Protein ID | Ani_SJS100_1|g5789.t1 |
Gene name | |
Location | scaffold_033:249081..250932 |
Strand | - |
Gene length (bp) | 1851 |
Transcript length (bp) | 1551 |
Coding sequence length (bp) | 1551 |
Protein length (aa) | 517 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF13520 | AA_permease_2 | Amino acid permease | 6.9E-75 | 43 | 489 |
PF00324 | AA_permease | Amino acid permease | 3.7E-15 | 67 | 489 |
GO Term | Description | Terminal node |
---|---|---|
GO:0055085 | transmembrane transport | Yes |
GO:0016020 | membrane | Yes |
GO:0022857 | transmembrane transporter activity | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0009987 | cellular process | No |
GO:0005215 | transporter activity | No |
GO:0006810 | transport | No |
GO:0003674 | molecular_function | No |
Domain # | Start | End | Length |
---|---|---|---|
1 | 42 | 59 | 17 |
2 | 74 | 96 | 22 |
3 | 125 | 147 | 22 |
4 | 167 | 186 | 19 |
5 | 193 | 215 | 22 |
6 | 235 | 257 | 22 |
7 | 278 | 300 | 22 |
8 | 327 | 349 | 22 |
9 | 379 | 401 | 22 |
10 | 406 | 428 | 22 |
11 | 448 | 470 | 22 |
12 | 480 | 502 | 22 |
Orthofinder run ID | 3 |
Orthogroup | 6066 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5789.t1 MLDEEVEMKSGSAVQSTVADGRPHGAASSSIEYRQRQKLDRYLNFFSSLAFSATLLASWESAGGSLQAGLFNGGP AAIVYGIIMSGVGNLAIATSLAELASVHPTAGAQYHWSYVLAPRYRRFISFFQGWVTFFSWAALVCISPYFIGTE IEGMAILAYPDYDAKRWQGTLLMWAVVLIPIIINIFARRLLAIIEVAAGVMHVVFLPVMIATFVILAPRNSNAFV WDTFVSGLSGWENPGVVYSVGLLGVITPLSGVDGIIHMSEEVKNAKVVIPRSMIYGTIINSVMAFGYLIAVLYCM GDYTAALTSPTGYPIITIAYQATGSKAATYVLMAMGMLPGWIALFNGLASVTRLTWAFARDNGLPFSDFFVKVDP RFKIPIRALFLVTTLVILLSFIQIGSSAAFNAILSLSTLGLYISYLIPLVLLVWKRFTAPKDIPQGTFSLGKWGL PINLVAILFATYFSIFLPFPSEVPVTGETMNYAGPVLGFVMLFACGDWLVRGRHKWNGPTMAYSRE* |
Coding | >Ani_SJS100_1|g5789.t1 ATGCTCGACGAGGAGGTTGAGATGAAAAGCGGCAGCGCCGTCCAATCCACAGTTGCTGATGGACGCCCTCATGGT GCCGCAAGCAGCAGCATCGAATATCGTCAGCGACAAAAGCTAGACCGATACTTGAATTTCTTTTCCTCACTAGCG TTTTCGGCGACTCTTCTTGCGTCGTGGGAATCAGCTGGAGGCAGCTTGCAGGCCGGTCTCTTTAACGGAGGTCCT GCTGCCATTGTATATGGCATCATTATGAGCGGAGTGGGGAATCTGGCAATTGCCACTTCACTGGCTGAACTGGCG TCAGTGCACCCGACAGCTGGGGCGCAGTATCACTGGAGCTATGTTCTGGCGCCACGCTACCGGCGCTTCATTAGT TTCTTCCAAGGCTGGGTTACCTTCTTTTCTTGGGCTGCACTGGTCTGCATCTCGCCCTATTTTATCGGCACAGAG ATCGAAGGCATGGCTATCCTGGCCTATCCCGACTATGATGCAAAACGGTGGCAGGGAACCCTGCTCATGTGGGCA GTAGTCCTGATCCCGATCATCATCAACATCTTCGCCCGGCGCCTGCTCGCCATCATCGAAGTCGCAGCAGGCGTG ATGCATGTTGTCTTCCTCCCCGTGATGATAGCGACCTTTGTCATTCTAGCCCCGCGCAATTCTAATGCTTTCGTC TGGGATACTTTCGTGAGTGGTCTCAGTGGCTGGGAAAACCCAGGCGTCGTGTACTCCGTGGGACTGTTAGGTGTC ATCACCCCCCTGAGTGGAGTCGACGGCATCATCCACATGTCGGAGGAAGTCAAGAACGCCAAAGTCGTTATTCCC CGGTCCATGATCTACGGTACCATCATTAACTCTGTCATGGCATTTGGCTATCTCATCGCCGTCCTCTACTGCATG GGCGACTACACCGCTGCCCTCACCAGTCCAACGGGATACCCCATCATTACCATCGCCTACCAAGCCACCGGATCC AAAGCAGCCACATATGTGCTGATGGCCATGGGTATGCTTCCGGGTTGGATAGCACTGTTTAATGGCCTTGCGTCT GTCACTCGACTTACGTGGGCCTTTGCACGCGACAACGGGCTTCCGTTCTCTGATTTCTTTGTGAAGGTTGATCCA CGATTTAAAATTCCTATTCGGGCATTATTCCTCGTCACAACATTGGTTATCCTTCTCTCCTTTATTCAAATCGGG TCATCGGCCGCCTTCAACGCTATTCTCTCCCTGAGTACGTTGGGTTTGTATATTTCATACCTAATTCCATTGGTC CTTCTGGTGTGGAAAAGGTTTACCGCACCGAAGGATATTCCACAAGGCACATTCTCTCTGGGGAAGTGGGGATTA CCCATCAACCTGGTAGCGATTCTGTTCGCTACTTACTTCTCCATCTTCTTACCCTTTCCCTCTGAGGTGCCGGTG ACTGGGGAGACCATGAATTATGCCGGGCCGGTGTTGGGCTTCGTGATGCTGTTTGCTTGTGGAGATTGGCTGGTG CGAGGCCGCCATAAGTGGAATGGTCCGACTATGGCGTATTCACGGGAGTGA |
Transcript | >Ani_SJS100_1|g5789.t1 ATGCTCGACGAGGAGGTTGAGATGAAAAGCGGCAGCGCCGTCCAATCCACAGTTGCTGATGGACGCCCTCATGGT GCCGCAAGCAGCAGCATCGAATATCGTCAGCGACAAAAGCTAGACCGATACTTGAATTTCTTTTCCTCACTAGCG TTTTCGGCGACTCTTCTTGCGTCGTGGGAATCAGCTGGAGGCAGCTTGCAGGCCGGTCTCTTTAACGGAGGTCCT GCTGCCATTGTATATGGCATCATTATGAGCGGAGTGGGGAATCTGGCAATTGCCACTTCACTGGCTGAACTGGCG TCAGTGCACCCGACAGCTGGGGCGCAGTATCACTGGAGCTATGTTCTGGCGCCACGCTACCGGCGCTTCATTAGT TTCTTCCAAGGCTGGGTTACCTTCTTTTCTTGGGCTGCACTGGTCTGCATCTCGCCCTATTTTATCGGCACAGAG ATCGAAGGCATGGCTATCCTGGCCTATCCCGACTATGATGCAAAACGGTGGCAGGGAACCCTGCTCATGTGGGCA GTAGTCCTGATCCCGATCATCATCAACATCTTCGCCCGGCGCCTGCTCGCCATCATCGAAGTCGCAGCAGGCGTG ATGCATGTTGTCTTCCTCCCCGTGATGATAGCGACCTTTGTCATTCTAGCCCCGCGCAATTCTAATGCTTTCGTC TGGGATACTTTCGTGAGTGGTCTCAGTGGCTGGGAAAACCCAGGCGTCGTGTACTCCGTGGGACTGTTAGGTGTC ATCACCCCCCTGAGTGGAGTCGACGGCATCATCCACATGTCGGAGGAAGTCAAGAACGCCAAAGTCGTTATTCCC CGGTCCATGATCTACGGTACCATCATTAACTCTGTCATGGCATTTGGCTATCTCATCGCCGTCCTCTACTGCATG GGCGACTACACCGCTGCCCTCACCAGTCCAACGGGATACCCCATCATTACCATCGCCTACCAAGCCACCGGATCC AAAGCAGCCACATATGTGCTGATGGCCATGGGTATGCTTCCGGGTTGGATAGCACTGTTTAATGGCCTTGCGTCT GTCACTCGACTTACGTGGGCCTTTGCACGCGACAACGGGCTTCCGTTCTCTGATTTCTTTGTGAAGGTTGATCCA CGATTTAAAATTCCTATTCGGGCATTATTCCTCGTCACAACATTGGTTATCCTTCTCTCCTTTATTCAAATCGGG TCATCGGCCGCCTTCAACGCTATTCTCTCCCTGAGTACGTTGGGTTTGTATATTTCATACCTAATTCCATTGGTC CTTCTGGTGTGGAAAAGGTTTACCGCACCGAAGGATATTCCACAAGGCACATTCTCTCTGGGGAAGTGGGGATTA CCCATCAACCTGGTAGCGATTCTGTTCGCTACTTACTTCTCCATCTTCTTACCCTTTCCCTCTGAGGTGCCGGTG ACTGGGGAGACCATGAATTATGCCGGGCCGGTGTTGGGCTTCGTGATGCTGTTTGCTTGTGGAGATTGGCTGGTG CGAGGCCGCCATAAGTGGAATGGTCCGACTATGGCGTATTCACGGGAGTGA |
Gene | >Ani_SJS100_1|g5789.t1 ATGCTCGACGAGGAGGTTGAGATGAAAAGCGGCAGCGCCGTCCAATCCACAGTTGCTGATGGACGCCCTCATGGT GCCGCAAGCAGCAGCATCGAATATCGTCAGCGACAAAAGCTAGACGTACATGATCCTCGTCTAAATCACTGTCCG CTGTTCGCATGCTAACTTGGTTCTCGGCAGCGATACTTGAATTTCTTTTCCTCACTAGCGTTTTCGGCGACTCTT CTTGCGTCGTGGGAATCAGCTGGAGGCAGCTTGCAGGCCGGTCTCTTTAACGGAGGTCCTGCTGCCATTGTATAT GGCATCATTATGAGCGGAGTGGGGAATCTGGCAATTGCCACTTCACTGGCTGAACTGGCGTCAGTGTATGTAAGG CCCATTCACTATGACAATTCTTAGAAACTCACTGCTGATCAAACATCCATATTTGCCAGGCACCCGACAGCTGGG GCGCAGTATCACTGGAGCTATGTTCTGGCGCCACGCTACCGGCGCTTCATTAGTTTCTTCCAAGGTCAGACATAA CAATCACATTTGCACCGCGGGTAGATGTGTATGCTAACTAGCAACGGGTATATACAGGCTGGGTTACCGTACGAT GCTTCTCACCTTTATGTTTGCTACACTCGCTGAAAGATGACAGTTCTTTTCTTGGGCTGCACTGGTCTGCATCTC GCCCTATTTTATCGGCACAGAGATCGAAGGCATGGCTATCCTGGCCTATCCCGACTATGATGCAAAACGGTGGCA GGGAACCCTGCTCATGTGGGCAGTAGTCCTGATCCCGATCATCATCAACATCTTCGCCCGGCGCCTGCTCGCCAT CATCGAAGTCGCAGCAGGCGTGATGCATGTTGTCTTCCTCCCCGTGATGATAGCGACCTTTGTCATTCTAGCCCC GCGCAATTCTAATGCTTTCGTCTGGGATACTTTCGTGAGTGGTCTCAGTGGCTGGGAAAACCCAGGCGTCGTGTA CTCCGTGGGACTGTTAGGTGTCATCACCCCCCTGAGTGGTACTTATCCTTGGCCCTGACCATACTACCAACCAAC TAATCAATCTTCTCAGGAGTCGACGGCATCATCCACATGTCGGAGGAAGTCAAGAACGCCAAAGTCGTTATTCCC CGGTCCATGATCTACGGTACCATCATTAACTCTGTCATGGCATTTGGCTATCTCATCGCCGTCCTCTACTGCATG GGCGACTACACCGCTGCCCTCACCAGTCCAACGGGATACCCCATCATTACCATCGCCTACCAAGCCACCGGATCC AAAGCAGCCACATATGTGCTGATGGCCATGGGTATGCTTCCGGGTTGGATAGCACTGTTTAATGGCCTTGCGTCT GTCACTCGACTTACGTGGGCCTTTGCACGCGACAACGGGCTTCCGTTCTCTGATTTCTTTGTGAAGGTTGATCCA CGATTTAAAATTCCTATTCGGGCATTATTCCTCGTCACAACATTGGTTATCCTTCTCTCCTTTATTCAAATCGGG TCATCGGCCGCCTTCAACGCTATTCTCTCCCTGAGTACGTTGGGTTTGTATATTTCATACCTAATTCCATTGGTC CTTCTGGTGTGGAAAAGGTTTACCGCACCGAAGGATATTCCACAAGGCACATTCTCTCTGGGGAAGTGGGGATTA CCCATCAACCTGGTAGCGATTCTGTTCGCTACTTACTTCTCCATCTTCTTACCCTTTCCCTCTGAGGTGCCGGTG ACTGGGGAGACCATGAATTATGCCGGGCCGGTGTTGGGCTTCGTGATGCTGTTTGCTTGTGGAGATTGGCTGGTG CGAGGCCGCCATAAGTGGAATGGTCCGACTATGGCGTATTCACGGGAGTGA |