Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5935.t1
Gene name
Locationscaffold_034:306432..306948
Strand+
Gene length (bp)516
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 64 86 22
2 99 121 22
3 147 169 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5935.t1
MSTALSSASDFGTAVLRLSPLMISSASLMCAIDQQNAFRSFLTPKLANRPGHVSGNLVHDWFPAFARTTKWVILL
AYPLAGVVAVINSRAPGINPQTRYFYYAGGVLSVAHYYFGAWSMYWNSRICSKEKIGLRNEDGLRGWLGNNWRRM
WLVNIPAWLMFVCATATFVRV*
Coding >Ani_SJS100_1|g5935.t1
ATGTCTACCGCGCTCTCCAGTGCGTCCGACTTCGGCACGGCCGTCCTCCGCCTGAGCCCCCTGATGATTTCCTCG
GCCAGTCTGATGTGTGCCATTGACCAACAAAACGCCTTCCGGTCCTTTCTGACTCCTAAGCTTGCCAACCGACCA
GGCCACGTCTCCGGCAACCTGGTGCATGACTGGTTCCCCGCCTTCGCACGTACCACCAAGTGGGTGATTCTGCTG
GCCTATCCCCTGGCCGGCGTGGTGGCCGTCATCAATAGCCGCGCCCCCGGTATCAATCCGCAGACCCGTTACTTC
TACTACGCCGGGGGAGTGTTGAGTGTCGCCCACTACTACTTTGGGGCCTGGAGTATGTACTGGAACAGTCGCATA
TGTTCCAAGGAAAAGATCGGCCTCCGCAACGAAGATGGACTGCGCGGCTGGCTGGGCAATAACTGGCGGCGCATG
TGGTTGGTGAATATTCCAGCATGGCTGATGTTTGTATGTGCCACAGCGACGTTTGTGAGGGTTTAG
Transcript >Ani_SJS100_1|g5935.t1
ATGTCTACCGCGCTCTCCAGTGCGTCCGACTTCGGCACGGCCGTCCTCCGCCTGAGCCCCCTGATGATTTCCTCG
GCCAGTCTGATGTGTGCCATTGACCAACAAAACGCCTTCCGGTCCTTTCTGACTCCTAAGCTTGCCAACCGACCA
GGCCACGTCTCCGGCAACCTGGTGCATGACTGGTTCCCCGCCTTCGCACGTACCACCAAGTGGGTGATTCTGCTG
GCCTATCCCCTGGCCGGCGTGGTGGCCGTCATCAATAGCCGCGCCCCCGGTATCAATCCGCAGACCCGTTACTTC
TACTACGCCGGGGGAGTGTTGAGTGTCGCCCACTACTACTTTGGGGCCTGGAGTATGTACTGGAACAGTCGCATA
TGTTCCAAGGAAAAGATCGGCCTCCGCAACGAAGATGGACTGCGCGGCTGGCTGGGCAATAACTGGCGGCGCATG
TGGTTGGTGAATATTCCAGCATGGCTGATGTTTGTATGTGCCACAGCGACGTTTGTGAGGGTTTAG
Gene >Ani_SJS100_1|g5935.t1
ATGTCTACCGCGCTCTCCAGTGCGTCCGACTTCGGCACGGCCGTCCTCCGCCTGAGCCCCCTGATGATTTCCTCG
GCCAGTCTGATGTGTGCCATTGACCAACAAAACGCCTTCCGGTCCTTTCTGACTCCTAAGCTTGCCAACCGACCA
GGCCACGTCTCCGGCAACCTGGTGCATGACTGGTTCCCCGCCTTCGCACGTACCACCAAGTGGGTGATTCTGCTG
GCCTATCCCCTGGCCGGCGTGGTGGCCGTCATCAATAGCCGCGCCCCCGGTATCAATCCGCAGACCCGTTACTTC
TACTACGCCGGGGGAGTGTTGAGTGTCGCCCACTACTACTTTGGGGCCTGGAGTATGTACTGGAACAGTCGCATA
TGTTCCAAGGAAAAGATCGGCCTCCGCAACGAAGATGGACTGCGCGGCTGGCTGGGCAATAACTGGCGGCGCATG
TGGTTGGTGAATATTCCAGCATGGCTGATGTTTGTATGTGCCACAGCGACGTTTGTGAGGGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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