Protein ID | Ani_SJS100_1|g5893.t1 |
Gene name | |
Location | scaffold_034:189068..190488 |
Strand | - |
Gene length (bp) | 1420 |
Transcript length (bp) | 1098 |
Coding sequence length (bp) | 1098 |
Protein length (aa) | 366 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 17 | 39 | 22 |
2 | 52 | 74 | 22 |
3 | 100 | 122 | 22 |
4 | 129 | 151 | 22 |
5 | 177 | 199 | 22 |
6 | 211 | 233 | 22 |
7 | 248 | 270 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5893.t1 MLLWIRAVDDNASQASVIVIPTIVTTVIAVVLTLLRLYVRKFVMRTLSWDDWFNLLATLTTLVAMALILAAVPYG LGRHYDTLDVDRAVYCVKLLRMCLFPLLFSTIFLKISISLLLMRLFLTTKMWKIFFWCFIAFNTVTSLLDAAIVL PQCDPVARTWDKRVDGTCWPKSAINEAAIAQGAIAAGTDIVLSILPIVFLWKVKIPIKVKAAICGLMALGFASAG FALARTQYVSTLTESSDPTWDYINLYMCAFLESSIGVIAAAAPSVRPLLRPGFWNKEYSRSRSRSFPLHTLTAKK SARPVWEDTLFDTRFDVEDRPINSRDSDSKLWPQLSMAIVKRTSIEVVTNSMTHSEVKAMGRQSA* |
Coding | >Ani_SJS100_1|g5893.t1 ATGCTGCTCTGGATACGGGCGGTTGACGACAATGCCTCCCAGGCATCAGTCATCGTTATCCCGACTATTGTGACC ACGGTCATTGCCGTCGTCCTGACTCTGCTGCGGTTGTACGTGCGAAAGTTCGTCATGAGGACACTGTCCTGGGAT GACTGGTTCAACCTCCTCGCAACGTTGACCACTCTGGTCGCCATGGCCTTGATACTCGCTGCAGTTCCGTATGGT CTAGGGCGTCATTACGACACCCTCGATGTCGACCGTGCTGTGTACTGCGTCAAGCTCTTGCGGATGTGCCTCTTT CCGCTACTGTTCTCGACCATCTTCCTGAAGATCTCCATCAGTCTTCTCTTGATGAGGCTGTTTCTTACAACCAAG ATGTGGAAGATATTCTTTTGGTGCTTCATTGCCTTCAATACGGTCACGAGCCTCCTGGATGCCGCCATCGTCCTC CCTCAGTGTGATCCGGTGGCCCGCACATGGGACAAAAGAGTGGATGGGACCTGCTGGCCAAAGTCAGCAATTAAT GAGGCAGCCATTGCGCAAGGGGCAATTGCCGCTGGAACAGACATTGTGCTATCCATCCTACCAATCGTGTTTCTA TGGAAGGTTAAGATTCCGATCAAAGTGAAGGCAGCCATTTGTGGACTCATGGCCCTGGGATTTGCGAGCGCGGGT TTTGCACTTGCGCGAACACAGTACGTTTCCACTTTGACCGAGTCATCGGATCCTACGTGGGACTACATAAATCTC TACATGTGTGCTTTCCTGGAATCATCCATTGGAGTCATCGCTGCTGCTGCACCCTCCGTTAGACCCCTCCTTCGT CCTGGATTCTGGAACAAGGAATATTCCCGATCGAGATCCCGCTCGTTTCCATTGCACACATTGACCGCCAAGAAG AGCGCACGACCGGTGTGGGAAGATACTCTTTTCGATACCAGGTTCGATGTGGAAGACCGCCCGATCAATTCGAGA GACAGCGATTCCAAGCTGTGGCCACAGTTGAGCATGGCTATCGTGAAACGAACGTCGATAGAGGTAGTGACCAAC TCTATGACGCATAGCGAGGTGAAGGCCATGGGAAGGCAAAGTGCTTAG |
