© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5754.t1 |
| Gene name | |
| Location | scaffold_033:143207..144820 |
| Strand | - |
| Gene length (bp) | 1613 |
| Transcript length (bp) | 1281 |
| Coding sequence length (bp) | 1281 |
| Protein length (aa) | 427 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05730 | CFEM | CFEM domain | 7.2E-06 | 27 | 74 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999771 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 26 | 19 |
| 2 | 100 | 122 | 22 |
| 3 | 135 | 157 | 22 |
| 4 | 177 | 198 | 21 |
| 5 | 205 | 227 | 22 |
| 6 | 257 | 279 | 22 |
| 7 | 292 | 314 | 22 |
| Orthofinder run ID | 3 |
| Orthogroup | 6036 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5754.t1 MKIHQCLITILAALTVSVFAASSNGTEFPECAVSCLHQESPNCTITDASCVCTGDASKSSLVTCALSNCSALDYY ITRHMYELECDQPIKKGPPLVDPSTLAPAILATIFFFIRIAAKLANLAGGWGLDDLTVTIAWILGVALFVVNTYM IKYGFGMNTWDILPFHHVTLVFQYFEGLAMMYKIQISLCKISVLLFLLRIFQSRVFRVCAYILIAINAAIGITFS LVDLLRCVPVHLDWHSWTGEYEGVGTCINFIAAVLVHCLVNIFVDVVIVLLPIYEVSKLQLPWMKKINVALMFMM GLILTIIAIIRVIVFWENRWTTNLTAGLQPLIHWSVIESQIAIMTTCLPAARAFINQYVPGLPGSTQRRTYGRTN SLYNNGGASSGVTNSKISKSVNISVDYTTRSERDSTSAVHLVDMDGRYERF* |
| Coding | >Ani_SJS100_1|g5754.t1 ATGAAGATACATCAGTGTTTAATCACCATATTGGCAGCGTTGACGGTATCTGTGTTCGCCGCGTCGTCAAATGGC ACAGAATTCCCAGAGTGTGCGGTGTCTTGTTTGCACCAAGAATCTCCAAATTGCACCATCACCGACGCATCATGT GTATGTACCGGCGATGCGAGCAAGTCGTCGCTAGTGACTTGCGCACTATCGAACTGCAGTGCACTGGATTACTAT ATCACGCGGCATATGTATGAACTGGAATGCGATCAGCCCATTAAGAAGGGGCCCCCTCTTGTCGATCCTTCGACT CTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGGATAGCTGCTAAACTCGCAAACCTCGCTGGTGGT TGGGGACTTGACGACCTCACTGTCACGATCGCATGGATACTGGGAGTTGCCTTGTTTGTTGTGAATACATACATG ATCAAATACGGTTTCGGCATGAATACCTGGGATATCTTACCCTTCCACCACGTCACATTAGTCTTCCAGTACTTC GAAGGTCTGGCGATGATGTACAAGATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAATC TTCCAGTCCCGTGTTTTCCGCGTATGCGCATATATACTCATCGCCATCAACGCCGCCATCGGCATCACGTTTTCC CTCGTGGATCTGCTTCGCTGCGTGCCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGGA ACATGCATCAATTTCATCGCAGCAGTTTTAGTCCACTGTCTTGTCAACATTTTCGTCGACGTCGTCATCGTCCTC CTACCGATCTACGAAGTCAGCAAGTTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTTCATGATG GGTCTTATTTTAACTATTATCGCTATCATTCGTGTGATCGTATTCTGGGAGAACCGCTGGACCACCAACTTGACC GCCGGTCTCCAGCCCCTCATTCACTGGTCCGTCATCGAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGCC GCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACACAACGACGGACCTACGGCCGAACCAAC TCTCTGTACAACAACGGAGGTGCATCCTCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGTT GACTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGGTGGACATGGACGGGAGGTATGAACGG TTTTAA |
