Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5866.t1
Gene name
Locationscaffold_034:115424..116386
Strand+
Gene length (bp)962
Transcript length (bp)900
Coding sequence length (bp)900
Protein length (aa) 300

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00581 Rhodanese Rhodanese-like domain 1.5E-04 40 122
PF00581 Rhodanese Rhodanese-like domain 7.6E-10 174 288

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 33 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5866.t1
MGPISSLLVSPAELHHLLKAASTAFRIVPVAAGNHSTLPSFESRHVPNSVFFNMDAVKDTNSPYPMMLPSSAQFA
TYMAERGIRRDDVLVIYDTFETGLRLSPRVAWTCQHFGHKNVHVLNNFANYVKEGFPVASGQMRTPVSSTTSEMD
EATSIDPDPEADNVITFEHLRCMVKDPSQKGKFQIIDARPNDLFSGRAAANGASASVRLGHMPSAINVPFDSVLG
LDKTFLPPAELRDQFVKWRVREDVPAVLTCNSGVTAAVVDLALRVAGLNVKTSLYDGSWSEWADRVDEDGLIVI*
Coding >Ani_SJS100_1|g5866.t1
ATGGGGCCAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTTACTTAAAGCTGCCTCAACTGCATTC
CGAATTGTCCCTGTCGCAGCGGGAAACCACTCCACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGTG
TTCTTCAACATGGATGCAGTCAAAGACACCAACTCACCCTACCCGATGATGCTGCCCTCTTCAGCCCAGTTTGCA
ACGTACATGGCAGAGCGTGGCATCCGCCGGGATGACGTTCTAGTCATCTACGACACCTTCGAGACGGGTCTCCGC
TTGTCTCCCCGTGTCGCATGGACCTGTCAGCACTTCGGACACAAGAATGTTCACGTATTGAACAATTTTGCCAAC
TACGTAAAAGAGGGGTTTCCCGTCGCTTCCGGGCAGATGCGGACGCCAGTGTCTTCGACAACTAGCGAGATGGAT
GAAGCTACCAGCATTGATCCGGACCCCGAGGCAGACAACGTGATTACCTTCGAGCACTTACGTTGTATGGTTAAG
GACCCATCGCAGAAAGGAAAATTTCAGATCATCGATGCCAGACCAAATGACTTGTTTTCTGGACGTGCTGCAGCC
AACGGCGCGAGTGCTTCTGTGAGATTGGGACATATGCCATCTGCTATCAATGTTCCTTTTGATTCCGTTCTTGGT
CTAGACAAAACATTCCTTCCTCCGGCAGAGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGAGAAGACGTGCCG
GCTGTGTTGACCTGTAATAGCGGTGTTACTGCTGCAGTGGTAGATCTGGCGCTGCGGGTGGCTGGCCTGAATGTG
AAGACGAGCCTTTATGATGGGAGTTGGAGTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTGATTGTTATATAA
Transcript >Ani_SJS100_1|g5866.t1
ATGGGGCCAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTTACTTAAAGCTGCCTCAACTGCATTC
CGAATTGTCCCTGTCGCAGCGGGAAACCACTCCACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGTG
TTCTTCAACATGGATGCAGTCAAAGACACCAACTCACCCTACCCGATGATGCTGCCCTCTTCAGCCCAGTTTGCA
ACGTACATGGCAGAGCGTGGCATCCGCCGGGATGACGTTCTAGTCATCTACGACACCTTCGAGACGGGTCTCCGC
TTGTCTCCCCGTGTCGCATGGACCTGTCAGCACTTCGGACACAAGAATGTTCACGTATTGAACAATTTTGCCAAC
TACGTAAAAGAGGGGTTTCCCGTCGCTTCCGGGCAGATGCGGACGCCAGTGTCTTCGACAACTAGCGAGATGGAT
GAAGCTACCAGCATTGATCCGGACCCCGAGGCAGACAACGTGATTACCTTCGAGCACTTACGTTGTATGGTTAAG
GACCCATCGCAGAAAGGAAAATTTCAGATCATCGATGCCAGACCAAATGACTTGTTTTCTGGACGTGCTGCAGCC
AACGGCGCGAGTGCTTCTGTGAGATTGGGACATATGCCATCTGCTATCAATGTTCCTTTTGATTCCGTTCTTGGT
CTAGACAAAACATTCCTTCCTCCGGCAGAGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGAGAAGACGTGCCG
GCTGTGTTGACCTGTAATAGCGGTGTTACTGCTGCAGTGGTAGATCTGGCGCTGCGGGTGGCTGGCCTGAATGTG
AAGACGAGCCTTTATGATGGGAGTTGGAGTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTGATTGTTATATAA
Gene >Ani_SJS100_1|g5866.t1
ATGGGGCCAATTTCGTCTCTCCTCGTCTCACCGGCCGAGCTACATCACTTACTTAAAGCTGCCTCAACTGCATTC
CGAATTGTCCCTGTCGCAGCGGGAAACCACTCCACGCTTCCATCCTTCGAATCTCGTCATGTACCCAACTCTGTG
TAAGCCAATCCTCCACCTACTCTGTCCGTTTGACCTCCATCTGATTACAATCAAACAAAAGGTTCTTCAACATGG
ATGCAGTCAAAGACACCAACTCACCCTACCCGATGATGCTGCCCTCTTCAGCCCAGTTTGCAACGTACATGGCAG
AGCGTGGCATCCGCCGGGATGACGTTCTAGTCATCTACGACACCTTCGAGACGGGTCTCCGCTTGTCTCCCCGTG
TCGCATGGACCTGTCAGCACTTCGGACACAAGAATGTTCACGTATTGAACAATTTTGCCAACTACGTAAAAGAGG
GGTTTCCCGTCGCTTCCGGGCAGATGCGGACGCCAGTGTCTTCGACAACTAGCGAGATGGATGAAGCTACCAGCA
TTGATCCGGACCCCGAGGCAGACAACGTGATTACCTTCGAGCACTTACGTTGTATGGTTAAGGACCCATCGCAGA
AAGGAAAATTTCAGATCATCGATGCCAGACCAAATGACTTGTTTTCTGGACGTGCTGCAGCCAACGGCGCGAGTG
CTTCTGTGAGATTGGGACATATGCCATCTGCTATCAATGTTCCTTTTGATTCCGTTCTTGGTCTAGACAAAACAT
TCCTTCCTCCGGCAGAGCTAAGGGACCAGTTCGTGAAATGGAGAGTAAGAGAAGACGTGCCGGCTGTGTTGACCT
GTAATAGCGGTGTTACTGCTGCAGTGGTAGATCTGGCGCTGCGGGTGGCTGGCCTGAATGTGAAGACGAGCCTTT
ATGATGGGAGTTGGAGTGAGTGGGCTGATCGAGTGGATGAAGATGGTTTGATTGTTATATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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