Protein ID | Ani_SJS100_1|g5892.t1 |
Gene name | |
Location | scaffold_034:185420..187466 |
Strand | - |
Gene length (bp) | 2046 |
Transcript length (bp) | 2046 |
Coding sequence length (bp) | 2046 |
Protein length (aa) | 682 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 5.3E-09 | 92 | 129 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 8.6E-07 | 204 | 224 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 2.7E-02 | 363 | 379 |
PF07676 | PD40 | WD40-like Beta Propeller Repeat | 3.8E-03 | 513 | 532 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5892.t1 MRCSLISLLGLAAVPALAGCSFAHTANMDIDDIVKAHAHMSRGLVASKSSPSTVPTPSSTPSVGQKGVFMMNRIA PGTSELYIANTDGSNERPLLSNPVYEYHASFSPDGEWITFTSERNGDGNSDIYRVRTNGSDLQELVATPAVEDSV VISPNGRLAAYVSTANNMKANIWILDLQTGAQWNLTNTPTTAANSSLMESYLRPAWSPDGEWIAFSSDRNTQWDG HGVPTFLGRTGWETTQELSLYAIRPNGSDFRQIISKPYYSLGSPKWSADGKRIVYYEMTREDTYNAHRPEAITTA NSTIMSVDFETGTDVRVEVAGSGVKQFPQYLDKNGTIAYTLKGGTSEGFYTTAGLYVNTTSATLRSPAWSPDGKQ VVYEKTTWSIRAGYKQLYSWDSDWDYRFTDVFPQVSHQERIAITQKQLGNSSIVTLNTTGGDLQLVYDPSTADFV SDDETTGLSAYQPSWSPCGEWLVFGVGFWFETREASGGWIVRATANGSYAEVLVNSSYSITEDGALNNGFPSFSP DGKKVVYRVWGADTASYGNASEIGLRVLDLETRKTTVLTTEWDNLPQFSPDGELILFTRKTSTYNYDVCTIRPDG TDLRVLTSSGANDAHAVWSQDGRIMWSTGMYGFRFECALYDDTFQPYGQIMIMDADGGNKKLMTNSMWEDSMPLF LPLEVL* |
Coding | >Ani_SJS100_1|g5892.t1 ATGCGCTGCTCCCTCATCTCCCTTCTAGGCCTGGCGGCCGTCCCGGCCCTTGCAGGCTGTTCCTTCGCGCACACT GCGAATATGGACATTGATGACATTGTGAAAGCACACGCTCACATGTCTCGAGGGCTGGTTGCCTCCAAGAGCAGC CCCTCAACTGTTCCTACCCCCTCTAGCACCCCTTCTGTCGGGCAGAAAGGCGTGTTCATGATGAACCGCATTGCT CCTGGCACCTCCGAACTCTACATTGCCAACACAGATGGCAGTAATGAACGCCCACTCCTCTCCAATCCCGTCTAC GAGTACCACGCCTCCTTCTCCCCGGATGGAGAATGGATCACATTCACCAGCGAGCGCAATGGTGACGGTAACTCT GACATCTACCGCGTACGGACCAACGGCTCCGATCTCCAGGAATTGGTTGCCACGCCTGCAGTGGAAGACTCCGTC GTTATCTCTCCCAACGGCCGCCTGGCAGCCTACGTCTCCACCGCCAACAACATGAAGGCAAACATCTGGATCCTT GATCTGCAGACCGGCGCGCAGTGGAACCTCACTAACACGCCCACCACTGCCGCCAATTCCTCCCTCATGGAGAGC TATCTCCGTCCTGCCTGGTCTCCCGATGGCGAATGGATAGCCTTCTCTTCGGACCGCAACACCCAATGGGACGGA CACGGCGTACCGACCTTCCTCGGCCGCACGGGCTGGGAAACGACACAGGAACTCTCACTCTACGCCATCCGCCCC AATGGCTCTGACTTCCGTCAGATCATCTCCAAGCCATACTACTCCCTGGGATCTCCGAAGTGGTCAGCAGACGGT AAACGCATCGTCTACTATGAAATGACCCGGGAAGACACCTACAATGCCCATCGTCCAGAAGCCATAACCACAGCC AACTCCACCATCATGTCCGTAGACTTCGAGACAGGCACCGATGTGCGCGTGGAAGTCGCCGGCTCCGGTGTCAAG CAATTCCCCCAGTACCTGGACAAGAACGGCACCATCGCCTACACCCTCAAAGGCGGCACCAGCGAGGGCTTCTAC ACCACCGCAGGACTCTACGTCAACACGACCTCGGCGACCCTCCGGTCCCCGGCGTGGTCCCCCGACGGCAAGCAA GTAGTCTACGAAAAGACCACCTGGAGCATCCGCGCGGGGTACAAGCAGCTCTACAGCTGGGACAGTGACTGGGAC TACCGCTTCACGGACGTCTTCCCTCAGGTCTCGCACCAGGAGCGCATCGCCATCACACAGAAGCAGCTGGGCAAT TCGTCCATCGTGACGTTGAACACAACCGGAGGCGACTTGCAACTCGTCTACGACCCGAGCACGGCGGACTTTGTC AGCGATGACGAAACCACAGGATTGAGCGCTTACCAGCCCAGCTGGTCACCCTGCGGCGAGTGGCTCGTCTTCGGC GTCGGATTCTGGTTCGAGACGAGAGAAGCCTCGGGCGGATGGATCGTGCGGGCCACCGCCAACGGCAGCTACGCC GAGGTACTCGTGAACAGCAGCTACTCCATCACCGAGGATGGAGCCCTGAATAACGGGTTCCCGAGTTTCTCGCCG GACGGCAAGAAAGTGGTGTATCGGGTTTGGGGAGCCGACACTGCAAGCTACGGCAACGCCAGCGAGATCGGGCTG CGGGTGCTGGACCTCGAGACGCGAAAGACAACCGTCCTGACCACAGAATGGGATAATCTGCCCCAGTTCTCTCCC GATGGGGAGCTCATCCTATTCACACGCAAAACCAGCACGTACAACTATGATGTGTGTACTATCCGGCCGGATGGG ACAGACCTACGCGTGTTGACGAGCAGCGGTGCTAATGATGCGCATGCGGTGTGGTCGCAGGATGGGCGGATCATG TGGTCTACTGGCATGTATGGGTTCCGGTTTGAGTGTGCGCTGTATGATGATACGTTCCAGCCGTATGGGCAGATT ATGATTATGGATGCGGATGGGGGGAATAAGAAGTTGATGACCAACTCGATGTGGGAGGATTCGATGCCATTGTTC TTGCCGCTGGAGGTACTTTAA |
Transcript | >Ani_SJS100_1|g5892.t1 ATGCGCTGCTCCCTCATCTCCCTTCTAGGCCTGGCGGCCGTCCCGGCCCTTGCAGGCTGTTCCTTCGCGCACACT GCGAATATGGACATTGATGACATTGTGAAAGCACACGCTCACATGTCTCGAGGGCTGGTTGCCTCCAAGAGCAGC CCCTCAACTGTTCCTACCCCCTCTAGCACCCCTTCTGTCGGGCAGAAAGGCGTGTTCATGATGAACCGCATTGCT CCTGGCACCTCCGAACTCTACATTGCCAACACAGATGGCAGTAATGAACGCCCACTCCTCTCCAATCCCGTCTAC GAGTACCACGCCTCCTTCTCCCCGGATGGAGAATGGATCACATTCACCAGCGAGCGCAATGGTGACGGTAACTCT