Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5899.t1
Gene name
Location	scaffold_034:202387..203209
Strand	-
Gene length (bp)	822
Transcript length (bp)	759
Coding sequence length (bp)	759
Protein length (aa)	253

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	3.8E-16	11	230

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 36	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	7	29	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5899.t1 MQQQPTVAFFGATGGCANACLALALQAGYHCSALARTPSKLHNLLQQLDVPESAIAKYLTVTEGDIYDHEAVQKT LYLDGRPVDLIVSGLGGKPRFEYGIKATLDNPTICQDGVRTILSAARSCPQKPRIVIISTTGLSDTRDVPLLMLP LYHWLLKVPHEDKKVMEKLVEAEMQKPEEERAIDGYLMVRPSLLVNGDGDGLSKIKTGTDEKPAVGYYISRRDVG LWIFERIIHQASLTECQYWGQKVSLTV*
Coding	>Ani_SJS100_1\|g5899.t1 ATGCAACAACAGCCAACAGTAGCCTTTTTTGGGGCAACGGGGGGATGTGCCAACGCGTGCCTGGCACTGGCCCTG CAAGCCGGGTATCACTGCTCCGCCCTGGCTCGCACGCCCTCCAAGCTCCACAACCTGCTCCAGCAGCTCGATGTC CCCGAATCCGCCATTGCGAAATACCTAACGGTCACGGAAGGTGACATCTACGATCACGAGGCCGTTCAGAAGACC CTCTATCTCGATGGCCGCCCCGTCGACCTGATCGTCTCGGGCCTCGGCGGTAAGCCACGCTTCGAGTATGGCATC AAAGCCACCCTAGACAACCCGACCATCTGCCAAGATGGCGTCCGGACCATCCTGTCCGCCGCTCGATCGTGTCCG CAGAAGCCCCGGATCGTGATCATCAGCACCACCGGCCTCAGCGACACGCGCGACGTGCCACTTCTGATGCTGCCC CTGTACCATTGGTTGCTCAAGGTGCCACACGAGGACAAGAAGGTGATGGAGAAGCTGGTCGAGGCCGAGATGCAG AAGCCAGAGGAGGAACGCGCCATCGACGGGTATCTGATGGTGCGGCCCTCCTTGTTGGTCAATGGCGATGGCGAT GGGTTGTCGAAGATTAAGACCGGCACCGACGAGAAACCCGCGGTGGGCTATTACATTAGTCGTCGGGACGTGGGT CTTTGGATATTCGAGAGGATAATTCACCAGGCATCGCTTACGGAGTGTCAGTATTGGGGGCAGAAGGTGTCCTTG ACGGTCTAG
Transcript	>Ani_SJS100_1\|g5899.t1 ATGCAACAACAGCCAACAGTAGCCTTTTTTGGGGCAACGGGGGGATGTGCCAACGCGTGCCTGGCACTGGCCCTG CAAGCCGGGTATCACTGCTCCGCCCTGGCTCGCACGCCCTCCAAGCTCCACAACCTGCTCCAGCAGCTCGATGTC CCCGAATCCGCCATTGCGAAATACCTAACGGTCACGGAAGGTGACATCTACGATCACGAGGCCGTTCAGAAGACC CTCTATCTCGATGGCCGCCCCGTCGACCTGATCGTCTCGGGCCTCGGCGGTAAGCCACGCTTCGAGTATGGCATC AAAGCCACCCTAGACAACCCGACCATCTGCCAAGATGGCGTCCGGACCATCCTGTCCGCCGCTCGATCGTGTCCG CAGAAGCCCCGGATCGTGATCATCAGCACCACCGGCCTCAGCGACACGCGCGACGTGCCACTTCTGATGCTGCCC CTGTACCATTGGTTGCTCAAGGTGCCACACGAGGACAAGAAGGTGATGGAGAAGCTGGTCGAGGCCGAGATGCAG AAGCCAGAGGAGGAACGCGCCATCGACGGGTATCTGATGGTGCGGCCCTCCTTGTTGGTCAATGGCGATGGCGAT GGGTTGTCGAAGATTAAGACCGGCACCGACGAGAAACCCGCGGTGGGCTATTACATTAGTCGTCGGGACGTGGGT CTTTGGATATTCGAGAGGATAATTCACCAGGCATCGCTTACGGAGTGTCAGTATTGGGGGCAGAAGGTGTCCTTG ACGGTCTAG
Gene	>Ani_SJS100_1\|g5899.t1 ATGCAACAACAGCCAACAGTAGCCTTTTTTGGGGCAACGGGGGGATGTGCCAACGCGTGCCTGGCACTGGCCCTG CAAGCCGGGTATCACTGCTCCGCCCGTACGTTTTTCCGTTCCTTTCCAAGCCAGACCCAAAACTGACTGACTCTG GATCAATTAACAGTGGCTCGCACGCCCTCCAAGCTCCACAACCTGCTCCAGCAGCTCGATGTCCCCGAATCCGCC ATTGCGAAATACCTAACGGTCACGGAAGGTGACATCTACGATCACGAGGCCGTTCAGAAGACCCTCTATCTCGAT GGCCGCCCCGTCGACCTGATCGTCTCGGGCCTCGGCGGTAAGCCACGCTTCGAGTATGGCATCAAAGCCACCCTA GACAACCCGACCATCTGCCAAGATGGCGTCCGGACCATCCTGTCCGCCGCTCGATCGTGTCCGCAGAAGCCCCGG ATCGTGATCATCAGCACCACCGGCCTCAGCGACACGCGCGACGTGCCACTTCTGATGCTGCCCCTGTACCATTGG TTGCTCAAGGTGCCACACGAGGACAAGAAGGTGATGGAGAAGCTGGTCGAGGCCGAGATGCAGAAGCCAGAGGAG GAACGCGCCATCGACGGGTATCTGATGGTGCGGCCCTCCTTGTTGGTCAATGGCGATGGCGATGGGTTGTCGAAG ATTAAGACCGGCACCGACGAGAAACCCGCGGTGGGCTATTACATTAGTCGTCGGGACGTGGGTCTTTGGATATTC GAGAGGATAATTCACCAGGCATCGCTTACGGAGTGTCAGTATTGGGGGCAGAAGGTGTCCTTGACGGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail