Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g592.t1
Gene name
Locationscaffold_002:433623..434661
Strand-
Gene length (bp)1038
Transcript length (bp)1038
Coding sequence length (bp)1038
Protein length (aa) 346

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01205 UPF0029 Uncharacterized protein family UPF0029 2.0E-35 202 324
PF05773 RWD RWD domain 2.9E-08 13 128

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g592.t1
MDSALESLQNTDLAEEIEAINAIYEPDTLTITNTSASTGPSTLDLGGSGSSDSSPPSTTIKLQLPEHPHLSFLLG
FNSTYPDTPPKILGTASTASRGEGKLAVDVLEDILSRTYQPGAVCLFDLINEAVQAFTELNIGGSATTTTTTNNN
DTTSHTQPASEELNTENGSHQPLTTRSTTPDHHTFNLTSPPPWILSDVITEKKSVFVGRAAHVTSLDQAKAFLDH
LLATEKKVASATHNISAWRIREVKSSTSTAGGSKNGEATEMIVQDCDDDGETAAGGRLLHLMQLMDVWDVVVVVT
RWYGGVLLGPDRFRIINAAGRDALVKGGFVKEKMSGEKGKKKGKK*
Coding >Ani_SJS100_1|g592.t1
ATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAATTGAAGCCATCAATGCCATCTACGAA
CCGGACACCCTTACCATCACTAACACCTCTGCCTCGACCGGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCT
TCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTCCAACTCCCAGAACACCCTCACTTGTCCTTCCTCCTCGGA
TTCAACTCAACATATCCCGACACCCCGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAG
CTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGGCGCGGTATGTCTATTCGACCTGATC
AATGAAGCCGTCCAGGCATTCACGGAGCTCAATATCGGCGGCAGCGCTACAACAACCACCACCACCAACAACAAT
GACACAACTTCCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAAAACGGCAGCCATCAACCGCTAACCACA
AGATCAACAACCCCCGACCATCACACATTTAACCTCACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCACG
GAAAAGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACCAGGCAAAGGCGTTCCTGGATCAT
CTGCTCGCGACGGAGAAAAAGGTTGCGTCCGCGACGCATAATATCAGTGCATGGAGGATTCGCGAGGTGAAATCA
TCTACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTGTGCAGGATTGTGATGATGATGGG
GAGACGGCTGCTGGAGGTCGACTACTGCATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACA
AGATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATGCGGCCGGGAGGGATGCGCTGGTC
AAGGGGGGTTTTGTTAAAGAGAAGATGTCTGGAGAGAAGGGGAAGAAGAAGGGAAAGAAATGA
Transcript >Ani_SJS100_1|g592.t1
ATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAATTGAAGCCATCAATGCCATCTACGAA
CCGGACACCCTTACCATCACTAACACCTCTGCCTCGACCGGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCT
TCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTCCAACTCCCAGAACACCCTCACTTGTCCTTCCTCCTCGGA
TTCAACTCAACATATCCCGACACCCCGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAG
CTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGGCGCGGTATGTCTATTCGACCTGATC
AATGAAGCCGTCCAGGCATTCACGGAGCTCAATATCGGCGGCAGCGCTACAACAACCACCACCACCAACAACAAT
GACACAACTTCCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAAAACGGCAGCCATCAACCGCTAACCACA
AGATCAACAACCCCCGACCATCACACATTTAACCTCACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCACG
GAAAAGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACCAGGCAAAGGCGTTCCTGGATCAT
CTGCTCGCGACGGAGAAAAAGGTTGCGTCCGCGACGCATAATATCAGTGCATGGAGGATTCGCGAGGTGAAATCA
TCTACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTGTGCAGGATTGTGATGATGATGGG
GAGACGGCTGCTGGAGGTCGACTACTGCATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACA
AGATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATGCGGCCGGGAGGGATGCGCTGGTC
AAGGGGGGTTTTGTTAAAGAGAAGATGTCTGGAGAGAAGGGGAAGAAGAAGGGAAAGAAATGA
Gene >Ani_SJS100_1|g592.t1
ATGGATTCGGCCCTCGAATCCCTGCAGAATACCGATCTAGCGGAAGAAATTGAAGCCATCAATGCCATCTACGAA
CCGGACACCCTTACCATCACTAACACCTCTGCCTCGACCGGCCCCTCAACTCTCGACCTCGGCGGCTCCGGCTCT
TCAGACTCTTCTCCTCCTTCAACAACAATAAAGCTCCAACTCCCAGAACACCCTCACTTGTCCTTCCTCCTCGGA
TTCAACTCAACATATCCCGACACCCCGCCCAAAATCCTAGGAACAGCATCCACAGCCTCACGAGGAGAGGGCAAG
CTCGCCGTCGATGTACTAGAGGACATTCTCAGCCGCACATACCAGCCGGGCGCGGTATGTCTATTCGACCTGATC
AATGAAGCCGTCCAGGCATTCACGGAGCTCAATATCGGCGGCAGCGCTACAACAACCACCACCACCAACAACAAT
GACACAACTTCCCACACCCAACCTGCCTCCGAAGAACTCAACACCGAAAACGGCAGCCATCAACCGCTAACCACA
AGATCAACAACCCCCGACCATCACACATTTAACCTCACTAGCCCACCGCCATGGATCCTTTCCGACGTCATCACG
GAAAAGAAATCCGTCTTCGTCGGGCGCGCAGCCCACGTCACGAGTCTGGACCAGGCAAAGGCGTTCCTGGATCAT
CTGCTCGCGACGGAGAAAAAGGTTGCGTCCGCGACGCATAATATCAGTGCATGGAGGATTCGCGAGGTGAAATCA
TCTACTTCTACTGCTGGCGGTAGTAAGAATGGAGAAGCTACAGAGATGATTGTGCAGGATTGTGATGATGATGGG
GAGACGGCTGCTGGAGGTCGACTACTGCATTTGATGCAGTTGATGGATGTTTGGGATGTGGTGGTTGTGGTGACA
AGATGGTATGGCGGTGTGTTGCTGGGGCCGGATCGGTTTCGCATTATCAATGCGGCCGGGAGGGATGCGCTGGTC
AAGGGGGGTTTTGTTAAAGAGAAGATGTCTGGAGAGAAGGGGAAGAAGAAGGGAAAGAAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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