Transcript | >Ani_SJS100_1|g5893.t1 ATGCTGCTCTGGATACGGGCGGTTGACGACAATGCCTCCCAGGCATCAGTCATCGTTATCCCGACTATTGTGACC ACGGTCATTGCCGTCGTCCTGACTCTGCTGCGGTTGTACGTGCGAAAGTTCGTCATGAGGACACTGTCCTGGGAT GACTGGTTCAACCTCCTCGCAACGTTGACCACTCTGGTCGCCATGGCCTTGATACTCGCTGCAGTTCCGTATGGT CTAGGGCGTCATTACGACACCCTCGATGTCGACCGTGCTGTGTACTGCGTCAAGCTCTTGCGGATGTGCCTCTTT CCGCTACTGTTCTCGACCATCTTCCTGAAGATCTCCATCAGTCTTCTCTTGATGAGGCTGTTTCTTACAACCAAG ATGTGGAAGATATTCTTTTGGTGCTTCATTGCCTTCAATACGGTCACGAGCCTCCTGGATGCCGCCATCGTCCTC CCTCAGTGTGATCCGGTGGCCCGCACATGGGACAAAAGAGTGGATGGGACCTGCTGGCCAAAGTCAGCAATTAAT GAGGCAGCCATTGCGCAAGGGGCAATTGCCGCTGGAACAGACATTGTGCTATCCATCCTACCAATCGTGTTTCTA TGGAAGGTTAAGATTCCGATCAAAGTGAAGGCAGCCATTTGTGGACTCATGGCCCTGGGATTTGCGAGCGCGGGT TTTGCACTTGCGCGAACACAGTACGTTTCCACTTTGACCGAGTCATCGGATCCTACGTGGGACTACATAAATCTC TACATGTGTGCTTTCCTGGAATCATCCATTGGAGTCATCGCTGCTGCTGCACCCTCCGTTAGACCCCTCCTTCGT CCTGGATTCTGGAACAAGGAATATTCCCGATCGAGATCCCGCTCGTTTCCATTGCACACATTGACCGCCAAGAAG AGCGCACGACCGGTGTGGGAAGATACTCTTTTCGATACCAGGTTCGATGTGGAAGACCGCCCGATCAATTCGAGA GACAGCGATTCCAAGCTGTGGCCACAGTTGAGCATGGCTATCGTGAAACGAACGTCGATAGAGGTAGTGACCAAC TCTATGACGCATAGCGAGGTGAAGGCCATGGGAAGGCAAAGTGCTTAG |
Gene | >Ani_SJS100_1|g5893.t1 ATGCTGCTCTGGATACGGGCGGTTGACGACAATGCCTCCCAGGCATCAGTCATCGTTATCCCGACTATTGTGACC ACGGTCATTGCCGTCGTCCTGACTCTGCTGCGGTTGTACGTGCGAAAGTTCGTCATGAGGACACTGTCCTGGGAT GACTGGTTCAACCTCCTCGCAACGGTAAGGGCTGCGCTTGCAGGACTGTTCGACGTTTCTTACTGATACCCCATG ACTCAGTTGACCACTCTGGTCGCCATGGCCTTGATACTCGCTGCAGTTCCGTATGGTCTAGGGCGTCATTACGAC ACCCTCGATGTCGACCGTGCTGTGTACTGCGTCAAGCTCTTGCGGATGTGCCTCTTTCCGCTACTGTTCTCGACC ATCTTCCTGAAGATCTCCATCAGTCTTCTCTTGATGAGGCTGTTGTATGTCTTTGCCTAAGGGTGACTTGATGGC ACAAAAGCTGACTCTGCGTATAGTCTTACAACCAAGATGTGGAAGATATTCTTTTGGTGCTTCATTGCCTTCAAT ACGGTCACGAGCCTCCTGGATGCCGCCATCGTCCTCCCTCAGTGTGATCCGGTGGCCCGCACATGGGACAAAAGA GTGGATGGGACCTGCTGGCCAAAGTCAGCAATTAATGAGGCAGCCATTGCGCAAGGGGGTAAGAATAACCTCTGA CATTTCTTGGGATCGCCTGCTAAGACACCAGCGTAGCAATTGCCGCTGGAACAGACATTGTGCTATCCATCCTAC CAATCGTGTTTCTATGGAAGGTTAAGATTCCGATCAAAGTGAAGGCAGCCATTTGTGGACTCATGGCCCTGGGAT TTGCGTGAGTCTATTATATGCTTAGGTTAGTGGTATGCTAACTATGATATAACAGGAGCGCGGGTTTTGCACTTG CGCGAACACAGTACGTTTCCACTTTGACCGAGTCATCGGATCCTACGTGTACGTGAACATACTTCGACTCAGCTC TAGCCATGACACTTCTAACATACTACCAGGGGACTACATAAATCTCTACATGTGTGCTTTGTGAGTCAGTTCCTT GACAATTACGCATGCACAATGCTAACAACCCCACAGCCTGGAATCATCCATTGGAGTCATCGCTGCTGCTGCACC CTCCGTTAGACCCCTCCTTCGTCCTGGATTCTGGAACAAGGAATATTCCCGATCGAGATCCCGCTCGTTTCCATT GCACACATTGACCGCCAAGAAGAGCGCACGACCGGTGTGGGAAGATACTCTTTTCGATACCAGGTTCGATGTGGA AGACCGCCCGATCAATTCGAGAGACAGCGATTCCAAGCTGTGGCCACAGTTGAGCATGGCTATCGTGAAACGAAC GTCGATAGAGGTAGTGACCAACTCTATGACGCATAGCGAGGTGAAGGCCATGGGAAGGCAAAGTGCTTAG |