Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5939.t1
Gene name
Locationscaffold_035:6159..6715
Strand+
Gene length (bp)556
Transcript length (bp)261
Coding sequence length (bp)261
Protein length (aa) 87

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15879 MWFE NADH-ubiquinone oxidoreductase MWFE subunit 1.8E-25 4 58

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5939.t1
MGVPFEALLPFGIIIGSFTVGGAGLWAIRRWDNEGKMPRWNKDKWDRVMMERDLRITGTKRGQSSNPEAPKGFEL
SNPWKIEKRIF*
Coding >Ani_SJS100_1|g5939.t1
ATGGGTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCATCATCATCGGATCGTTCACTGTCGGCGGTGCCGGCTTG
TGGGCTATCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGAACAAGGATAAGTGGGATAGAGTAATGATG
GAGAGAGACCTGAGAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGGAAGCTCCCAAGGGATTCGAGCTC
AGCAACCCCTGGAAGATCGAGAAACGGATTTTCTAG
Transcript >Ani_SJS100_1|g5939.t1
ATGGGTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCATCATCATCGGATCGTTCACTGTCGGCGGTGCCGGCTTG
TGGGCTATCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGAACAAGGATAAGTGGGATAGAGTAATGATG
GAGAGAGACCTGAGAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGGAAGCTCCCAAGGGATTCGAGCTC
AGCAACCCCTGGAAGATCGAGAAACGGATTTTCTAG
Gene >Ani_SJS100_1|g5939.t1
ATGGGTGTCCCTTTCGAGGCTCTCCTTCCCTTCGGCATCATCATCGGAGTACGTTCAGCGACCATTTCCTCTCCC
CATTTGTTTTCGACGTGGTAAGTACTGACCAATGCGTGACACAGTCGTTCACTGTCGGCGGTGCCGGCTTGTGGG
CTATCCGGAGATGGGACAACGAGGGCAAGATGCCGCGGTGGAACAAGGATAAGTGGGATAGAGTAAGTGAACCTG
CCACTTACCCGATGCGACCGGGATCAGACGTACTAACTCTTTTACAGCAAAGTATGTTATAACCTCGATTGATGT
CGTGCAACATCCAATTGGAGATCTCCTATTTCCGATCTTGAAAGAGAAACAGCGAGCTAACTCTCGACACCCCCC
ACCTACCAGTGATGGAGAGAGACCTGAGAATCACGGGCACGAAACGAGGACAATCGAGCAACCCGGAAGCTCCCA
AGGGATTCGAGCTCAGCAACCCCTGGAAGGTACGGACCAGCACAATCAGCAGCAGTGAGCGAAGCAAAATACTGA
ACCATGGCAGATCGAGAAACGGATTTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail