© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5910.t1 |
| Gene name | |
| Location | scaffold_034:232933..234671 |
| Strand | + |
| Gene length (bp) | 1738 |
| Transcript length (bp) | 1542 |
| Coding sequence length (bp) | 1542 |
| Protein length (aa) | 514 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13520 | AA_permease_2 | Amino acid permease | 2.2E-51 | 41 | 474 |
| PF00324 | AA_permease | Amino acid permease | 6.0E-15 | 48 | 479 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 44 | 66 | 22 |
| 2 | 79 | 101 | 22 |
| 3 | 121 | 143 | 22 |
| 4 | 164 | 181 | 17 |
| 5 | 196 | 215 | 19 |
| 6 | 300 | 322 | 22 |
| 7 | 337 | 359 | 22 |
| 8 | 400 | 417 | 17 |
| 9 | 422 | 444 | 22 |
| 10 | 457 | 479 | 22 |
| 11 | 483 | 500 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5910.t1 MSAQDEDSNAPLLGGDPALEYGGIAGTSSSKAHNSSFRQNLGTAEAFSIIISIVIGSGIFTSPGAIDTNVPSPGA ALVVWFVGGLLAWTGAATMAELGTAIPGEGGVQPYLQYIYGEVFGFLAAWTWVIAVVPASLAILSIVFVESIYSA TGVTDQPNTMTHKILSALLLLLISMANSVSTQFSTRLNRFFVTTKFAAILVTVVAGLGVVVYHLASWDRVSPSAP QDWLARDWFAARNAIGLDGREIEWQNLHGWETLGHYSAALYGALWAYSGWDKAIYISVELSAPARQLPLAINKAI PIVILSFIAVNVAYYILLPWNVVSTTDSVAVTSFNHLLGPAFGATVAGLICLVVAGSLLGSSFVAGRMVVAAANS NWLPSFLGRVGSVSRQSASTADAPINAILFSTGCSIVYIFFGNFRALVTFNGLAEYTFFFLTMVGAIVLRVREPQ LPRPYKPMICIPLIFALVSGCVVTRGAVFAPVQAMVLIGLWLMGLGFYSARRRWVGKREAERG* |
| Coding | >Ani_SJS100_1|g5910.t1 ATGTCGGCCCAAGATGAAGATAGTAATGCGCCTCTTCTTGGAGGAGATCCTGCGTTGGAGTATGGAGGTATCGCG GGAACCTCGTCTAGCAAAGCCCATAATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGCGTTCAGCATCATC ATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCCCTGGCGCCATAGACACCAATGTTCCCTCCCCTGGGGCA GCCCTGGTCGTCTGGTTCGTCGGGGGTCTCTTGGCATGGACAGGGGCTGCAACTATGGCTGAGCTCGGGACGGCG ATTCCGGGAGAAGGAGGTGTTCAACCGTACCTTCAGTACATCTATGGTGAGGTGTTTGGCTTCCTTGCCGCCTGG ACATGGGTCATCGCGGTGGTGCCGGCATCGCTAGCAATCTTGAGCATCGTGTTCGTGGAAAGCATCTACTCGGCG ACTGGGGTGACCGATCAACCCAATACCATGACACATAAAATTCTATCCGCTCTTTTATTGCTCCTCATCAGCATG GCAAACTCGGTCAGCACCCAGTTCAGTACGCGGCTGAATAGATTCTTTGTCACCACCAAGTTTGCCGCCATCTTG GTTACTGTAGTTGCTGGACTGGGCGTCGTCGTCTATCACCTTGCTAGTTGGGATAGAGTGAGTCCATCGGCACCC CAGGACTGGCTAGCCAGAGACTGGTTTGCTGCGCGCAACGCAATTGGTTTAGATGGCAGGGAGATAGAATGGCAG AATTTACACGGGTGGGAGACTCTTGGTCATTACTCCGCCGCGCTCTATGGCGCACTATGGGCGTATTCAGGATGG GACAAGGCAATCTATATCAGCGTCGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAACAAGGCCATT CCCATTGTCATCCTAAGTTTTATCGCAGTGAATGTTGCGTACTACATTCTTTTACCCTGGAATGTAGTGTCAACA ACTGATAGTGTGGCAGTTACATCGTTCAACCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATC TGTCTAGTGGTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGCATGGTGGTGGCCGCAGCCAATTCG AACTGGTTGCCCTCATTTCTGGGCCGCGTGGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATC AATGCGATTCTCTTCTCCACGGGCTGTTCCATCGTATACATCTTCTTCGGGAACTTTCGTGCCCTGGTGACTTTC AATGGTCTGGCGGAGTATACGTTTTTCTTCTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAG CTCCCCCGCCCGTATAAGCCGATGATCTGTATACCCCTTATATTCGCTCTAGTCAGTGGGTGTGTGGTCACTCGT GGCGCTGTTTTTGCTCCCGTGCAGGCGATGGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCG AGGAGGCGATGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGA |
| Transcript | >Ani_SJS100_1|g5910.t1 ATGTCGGCCCAAGATGAAGATAGTAATGCGCCTCTTCTTGGAGGAGATCCTGCGTTGGAGTATGGAGGTATCGCG GGAACCTCGTCTAGCAAAGCCCATAATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGCGTTCAGCATCATC ATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCCCTGGCGCCATAGACACCAATGTTCCCTCCCCTGGGGCA GCCCTGGTCGTCTGGTTCGTCGGGGGTCTCTTGGCATGGACAGGGGCTGCAACTATGGCTGAGCTCGGGACGGCG ATTCCGGGAGAAGGAGGTGTTCAACCGTACCTTCAGTACATCTATGGTGAGGTGTTTGGCTTCCTTGCCGCCTGG ACATGGGTCATCGCGGTGGTGCCGGCATCGCTAGCAATCTTGAGCATCGTGTTCGTGGAAAGCATCTACTCGGCG ACTGGGGTGACCGATCAACCCAATACCATGACACATAAAATTCTATCCGCTCTTTTATTGCTCCTCATCAGCATG GCAAACTCGGTCAGCACCCAGTTCAGTACGCGGCTGAATAGATTCTTTGTCACCACCAAGTTTGCCGCCATCTTG GTTACTGTAGTTGCTGGACTGGGCGTCGTCGTCTATCACCTTGCTAGTTGGGATAGAGTGAGTCCATCGGCACCC CAGGACTGGCTAGCCAGAGACTGGTTTGCTGCGCGCAACGCAATTGGTTTAGATGGCAGGGAGATAGAATGGCAG AATTTACACGGGTGGGAGACTCTTGGTCATTACTCCGCCGCGCTCTATGGCGCACTATGGGCGTATTCAGGATGG GACAAGGCAATCTATATCAGCGTCGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAACAAGGCCATT CCCATTGTCATCCTAAGTTTTATCGCAGTGAATGTTGCGTACTACATTCTTTTACCCTGGAATGTAGTGTCAACA ACTGATAGTGTGGCAGTTACATCGTTCAACCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATC TGTCTAGTGGTAGCAGGATCCTTGCTGGGAAGTTCGTTCGTTGCCGGTCGCATGGTGGTGGCCGCAGCCAATTCG AACTGGTTGCCCTCATTTCTGGGCCGCGTGGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATC AATGCGATTCTCTTCTCCACGGGCTGTTCCATCGTATACATCTTCTTCGGGAACTTTCGTGCCCTGGTGACTTTC AATGGTCTGGCGGAGTATACGTTTTTCTTCTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAG CTCCCCCGCCCGTATAAGCCGATGATCTGTATACCCCTTATATTCGCTCTAGTCAGTGGGTGTGTGGTCACTCGT GGCGCTGTTTTTGCTCCCGTGCAGGCGATGGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCG AGGAGGCGATGGGTAGGCAAGAGAGAGGCGGAGAGAGGCTGA |
| Gene | >Ani_SJS100_1|g5910.t1 ATGTCGGCCCAAGATGAAGATAGTAATGCGCCTCTTCTTGGAGGAGATCCTGCGTTGGAGTATGGAGGTATCGCG GGAACCTCGTCTAGCAAAGCCCATAATTCCTCGTTTCGGCAGAACTTGGGGACGGCCGAGGCGTTCAGCATCATC ATTAGCATCGTAATCGGAAGCGGAATTTTCACCTCCCCTGGCGCCATAGACACCAATGTTCCCTCCCCTGGGGCA GCCCTGGTCGTCTGGTTCGTCGGGGGTCTCTTGGCATGGACAGGGGCTGCAACTATGGCTGAGCTCGGGACGGCG ATTCCGGGAGAAGGTCCGTACAGATCGCGTTTTCAAGACTCCCTAATGGCTCACTCTTTTCACCGCAGGAGGTGT TCAACCGTACCTTCAGTACATCTATGGTGAGGTGTTTGGCTTCCTTGCCGCCTGGACATGGGTCATCGCGGTGGT GCCGGCATCGCTAGCAATCTTGAGCATCGTGTTCGTGGAAAGCATCTACTCGGCGACTGGGGTGACCGATCAACC CAATACCATGACACATAAAATTCTATCCGCTCTTTTATTGCTCCTCATCAGCATGGCAAACTCGGTCAGCACCCA GTTCAGTACGCGGCTGAATAGATTCTTTGTCACCACCAAGTTTGCCGCCATCTTGGTTACTGTAGTTGCTGGACT GGGCGTCGTCGTCTATCACCTTGCTAGTTGGGATAGAGTGAGTCCATCGGCACCCCAGGACTGGCTAGCCAGAGA CTGGTTTGCTGCGCGCAACGCAATTGGTTTAGATGGCAGGGAGATAGAATGGCAGAATTTACACGGGTGGGAGAC TCTTGGTCATTACTCCGCCGCGCTCTATGGCGCACTATGGGCGTATTCAGGATGGGACAAGGTATGATACAGCCC TTTCACTACCAAATTAGTTGTTGGAGTATCCTCACCTTGACGGACGCTCCATTCCCAGGCAATCTATATCAGCGT CGAACTCTCTGCTCCGGCTCGTCAGCTGCCTCTAGCCATCAACAAGGCCATTCCCATTGTCATCCTAAGTTTTAT CGCAGTGAATGTTGCGTACTACATTCTTTTACCCTGGAATGTAGTGTCAACAACTGATAGTGTGGCAGTTGTATG GTTCTCTCCTGGGTGTCACTGATAGGAAAAGTGAGCCAGTTTCACCGGCTGACATTCATCGCAGACATCGTTCAA CCACCTCCTTGGACCTGCATTTGGTGCCACCGTGGCGGGTCTCATCTGTCTAGTGGTAGCAGGATCCTTGCTGGG AAGTTCGTTCGTTGCCGGTCGCATGGTGGTGGCCGCAGCCAATTCGAACTGGTTGCCCTCATTTCTGGGCCGCGT GGGCTCGGTCTCAAGGCAGTCAGCCTCGACAGCAGATGCGCCCATCAATGCGATTCTCTTCTCCACGGGCTGTTC CATCGTATACATCTTCTTCGGGAACTTTCGTGCCCTGGTGACTTTCAATGGTCTGGCGGAGTATACGTTTTTCTT CTTGACCATGGTTGGCGCCATCGTCCTGCGGGTTCGTGAACCACAGCTCCCCCGCCCGTATAAGCCGATGATCTG TATACCCCTTATATTCGCTCTAGTCAGTGGGTGTGTGGTCACTCGTGGCGCTGTTTTTGCTCCCGTGCAGGCGAT GGTGCTCATTGGATTGTGGCTGATGGGCCTGGGGTTCTACAGCGCGAGGAGGCGATGGGTAGGCAAGAGAGAGGC GGAGAGAGGCTGA |