GACATCTACCGCGTACGGACCAACGGCTCCGATCTCCAGGAATTGGTTGCCACGCCTGCAGTGGAAGACTCCGTC GTTATCTCTCCCAACGGCCGCCTGGCAGCCTACGTCTCCACCGCCAACAACATGAAGGCAAACATCTGGATCCTT GATCTGCAGACCGGCGCGCAGTGGAACCTCACTAACACGCCCACCACTGCCGCCAATTCCTCCCTCATGGAGAGC TATCTCCGTCCTGCCTGGTCTCCCGATGGCGAATGGATAGCCTTCTCTTCGGACCGCAACACCCAATGGGACGGA CACGGCGTACCGACCTTCCTCGGCCGCACGGGCTGGGAAACGACACAGGAACTCTCACTCTACGCCATCCGCCCC AATGGCTCTGACTTCCGTCAGATCATCTCCAAGCCATACTACTCCCTGGGATCTCCGAAGTGGTCAGCAGACGGT AAACGCATCGTCTACTATGAAATGACCCGGGAAGACACCTACAATGCCCATCGTCCAGAAGCCATAACCACAGCC AACTCCACCATCATGTCCGTAGACTTCGAGACAGGCACCGATGTGCGCGTGGAAGTCGCCGGCTCCGGTGTCAAG CAATTCCCCCAGTACCTGGACAAGAACGGCACCATCGCCTACACCCTCAAAGGCGGCACCAGCGAGGGCTTCTAC ACCACCGCAGGACTCTACGTCAACACGACCTCGGCGACCCTCCGGTCCCCGGCGTGGTCCCCCGACGGCAAGCAA GTAGTCTACGAAAAGACCACCTGGAGCATCCGCGCGGGGTACAAGCAGCTCTACAGCTGGGACAGTGACTGGGAC TACCGCTTCACGGACGTCTTCCCTCAGGTCTCGCACCAGGAGCGCATCGCCATCACACAGAAGCAGCTGGGCAAT TCGTCCATCGTGACGTTGAACACAACCGGAGGCGACTTGCAACTCGTCTACGACCCGAGCACGGCGGACTTTGTC AGCGATGACGAAACCACAGGATTGAGCGCTTACCAGCCCAGCTGGTCACCCTGCGGCGAGTGGCTCGTCTTCGGC GTCGGATTCTGGTTCGAGACGAGAGAAGCCTCGGGCGGATGGATCGTGCGGGCCACCGCCAACGGCAGCTACGCC GAGGTACTCGTGAACAGCAGCTACTCCATCACCGAGGATGGAGCCCTGAATAACGGGTTCCCGAGTTTCTCGCCG GACGGCAAGAAAGTGGTGTATCGGGTTTGGGGAGCCGACACTGCAAGCTACGGCAACGCCAGCGAGATCGGGCTG CGGGTGCTGGACCTCGAGACGCGAAAGACAACCGTCCTGACCACAGAATGGGATAATCTGCCCCAGTTCTCTCCC GATGGGGAGCTCATCCTATTCACACGCAAAACCAGCACGTACAACTATGATGTGTGTACTATCCGGCCGGATGGG ACAGACCTACGCGTGTTGACGAGCAGCGGTGCTAATGATGCGCATGCGGTGTGGTCGCAGGATGGGCGGATCATG TGGTCTACTGGCATGTATGGGTTCCGGTTTGAGTGTGCGCTGTATGATGATACGTTCCAGCCGTATGGGCAGATT ATGATTATGGATGCGGATGGGGGGAATAAGAAGTTGATGACCAACTCGATGTGGGAGGATTCGATGCCATTGTTC TTGCCGCTGGAGGTACTTTAA |
