© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5916.t1 |
| Gene name | |
| Location | scaffold_034:248889..250486 |
| Strand | + |
| Gene length (bp) | 1597 |
| Transcript length (bp) | 1455 |
| Coding sequence length (bp) | 1455 |
| Protein length (aa) | 485 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.5E-104 | 11 | 455 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.0E-24 | 13 | 345 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| 2 | 47 | 69 | 22 |
| 3 | 78 | 97 | 19 |
| 4 | 102 | 124 | 22 |
| 5 | 137 | 156 | 19 |
| 6 | 166 | 188 | 22 |
| 7 | 258 | 280 | 22 |
| 8 | 295 | 317 | 22 |
| 9 | 324 | 346 | 22 |
| 10 | 356 | 378 | 22 |
| 11 | 418 | 440 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5916.t1 MAKLSTLLSAVFLAIAGFLFGYDSGIITSTIGQTEFIRYFNNPNDTVTGGVVSAFQGGAILGTIINIFTGDRLGR KMSVFVGACISIVGCALQGGAINMTMLIIGRFIAGVAVGMLTATVPMYAGEMAEAASRGMMSGLLQWMLSWGSLV AQWLGYGCSFNSTDFQWRFPLAFQCVPGLVLMTGVWFLQESPRWLMEQDRHEEALATLHHLHGDGTPEKSQYIEL EYQEIRDTIEAERAHNTITWTSILTKPSWRRRLILGCGVQAFGPLSGINVINYYGTRIYSSLGIDTRTTLMIIGI SGGLSIIYCTIGLWALERVGRIRPLIVSAAGMAAALVCNAAMSQHYNESNTNQLRAMVAMNFVFSLFYTSPGIIS WVYPAEIFPVDIRNQGNSITTFTNWTVNLVFAQFSPTALSNIGFRYFYVFFVFNLIAMICYIFFFPETKGKTLEQ MDELFGDVMTPPGDLKGTDEPQVTMIEDAMNVSS* |
| Coding | >Ani_SJS100_1|g5916.t1 ATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCATTGCAGGCTTTCTTTTCGGATATGACAGTGGT ATCATTACCTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACGGTGACGGGGGGT GTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAACCATCATCAACATCTTCACTGGTGATCGACTGGGACGG AAAATGTCCGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCGATCAACATGACC ATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGT GAGATGGCCGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGGGGGTCTTTAGTT GCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTACCGATTTCCAATGGCGCTTTCCACTTGCGTTTCAATGC GTCCCTGGTCTTGTTCTCATGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCGC CACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTCCGGAAAAGTCGCAGTACATCGAGCTG GAGTATCAAGAGATCCGGGACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCACC AAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCTTTGGCCCATTGTCAGGAATCAATGTC ATAAACTACTATGGGACGCGCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTATC TCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGGAGCGGGTGGGTCGGATCCGACCGCTA ATCGTCTCAGCGGCGGGCATGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAAC ACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGTTCTATACATCGCCTGGTATCATCTCC TGGGTCTACCCTGCGGAGATCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTGG ACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACATTGGCTTCCGTTACTTTTACGTCTTC TTCGTCTTCAACCTCATTGCTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACAG ATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGGGGACGGATGAGCCCCAAGTAACAATG ATTGAAGACGCTATGAATGTTTCATCCTAA |
| Transcript | >Ani_SJS100_1|g5916.t1 ATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCATTGCAGGCTTTCTTTTCGGATATGACAGTGGT ATCATTACCTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACGGTGACGGGGGGT GTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAACCATCATCAACATCTTCACTGGTGATCGACTGGGACGG AAAATGTCCGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCGATCAACATGACC ATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGT GAGATGGCCGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGGGGGTCTTTAGTT GCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTACCGATTTCCAATGGCGCTTTCCACTTGCGTTTCAATGC GTCCCTGGTCTTGTTCTCATGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCGC CACGAGGAGGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTCCGGAAAAGTCGCAGTACATCGAGCTG GAGTATCAAGAGATCCGGGACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCACC AAACCTTCCTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCTTTGGCCCATTGTCAGGAATCAATGTC ATAAACTACTATGGGACGCGCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTATC TCAGGCGGCCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGGAGCGGGTGGGTCGGATCCGACCGCTA ATCGTCTCAGCGGCGGGCATGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAAC ACTAATCAGCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGTTCTATACATCGCCTGGTATCATCTCC TGGGTCTACCCTGCGGAGATCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTGG ACTGTCAATCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACATTGGCTTCCGTTACTTTTACGTCTTC TTCGTCTTCAACCTCATTGCTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACAG ATGGACGAGCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGGGGACGGATGAGCCCCAAGTAACAATG ATTGAAGACGCTATGAATGTTTCATCCTAA |
| Gene | >Ani_SJS100_1|g5916.t1 ATGGCCAAACTATCAACATTACTCTCCGCTGTCTTCTTGGCCATTGCAGGTAGACATTTTTTCTCCTACTTCCTC TTGAACATAAAGGTGGAAACTCATTGATAACTCCGGTGACGACGAATAGGCTTTCTTTTCGGATATGACAGTGGT ATCATTACCTCGACGATCGGCCAAACCGAGTTCATTCGATATTTTAACAACCCGAACGATACGGTGACGGGGGGT GTGGTATCCGCCTTCCAAGGAGGTGCCATTCTCGGAACCATCATCAACATCTTCACTGGTGATCGACTGGGACGG AAAATGTCCGTCTTTGTCGGTGCCTGCATTTCCATTGTGGGCTGCGCGCTGCAAGGCGGAGCGATCAACATGACC ATGCTCATCATCGGTCGGTTCATTGCGGGTGTAGCTGTGGGCATGCTGACCGCCACCGTGCCCATGTACGCCGGT GAGATGGCCGAAGCCGCATCCCGCGGAATGATGTCGGGTCTACTGCAGTGGATGTTGAGTTGGGGGTCTTTAGTT GCGCAGTGGTTGGGATATGGATGTTCCTTCAATAGTACCGATTTCCAATGTGCATCTCCCCCTATTATGGCTTGT TTATGCTGCATGTGTACGAAGTGTCTAACCTATATCCACAGGGCGCTTTCCACTTGCGTTTCAATGCGTCCCTGG TCTTGTTCTCATGACCGGTGTCTGGTTTCTCCAGGAATCCCCCCGTTGGTTGATGGAACAAGACCGCCACGAGGA GGCGTTGGCTACACTACACCACCTGCATGGCGACGGCACTCCGGAAAAGTCGCAGTACATCGAGCTGGAGTATCA AGAGATCCGGGACACCATCGAGGCGGAGCGCGCACACAACACCATTACTTGGACCTCCATCCTCACCAAACCTTC CTGGCGCCGTCGCCTCATCCTCGGCTGCGGTGTGCAGGCCTTTGGCCCATTGTCAGGAATCAATGTCATAAACTA CTATGGGACGCGCATCTACAGCTCATTGGGCATCGACACGCGCACCACCCTGATGATCATCGGTATCTCAGGCGG CCTGTCGATTATCTATTGCACCATCGGGCTCTGGGCTCTGGAGCGGGTGGGTCGGATCCGACCGCTAATCGTCTC AGCGGCGGGCATGGCAGCAGCACTGGTTTGCAATGCAGCCATGTCCCAGCATTACAATGAAAGTAACACTAATCA GCTACGGGCAATGGTCGCAATGAACTTCGTCTTCAGCCTGTTCTATACATCGCCTGGTATCATCTCCTGGGTCTA CCCTGCGGAGATCTTCCCCGTGGATATTCGTAACCAAGGCAATTCCATCACCACTTTTACTAATTGGACTGTCAA TCTGGTCTTCGCACAGTTCTCGCCTACAGCCCTGTCCAACATTGGCTTCCGTTACTTTTACGTCTTCTTCGTCTT CAACCTCATTGCTATGATCTGCTATATCTTCTTCTTCCCGGAGACCAAGGGCAAGACCCTCGAACAGATGGACGA GCTGTTCGGGGACGTGATGACTCCTCCTGGAGACCTAAAGGGGACGGATGAGCCCCAAGTAACAATGATTGAAGA CGCTATGAATGTTTCATCCTAA |