Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5822.t1
Gene name
Location	scaffold_034:349..1132
Strand	+
Gene length (bp)	783
Transcript length (bp)	513
Coding sequence length (bp)	513
Protein length (aa)	171

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05241	EBP	EXPERA (EXPanded EBP superfamily)	2.9E-20	49	155

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 36	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	17	39	22
2	71	93	22
3	105	127	22
4	137	159	22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5822.t1 MASPTAPASLWSRKRDLIYFSFFAIHVPIIFLVDAAPILPTALQSNLSHTLRQFYIDTYHDKFFEEPPAPWFYFF ILMELFYHVPVSVWALGGLKRDDPLVPVHLLIFGLQAFLTSTVCLVEVWSWADRTVAQKQNISMLYGPYVALGAF MALDMFFRLRTRLLVKSKKE*
Coding	>Ani_SJS100_1\|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCTGGTCGACGCAGCCCCGATCCTCCCCACCGCCCTCCAATCCAACCTTTCCCACACT CTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCACCAGCCCCCTGGTTCTACTTTTTC ATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCGGCCTGAAGAGAGATGACCCTCTT GTCCCCGTTCACCTCCTCATTTTTGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGT TGGGCAGATCGCACCGTAGCCCAAAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTGCATTT ATGGCACTGGATATGTTCTTTAGACTTCGGACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA
Transcript	>Ani_SJS100_1\|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCTGGTCGACGCAGCCCCGATCCTCCCCACCGCCCTCCAATCCAACCTTTCCCACACT CTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCACCAGCCCCCTGGTTCTACTTTTTC ATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCGGCCTGAAGAGAGATGACCCTCTT GTCCCCGTTCACCTCCTCATTTTTGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGT TGGGCAGATCGCACCGTAGCCCAAAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTGCATTT ATGGCACTGGATATGTTCTTTAGACTTCGGACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA
Gene	>Ani_SJS100_1\|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCGTAAGTCGGTCAAAAGTTGCCCTTTCCACTGATATACAGAAACTCGTTACGTAGTC CCGAAACCCACTAGCTGACTATCAATCAATCAATCCTCCTAGTGGTCGACGCAGCCCCGATCCTCCCCACCGCCC TCCAATCCAACCTTTCCCACACTCTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCAC CAGCCCCCTGGTTCTACTTTTTCATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCG GCCTGAAGAGAGGTGCGGATCTACACCCTACTATTATACACTATACCTACTGTTACATCATAGCGCTCGGTACCT CTCTATCTCGACTAGGAGCTAACGAGTGGATTTCATGACAGATGACCCTCTTGTCCCCGTTCACCTCCTCATTTT TGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGTTGGGCAGATCGCACCGTAGCCCA AAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTAAGTAGATGCTGCATGCACCCTGGGCATG TAAGCCAAGCTGGACTGCTGCTGACTCACTCTGATAGGTGCATTTATGGCACTGGATATGTTCTTTAGACTTCGG ACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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