Protein ID | Ani_SJS100_1|g5822.t1 |
Gene name | |
Location | scaffold_034:349..1132 |
Strand | + |
Gene length (bp) | 783 |
Transcript length (bp) | 513 |
Coding sequence length (bp) | 513 |
Protein length (aa) | 171 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05241 | EBP | EXPERA (EXPanded EBP superfamily) | 2.9E-20 | 49 | 155 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 36 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 17 | 39 | 22 |
2 | 71 | 93 | 22 |
3 | 105 | 127 | 22 |
4 | 137 | 159 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5822.t1 MASPTAPASLWSRKRDLIYFSFFAIHVPIIFLVDAAPILPTALQSNLSHTLRQFYIDTYHDKFFEEPPAPWFYFF ILMELFYHVPVSVWALGGLKRDDPLVPVHLLIFGLQAFLTSTVCLVEVWSWADRTVAQKQNISMLYGPYVALGAF MALDMFFRLRTRLLVKSKKE* |
Coding | >Ani_SJS100_1|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCTGGTCGACGCAGCCCCGATCCTCCCCACCGCCCTCCAATCCAACCTTTCCCACACT CTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCACCAGCCCCCTGGTTCTACTTTTTC ATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCGGCCTGAAGAGAGATGACCCTCTT GTCCCCGTTCACCTCCTCATTTTTGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGT TGGGCAGATCGCACCGTAGCCCAAAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTGCATTT ATGGCACTGGATATGTTCTTTAGACTTCGGACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA |
Transcript | >Ani_SJS100_1|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCTGGTCGACGCAGCCCCGATCCTCCCCACCGCCCTCCAATCCAACCTTTCCCACACT CTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCACCAGCCCCCTGGTTCTACTTTTTC ATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCGGCCTGAAGAGAGATGACCCTCTT GTCCCCGTTCACCTCCTCATTTTTGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGT TGGGCAGATCGCACCGTAGCCCAAAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTGCATTT ATGGCACTGGATATGTTCTTTAGACTTCGGACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA |
Gene | >Ani_SJS100_1|g5822.t1 ATGGCTTCTCCGACTGCTCCCGCCTCTCTGTGGAGCCGGAAACGCGACCTGATCTACTTCTCCTTCTTCGCTATC CACGTCCCCATCATCTTCCGTAAGTCGGTCAAAAGTTGCCCTTTCCACTGATATACAGAAACTCGTTACGTAGTC CCGAAACCCACTAGCTGACTATCAATCAATCAATCCTCCTAGTGGTCGACGCAGCCCCGATCCTCCCCACCGCCC TCCAATCCAACCTTTCCCACACTCTCCGTCAGTTCTACATCGATACGTACCATGACAAGTTCTTTGAGGAGCCAC CAGCCCCCTGGTTCTACTTTTTCATACTCATGGAGTTATTCTACCATGTGCCAGTAAGCGTCTGGGCGCTTGGCG GCCTGAAGAGAGGTGCGGATCTACACCCTACTATTATACACTATACCTACTGTTACATCATAGCGCTCGGTACCT CTCTATCTCGACTAGGAGCTAACGAGTGGATTTCATGACAGATGACCCTCTTGTCCCCGTTCACCTCCTCATTTT TGGTCTTCAGGCCTTCCTTACCTCCACAGTCTGTCTGGTTGAGGTCTGGAGTTGGGCAGATCGCACCGTAGCCCA AAAGCAGAACATCAGCATGCTATATGGGCCCTATGTCGCTCTTGGTAAGTAGATGCTGCATGCACCCTGGGCATG TAAGCCAAGCTGGACTGCTGCTGACTCACTCTGATAGGTGCATTTATGGCACTGGATATGTTCTTTAGACTTCGG ACCAGACTGCTGGTCAAGTCTAAGAAGGAGTAA |