© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5846.t1 |
| Gene name | |
| Location | scaffold_034:58425..59963 |
| Strand | + |
| Gene length (bp) | 1538 |
| Transcript length (bp) | 1257 |
| Coding sequence length (bp) | 1257 |
| Protein length (aa) | 419 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.8E-12 | 71 | 300 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 70 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 46 | 68 | 22 |
| 2 | 80 | 102 | 22 |
| 3 | 112 | 131 | 19 |
| 4 | 144 | 166 | 22 |
| 5 | 181 | 200 | 19 |
| 6 | 217 | 239 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5846.t1 MPSASPTLSLSDHDDESQEDSVPLIVMNEAQEELQDTSPPADIFEVLVLASGFGTLQLVFALLASYGSAQLLSVG ISQAATGLAWLAGPLAGTFFQPLIGIMSDKFGHQKTIVATGVIGLVASLLGLGWASDLKEQSSEITRALVLLFIC TLNLAVQPVQLGLRVLIIEVCRPEQQIMASAWVTRMIGIGNILAQLAGSVDTTKLRPFTTGSHFKDLCLLTSIGL IVTAIGLGLFVRTVADPISSSVRRKNQQSRLIGPWKAVRTVFPGAMSVWRVQVFSWMGWFQFLYYATMYIDSLAL QDLLQDAKITDEEGQHSIRTESLQFGPRAMLLNACVSKVQQSPNAIKHLGDIPGTVRSRHDTHFMGIVSYRCNIH YQHSWPQLVLHGLDPLYIDEYENLTGIEERLTSPQSGFNNEFA* |
| Coding | >Ani_SJS100_1|g5846.t1 ATGCCTTCTGCTAGCCCGACACTGTCATTATCCGATCACGATGATGAGAGCCAGGAAGATTCTGTACCTCTAATC GTCATGAACGAGGCACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTTCTGGCT AGTGGATTTGGGACACTACAGCTTGTATTTGCTCTCTTGGCCTCATATGGATCTGCACAGCTACTGTCCGTTGGG ATCAGCCAAGCGGCAACGGGATTGGCCTGGCTGGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATCGGT ATAATGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTGGCGTCATTGGTCTCGTCGCATCGCTTTTA GGGCTCGGCTGGGCGTCAGATCTGAAAGAGCAAAGCAGTGAAATAACCAGGGCTTTGGTGTTATTATTTATTTGC ACTCTGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACTAATCATAGAAGTCTGTCGTCCGGAACAG CAGATCATGGCGTCTGCTTGGGTTACGCGCATGATCGGGATAGGAAATATTCTTGCGCAGCTGGCTGGATCGGTT GACACGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGGATTTATGTCTGCTGACGTCGATTGGGCTC ATTGTTACTGCAATAGGTCTGGGCCTATTTGTTAGGACCGTGGCGGATCCCATATCTTCATCTGTGAGACGAAAG AATCAGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGTTTTTCCGGGTGCAATGAGCGTTTGGAGG GTTCAGGTATTTTCTTGGATGGGGTGGTTCCAATTTCTCTACTATGCCACTATGTACATCGATTCTCTTGCTTTA CAAGATCTCCTGCAGGATGCAAAGATAACAGACGAGGAAGGTCAACATTCCATCAGAACGGAGTCTTTACAATTC GGGCCCAGAGCAATGCTTCTAAACGCTTGCGTATCGAAAGTCCAGCAATCACCTAACGCTATCAAACATCTGGGC GATATCCCAGGCACTGTTCGGAGCAGGCATGATACTCACTTTATGGGTATCGTCAGTTATCGGTGCAACATTCAT TATCAGCATTCTTGGCCTCAGCTGGTGCTGCACGGCCTGGATCCCCTTTACATTGATGAGTACGAAAATCTTACA GGAATCGAGGAACGCCTTACGTCCCCACAATCCGGGTTTAATAATGAGTTTGCATAA |