| Transcript | >Ani_SJS100_1|g5754.t1 ATGAAGATACATCAGTGTTTAATCACCATATTGGCAGCGTTGACGGTATCTGTGTTCGCCGCGTCGTCAAATGGC ACAGAATTCCCAGAGTGTGCGGTGTCTTGTTTGCACCAAGAATCTCCAAATTGCACCATCACCGACGCATCATGT GTATGTACCGGCGATGCGAGCAAGTCGTCGCTAGTGACTTGCGCACTATCGAACTGCAGTGCACTGGATTACTAT ATCACGCGGCATATGTATGAACTGGAATGCGATCAGCCCATTAAGAAGGGGCCCCCTCTTGTCGATCCTTCGACT CTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGGATAGCTGCTAAACTCGCAAACCTCGCTGGTGGT TGGGGACTTGACGACCTCACTGTCACGATCGCATGGATACTGGGAGTTGCCTTGTTTGTTGTGAATACATACATG ATCAAATACGGTTTCGGCATGAATACCTGGGATATCTTACCCTTCCACCACGTCACATTAGTCTTCCAGTACTTC GAAGGTCTGGCGATGATGTACAAGATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAATC TTCCAGTCCCGTGTTTTCCGCGTATGCGCATATATACTCATCGCCATCAACGCCGCCATCGGCATCACGTTTTCC CTCGTGGATCTGCTTCGCTGCGTGCCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGGA ACATGCATCAATTTCATCGCAGCAGTTTTAGTCCACTGTCTTGTCAACATTTTCGTCGACGTCGTCATCGTCCTC CTACCGATCTACGAAGTCAGCAAGTTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTTCATGATG GGTCTTATTTTAACTATTATCGCTATCATTCGTGTGATCGTATTCTGGGAGAACCGCTGGACCACCAACTTGACC GCCGGTCTCCAGCCCCTCATTCACTGGTCCGTCATCGAATCCCAGATCGCAATCATGACGACCTGTCTCCCCGCC GCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCAGCACACAACGACGGACCTACGGCCGAACCAAC TCTCTGTACAACAACGGAGGTGCATCCTCAGGGGTCACCAACAGCAAGATTTCCAAGTCAGTGAATATCTCCGTT GACTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGCATTTGGTGGACATGGACGGGAGGTATGAACGG TTTTAA |
| Gene | >Ani_SJS100_1|g5754.t1 ATGAAGATACATCAGTGTTTAATCACCATATTGGCAGCGTTGACGGTATCTGTGTTCGCCGCGTCGTCAAATGGC ACAGAATTCCCAGAGTGTGCGGTAAGTGGGATTCCCACCCGGGGGTTCCGCTTTCATCATTGACCATGTCCCCAG GTGTCTTGTTTGCACCAAGAATCTCCAAATTGCACCATCACCGACGCATCATGTGTATGTACCGGCGATGCGAGC AAGTCGTCGCTAGTGACTTGCGCACTATCGAACTGCAGTGCACTGGATTACTATAGTGAGCATCCATTTCCGCTG GCACTGACGGTTTAATATACCTAACACCCCGCAGTCACGCGGCATATGTATGAACTGGAATGCGATCAGCCCATT AAGAAGGGGCCCCCTCTTGTCGATCCTTCGACTCTTGCACCAGCTATCCTCGCCACGATATTCTTCTTTATCCGG ATAGCTGCTAAACTCGCAAACCTCGCTGGTGGTTGGGGACTTGACGACCTCACTGTCACGATCGCATGGGTAAGT GCTGCTGCATTGCCTGAGACCAGTGGAGCCTCTAACAGCTAGTAGATACTGGGAGTTGCCTTGTTTGTTGTGAAT ACATACAGTAAGTCATTATCATCCTTCATTTCGTGGCATCATGACTGACAAAATAGTGATCAAATACGGTTTCGG CATGAATACCTGGGATATCTTACCCTTCCACCACGTCACATTAGTCTTCCAGTACTTCGAAGGTCTGGCGATGAT GTACAAGATCCAAATCTCGCTCTGCAAGATATCCGTCCTACTCTTCCTGCTGCGAATCTTCCAGTCCCGTGTTTT CCGCGTATGCGCATATATACTCATCGCCATCAACGCCGCCATCGGCATCACGTTTTCCCTCGTGGATCTGCTTCG CTGCGTGCCAGTCCACCTGGACTGGCATTCCTGGACCGGCGAATACGAGGGCGTGGGAACATGCATCAATTTCAT CGCAGCAGTTTTAGTCCACTGTCTTGTCAACATTTTCGTCGACGTCGTCATCGTCCTCCTACCGATCTACGAAGT CAGCAAGTTGCAGCTGCCATGGATGAAGAAGATCAACGTGGCACTGATGTTCATGATGGGTCTTATGTAAGGCTC ACCTACTCATTCACCCCCTTCAAGCTTTGCTAACAAAGATCTTCTCAGTTTAACTATTATCGCTATCATTCGTGT GATCGTATTCTGGGAGAACCGCTGGACCACCAACTTGACCGGTACCACCTCACCCACCCTCACAACCTTTTCAAA GTCCACCCCACTAACACATAAATGTATTTACAGCCGGTCTCCAGCCCCTCATTCACTGGTCCGTCATCGAATCCC AGATCGCAATCATGACGACCTGTCTCCCCGCCGCCCGCGCGTTCATAAACCAATACGTCCCAGGTCTTCCCGGCA GCACACAACGACGGACCTACGGCCGAACCAACTCTCTGTACAACAACGGAGGTGCATCCTCAGGGGTCACCAACA GCAAGATTTCCAAGTCAGTGAATATCTCCGTTGACTATACGACACGGTCGGAGAGGGATTCGACCAGCGCTGTGC ATTTGGTGGACATGGACGGGAGGTATGAACGGTTTTAA |