGTGGAAACA
CGCATTTCCAGCATTGACGTCAAGCTGGCGGCTCTCAACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAG
ATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAGAAAGCCCTCAAGGTTCTCCAGCGACGGAAACAGTACGAA
GCGCAGCGGGATCAGCTGTCGCAGCAGTCATGGAATATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAAT
GTGATGACGACGGTTGATGCTATGAAGACGACAACCAAGACCCTCAAGAAGCAGTATGGTCAGATTGATATTGAT
AAGATTGAACGGCTGCAGGATGAGATGGCGGATTTGATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGG
GCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAACTCGATGCGGAATTGGAGGCGCTAGGCGAGGAGACTATG
ATGGAGAGCTCGATGGCTGATAGTGCTATGCCTAGCTTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGAT
GAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCTAGTGGGTTGGGTTAG
Gene >Ani_SJS100_1|g5946.t1
ATGAATCGGCTATTCGGTACGAAGAACACGGCACCCAAGCCAACGCTAGATGGGGCCATAACCAATGTACATTTC
CCCTTTTCCCTTCCAACCTTCGTCATTCATCATTGTTGCCCAACTCTCCGAATTCATCTCGTCCCTTATCCGCCT
GACCCCGCATGATTAACATTTCCCCGACAGGTGGAAACACGCATTTCCAGCATTGACGTCAAGCTGGCGGCTCTC
AACTCGGAACTATCTACCTATCAAACCAAGATCTCCAAGATGCGCGACGGGCCGGGAAAAACCGCGTTACGGCAG
AAAGCCCTCAAGGTTCTCCAGCGACGGAAACAGTACGAAGCGCAGCGGGATCAGCTGTCGCAGCAGTCATGGAAT
ATGGAGCAGGCGGGCATGATGCAGGATAATCTGAAGAATGTGATGACGACGGTTGATGCTATGAAGACGACAACC
AAGACCCTCAAGAAGCAGTATGGTCAGATTGATATTGATAAGATTGAACGGCTGCAGGATGAGATGGCGGATTTG
ATGGACGTGGGGAATGAAATCCAGGAAAGTATATCGCGGGCGTATGACGTTCCCGAGGATGTCGATGAGGCGGAA
CTCGATGCGGAATTGGAGGCGCTAGGCGAGGAGACTATGATGGAGAGCTCGATGGCTGATAGTGCTATGCCTAGC
TTCCTGCAAGATGAGGTGGCGCCGCCGCAGTTCATTGATGAGCCCCCAGAGCAGACTAAGGTTAAGGAGCCTGCT
AGTGGGTTGGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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