Gene | >Ani_SJS100_1|g5892.t1 ATGCGCTGCTCCCTCATCTCCCTTCTAGGCCTGGCGGCCGTCCCGGCCCTTGCAGGCTGTTCCTTCGCGCACACT GCGAATATGGACATTGATGACATTGTGAAAGCACACGCTCACATGTCTCGAGGGCTGGTTGCCTCCAAGAGCAGC CCCTCAACTGTTCCTACCCCCTCTAGCACCCCTTCTGTCGGGCAGAAAGGCGTGTTCATGATGAACCGCATTGCT CCTGGCACCTCCGAACTCTACATTGCCAACACAGATGGCAGTAATGAACGCCCACTCCTCTCCAATCCCGTCTAC GAGTACCACGCCTCCTTCTCCCCGGATGGAGAATGGATCACATTCACCAGCGAGCGCAATGGTGACGGTAACTCT GACATCTACCGCGTACGGACCAACGGCTCCGATCTCCAGGAATTGGTTGCCACGCCTGCAGTGGAAGACTCCGTC GTTATCTCTCCCAACGGCCGCCTGGCAGCCTACGTCTCCACCGCCAACAACATGAAGGCAAACATCTGGATCCTT GATCTGCAGACCGGCGCGCAGTGGAACCTCACTAACACGCCCACCACTGCCGCCAATTCCTCCCTCATGGAGAGC TATCTCCGTCCTGCCTGGTCTCCCGATGGCGAATGGATAGCCTTCTCTTCGGACCGCAACACCCAATGGGACGGA CACGGCGTACCGACCTTCCTCGGCCGCACGGGCTGGGAAACGACACAGGAACTCTCACTCTACGCCATCCGCCCC AATGGCTCTGACTTCCGTCAGATCATCTCCAAGCCATACTACTCCCTGGGATCTCCGAAGTGGTCAGCAGACGGT AAACGCATCGTCTACTATGAAATGACCCGGGAAGACACCTACAATGCCCATCGTCCAGAAGCCATAACCACAGCC AACTCCACCATCATGTCCGTAGACTTCGAGACAGGCACCGATGTGCGCGTGGAAGTCGCCGGCTCCGGTGTCAAG CAATTCCCCCAGTACCTGGACAAGAACGGCACCATCGCCTACACCCTCAAAGGCGGCACCAGCGAGGGCTTCTAC ACCACCGCAGGACTCTACGTCAACACGACCTCGGCGACCCTCCGGTCCCCGGCGTGGTCCCCCGACGGCAAGCAA GTAGTCTACGAAAAGACCACCTGGAGCATCCGCGCGGGGTACAAGCAGCTCTACAGCTGGGACAGTGACTGGGAC TACCGCTTCACGGACGTCTTCCCTCAGGTCTCGCACCAGGAGCGCATCGCCATCACACAGAAGCAGCTGGGCAAT TCGTCCATCGTGACGTTGAACACAACCGGAGGCGACTTGCAACTCGTCTACGACCCGAGCACGGCGGACTTTGTC AGCGATGACGAAACCACAGGATTGAGCGCTTACCAGCCCAGCTGGTCACCCTGCGGCGAGTGGCTCGTCTTCGGC GTCGGATTCTGGTTCGAGACGAGAGAAGCCTCGGGCGGATGGATCGTGCGGGCCACCGCCAACGGCAGCTACGCC GAGGTACTCGTGAACAGCAGCTACTCCATCACCGAGGATGGAGCCCTGAATAACGGGTTCCCGAGTTTCTCGCCG GACGGCAAGAAAGTGGTGTATCGGGTTTGGGGAGCCGACACTGCAAGCTACGGCAACGCCAGCGAGATCGGGCTG CGGGTGCTGGACCTCGAGACGCGAAAGACAACCGTCCTGACCACAGAATGGGATAATCTGCCCCAGTTCTCTCCC GATGGGGAGCTCATCCTATTCACACGCAAAACCAGCACGTACAACTATGATGTGTGTACTATCCGGCCGGATGGG ACAGACCTACGCGTGTTGACGAGCAGCGGTGCTAATGATGCGCATGCGGTGTGGTCGCAGGATGGGCGGATCATG TGGTCTACTGGCATGTATGGGTTCCGGTTTGAGTGTGCGCTGTATGATGATACGTTCCAGCCGTATGGGCAGATT ATGATTATGGATGCGGATGGGGGGAATAAGAAGTTGATGACCAACTCGATGTGGGAGGATTCGATGCCATTGTTC TTGCCGCTGGAGGTACTTTAA |