Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5926.t1
Gene name
Locationscaffold_034:279137..279718
Strand+
Gene length (bp)581
Transcript length (bp)516
Coding sequence length (bp)516
Protein length (aa) 172

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07110 EthD EthD domain 1.1E-05 34 114

GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0003824 catalytic activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5926.t1
MSTYGTRDRILRLRIAHYKTEDKTEAEAHKFGTLFAEKAAHLHEKHGIWGYAQVYTPEKTRKVVEAMNQKANRGW
VIDDHDFAVEFYFKTLEDLSKVSRDPEFHALQAEEVPYISKHHVVTSLGWVETFVEHGKVVHIENGKSTYGTFEE
MQEITMDPNYRKPADGTHNSQ*
Coding >Ani_SJS100_1|g5926.t1
ATGTCTACCTACGGCACCCGCGACCGTATTTTGCGTCTGCGCATCGCCCACTACAAGACCGAGGACAAGACGGAA
GCTGAAGCCCACAAGTTCGGCACTCTCTTTGCCGAAAAGGCTGCCCATTTGCACGAAAAGCATGGCATTTGGGGA
TACGCTCAAGTCTACACCCCCGAGAAGACCCGCAAGGTCGTCGAAGCCATGAATCAGAAGGCGAACCGGGGCTGG
GTAATAGACGATCATGACTTTGCCGTCGAATTCTACTTCAAGACGCTCGAGGACCTCTCCAAGGTCAGCCGGGAC
CCGGAATTCCACGCTCTGCAGGCGGAGGAGGTGCCCTACATTTCCAAGCACCATGTGGTCACCAGTCTCGGTTGG
GTCGAAACGTTTGTCGAGCACGGCAAGGTGGTGCACATTGAGAACGGCAAGTCGACCTACGGAACGTTCGAGGAG
ATGCAGGAGATTACCATGGATCCCAACTACCGCAAGCCCGCGGACGGCACCCACAACTCGCAGTAG
Transcript >Ani_SJS100_1|g5926.t1
ATGTCTACCTACGGCACCCGCGACCGTATTTTGCGTCTGCGCATCGCCCACTACAAGACCGAGGACAAGACGGAA
GCTGAAGCCCACAAGTTCGGCACTCTCTTTGCCGAAAAGGCTGCCCATTTGCACGAAAAGCATGGCATTTGGGGA
TACGCTCAAGTCTACACCCCCGAGAAGACCCGCAAGGTCGTCGAAGCCATGAATCAGAAGGCGAACCGGGGCTGG
GTAATAGACGATCATGACTTTGCCGTCGAATTCTACTTCAAGACGCTCGAGGACCTCTCCAAGGTCAGCCGGGAC
CCGGAATTCCACGCTCTGCAGGCGGAGGAGGTGCCCTACATTTCCAAGCACCATGTGGTCACCAGTCTCGGTTGG
GTCGAAACGTTTGTCGAGCACGGCAAGGTGGTGCACATTGAGAACGGCAAGTCGACCTACGGAACGTTCGAGGAG
ATGCAGGAGATTACCATGGATCCCAACTACCGCAAGCCCGCGGACGGCACCCACAACTCGCAGTAG
Gene >Ani_SJS100_1|g5926.t1
ATGTCTACCTACGGCACCCGCGACCGTATTTTGCGTCTGCGCATCGCCCACTACAAGACCGAGGACAAGACGGAA
GCTGAAGCCCACAAGTTCGGCACTCTCTTTGCCGAAAAGGCTGCCCATTTGCACGAAAAGCATGGCATTTGGGGA
TACGCTCAAGTAAAATTTCTTTCCCCCGCTCCCCTCGGGCCCCAAATTGTCCCGGACTGAACTCTTTTCTGTAGG
TCTACACCCCCGAGAAGACCCGCAAGGTCGTCGAAGCCATGAATCAGAAGGCGAACCGGGGCTGGGTAATAGACG
ATCATGACTTTGCCGTCGAATTCTACTTCAAGACGCTCGAGGACCTCTCCAAGGTCAGCCGGGACCCGGAATTCC
ACGCTCTGCAGGCGGAGGAGGTGCCCTACATTTCCAAGCACCATGTGGTCACCAGTCTCGGTTGGGTCGAAACGT
TTGTCGAGCACGGCAAGGTGGTGCACATTGAGAACGGCAAGTCGACCTACGGAACGTTCGAGGAGATGCAGGAGA
TTACCATGGATCCCAACTACCGCAAGCCCGCGGACGGCACCCACAACTCGCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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