Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5932.t1
Gene name
Locationscaffold_034:291633..292180
Strand-
Gene length (bp)547
Transcript length (bp)483
Coding sequence length (bp)483
Protein length (aa) 161

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07110 EthD EthD domain 3.0E-10 16 112

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 22 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5932.t1
MTERVLRLSVYHCFNPDKPEAEVHEFVTNDHAVKAAKIHQKHGLLGYTLYFAPQSAQKVLSDWKRVGRRNWELDT
YDACVEFYFTDFAVMGAIAQDPDFGKLQEAELPFLDASRPPRAHLGWVQAYIHDGQIINVEGSKSVFPPFTELSQ
IVFPGVSDGK*
Coding >Ani_SJS100_1|g5932.t1
ATGACCGAACGCGTTCTCCGACTCAGCGTCTACCATTGCTTCAACCCTGACAAGCCTGAGGCAGAGGTGCACGAG
TTCGTGACCAACGACCACGCGGTGAAGGCAGCCAAAATTCATCAGAAACATGGACTACTCGGCTACACGTTGTAC
TTCGCGCCTCAAAGTGCCCAGAAGGTCCTGTCGGACTGGAAGAGGGTTGGCAGACGGAACTGGGAGCTGGACACC
TACGATGCCTGCGTAGAGTTCTACTTCACGGACTTTGCGGTTATGGGAGCTATTGCGCAAGACCCGGACTTTGGC
AAGTTGCAAGAGGCTGAACTGCCCTTCTTGGACGCCAGCCGTCCGCCCCGAGCCCACCTGGGATGGGTCCAGGCC
TACATCCACGATGGTCAGATCATCAATGTCGAGGGGAGCAAGTCCGTCTTTCCTCCCTTTACCGAACTGTCCCAG
ATCGTCTTCCCCGGGGTGTCTGATGGGAAATAA
Transcript >Ani_SJS100_1|g5932.t1
ATGACCGAACGCGTTCTCCGACTCAGCGTCTACCATTGCTTCAACCCTGACAAGCCTGAGGCAGAGGTGCACGAG
TTCGTGACCAACGACCACGCGGTGAAGGCAGCCAAAATTCATCAGAAACATGGACTACTCGGCTACACGTTGTAC
TTCGCGCCTCAAAGTGCCCAGAAGGTCCTGTCGGACTGGAAGAGGGTTGGCAGACGGAACTGGGAGCTGGACACC
TACGATGCCTGCGTAGAGTTCTACTTCACGGACTTTGCGGTTATGGGAGCTATTGCGCAAGACCCGGACTTTGGC
AAGTTGCAAGAGGCTGAACTGCCCTTCTTGGACGCCAGCCGTCCGCCCCGAGCCCACCTGGGATGGGTCCAGGCC
TACATCCACGATGGTCAGATCATCAATGTCGAGGGGAGCAAGTCCGTCTTTCCTCCCTTTACCGAACTGTCCCAG
ATCGTCTTCCCCGGGGTGTCTGATGGGAAATAA
Gene >Ani_SJS100_1|g5932.t1
ATGACCGAACGCGTTCTCCGACTCAGCGTCTACCATTGCTTCAACCCTGACAAGCCTGAGGCAGAGGTGCACGAG
TTCGTGACCAACGACCACGCGGTGAAGGCAGCCAAAATTCATCAGAAACATGGACTACTCGGCTACACGTTGGTA
TGGATCTCTTTTTTGTTGTCTCTAGTCGTTGCTCGGAAGCATCTAATATGCCCAATGGCAGTACTTCGCGCCTCA
AAGTGCCCAGAAGGTCCTGTCGGACTGGAAGAGGGTTGGCAGACGGAACTGGGAGCTGGACACCTACGATGCCTG
CGTAGAGTTCTACTTCACGGACTTTGCGGTTATGGGAGCTATTGCGCAAGACCCGGACTTTGGCAAGTTGCAAGA
GGCTGAACTGCCCTTCTTGGACGCCAGCCGTCCGCCCCGAGCCCACCTGGGATGGGTCCAGGCCTACATCCACGA
TGGTCAGATCATCAATGTCGAGGGGAGCAAGTCCGTCTTTCCTCCCTTTACCGAACTGTCCCAGATCGTCTTCCC
CGGGGTGTCTGATGGGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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