| Transcript | >Ani_SJS100_1|g5846.t1 ATGCCTTCTGCTAGCCCGACACTGTCATTATCCGATCACGATGATGAGAGCCAGGAAGATTCTGTACCTCTAATC GTCATGAACGAGGCACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTTCTGGCT AGTGGATTTGGGACACTACAGCTTGTATTTGCTCTCTTGGCCTCATATGGATCTGCACAGCTACTGTCCGTTGGG ATCAGCCAAGCGGCAACGGGATTGGCCTGGCTGGCCGGACCGCTTGCGGGGACTTTCTTTCAGCCTTTGATCGGT ATAATGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTGGCGTCATTGGTCTCGTCGCATCGCTTTTA GGGCTCGGCTGGGCGTCAGATCTGAAAGAGCAAAGCAGTGAAATAACCAGGGCTTTGGTGTTATTATTTATTTGC ACTCTGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTACTAATCATAGAAGTCTGTCGTCCGGAACAG CAGATCATGGCGTCTGCTTGGGTTACGCGCATGATCGGGATAGGAAATATTCTTGCGCAGCTGGCTGGATCGGTT GACACGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGGATTTATGTCTGCTGACGTCGATTGGGCTC ATTGTTACTGCAATAGGTCTGGGCCTATTTGTTAGGACCGTGGCGGATCCCATATCTTCATCTGTGAGACGAAAG AATCAGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTGTTTTTCCGGGTGCAATGAGCGTTTGGAGG GTTCAGGTATTTTCTTGGATGGGGTGGTTCCAATTTCTCTACTATGCCACTATGTACATCGATTCTCTTGCTTTA CAAGATCTCCTGCAGGATGCAAAGATAACAGACGAGGAAGGTCAACATTCCATCAGAACGGAGTCTTTACAATTC GGGCCCAGAGCAATGCTTCTAAACGCTTGCGTATCGAAAGTCCAGCAATCACCTAACGCTATCAAACATCTGGGC GATATCCCAGGCACTGTTCGGAGCAGGCATGATACTCACTTTATGGGTATCGTCAGTTATCGGTGCAACATTCAT TATCAGCATTCTTGGCCTCAGCTGGTGCTGCACGGCCTGGATCCCCTTTACATTGATGAGTACGAAAATCTTACA GGAATCGAGGAACGCCTTACGTCCCCACAATCCGGGTTTAATAATGAGTTTGCATAA |
| Gene | >Ani_SJS100_1|g5846.t1 ATGCCTTCTGCTAGCCCGACACTGTCATTATCCGATCACGATGATGAGAGCCAGGAAGATTCTGTACCTCTAATC GTCATGAACGAGGCACAGGAAGAGCTGCAAGATACCAGTCCGCCGGCAGATATCTTCGAAGTACTTGTTCTGGCT AGTGGATTTGGGACGTGAGTTCTTCACTTGGTGGACAATTGCGGTTTGGGGCTAACATGTTATTAGACTACAGCT TGTATTTGCTCTCTTGGCCTCATATGGATCTGTGATACAGCCCTCCACACTACTTACGTGTACCAGCTAACAGTA ATACCCAGGCACAGCTACTGTCCGTTGGGATCAGCCAAGCGGCAACGGGATTGGCCTGGCTGGCCGGACCGCTTG CGGGGACTTTCTTTCAGCCTTTGATCGGTATAATGAGTGACAAATTTGGTCATCAGAAAACAATCGTCGCTACTG GCGTCATTGGTCTCGTCGCATCGCTTTTAGGGCTCGGCTGGGCGTCAGATCTGAAAGAGCAAAGCAGTGAAATAA CCAGGGCTTTGGTGTTATTATTTATTTGCACTCTGAACCTTGCCGTGCAGCCAGTTCAGCTCGGTCTACGGGTAC TAATCATAGAAGTCTGTCGTCCGGAACAGCAGATCATGGCGTCTGCTTGGGTTACGCGCATGATCGGGATAGGAA ATATTCTTGCGCAGCTGGCTGGATCGGTTGACACGACGAAGTTACGACCGTTCACGACTGGGAGCCATTTTAAGG ATTTATGTCTGCTGACGTCGATTGGGCTCATTGTTACTGCAATAGGTCTGGGCCTATTTGTTAGGACCGTGGCGG ATCCCATATCTTCATCTGTGAGACGAAAGAATCAGCAAAGCAGGCTCATAGGGCCGTGGAAGGCCGTAAGGACTG TTTTTCCGGGTGCAATGAGCGTTTGGAGGGTTCAGGTATTTTCTTGGATGGGGTGGTTCCAATTTCTCTACTATG CCACTATGTGAGTGATCTCTGTTGTCGTCATATAAAGTGAACTAATCGTTCTAAATGATTGATTGCTGCAGGTAC ATCGATTCTCTTGGTAAGATTCGAGTGACATGTGTTCGAGCGCTGGAGCTTCTGCTGACTCACCTAACAGCTTTA CAAGATCTCCTGCAGGATGCAAAGATAACAGACGAGGAAGGTCAACATTCCATCAGAACGGAGTCTTTACAATTC GGGCCCAGAGCAATGCTTCTAAACGCTTGCGTATCGTTCGTTTCAAGCATGCTACTTCCCTGGCTATTCAAATAC AATGAGCGGTCAAAAGGAAAGTCCAGCAATCACCTAACGCTATCAAACATCTGGGCGATATCCCAGGCACTGTTC GGAGCAGGCATGATACTCACTTTATGGGTATCGTCAGTTATCGGTGCAACATTCATTATCAGCATTCTTGGCCTC AGCTGGTGCTGCACGGCCTGGATCCCCTTTACATTGATGAGTACGAAAATCTTACAGGAATCGAGGAACGCCTTA CGTCCCCACAATCCGGGTTTAATAATGAGTTTGCATAA |