Protein ID | Ani_SJS100_1|g575.t1 |
Gene name | |
Location | scaffold_002:373040..374625 |
Strand | - |
Gene length (bp) | 1585 |
Transcript length (bp) | 1311 |
Coding sequence length (bp) | 1311 |
Protein length (aa) | 437 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12265 | CAF1C_H4-bd | Histone-binding protein RBBP4 or subunit C of CAF1 complex | 1.9E-27 | 27 | 97 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.2E-03 | 181 | 218 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.5E-02 | 285 | 315 |
PF00400 | WD40 | WD domain, G-beta repeat | 1.8E-05 | 322 | 359 |
PF00400 | WD40 | WD domain, G-beta repeat | 6.1E-02 | 383 | 416 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 55 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g575.t1 MEPYDDGFIEEQEEQEEERTEEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDVPDKPYSTHRLL IGTHTSSDAQNYLQIAHVQLPNPTAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQN PNIIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTREGFGLSWSPHTTGHLATGSEDKTVRLWDLTTYTKG NKALKPVRTYTHHSSIVNDVQYHPLHSSLIGTVSDDITLQILDVREAETTRAAASAEGQHRDAINAVAFNPAAET VLATGSADKSIGLWDLRNLKTKLHALECHNDSVTSLSWHPFEESVLASASYDRKIMFWDLSRTGEEQTPEDAQDG PPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDLEDVPTEELEP* |
Coding | >Ani_SJS100_1|g575.t1 ATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATC AACGAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGG CCTACTCTCACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTT ATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCG CCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATG GAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAAC CCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAAGCTTACCT ACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACAC ACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACACAAAGGGT AACAAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTG CATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACG CGTGCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACG GTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCG CTTGAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGC TATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGT CCACCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCG TGGGTGCTCTGCTCGGCGGCCGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGAT CTGGAGGATGTGCCGACCGAGGAGTTGGAACCATGA |
Transcript | >Ani_SJS100_1|g575.t1 ATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATC AACGAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGG CCTACTCTCACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTT ATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCG CCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATG GAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAAC CCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAAGCTTACCT ACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACAC ACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACACAAAGGGT AACAAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTG CATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACG CGTGCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACG GTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCG CTTGAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGC TATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGT CCACCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCG TGGGTGCTCTGCTCGGCGGCCGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGAT CTGGAGGATGTGCCGACCGAGGAGTTGGAACCATGA |
Gene | >Ani_SJS100_1|g575.t1 ATGGAGCCTTACGACGATGGTGAGAGGTCACCCTCCGGATTCTGTCGCGCGAGCTTCACTAACCGTTCCTCCCGC CAGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATCAACGAAGGTGCGCTGT CCAATCTTCAGTGGGGTGTCTCCCGACCCAACTAATGAGTGGAACAGAGTACAAGACATGGAAGAAGAACGCACC TTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGGCCTACTCTCACAACACAATGGCTACCTGATAAGCA AGAGTATGCGCGCCCATTGTGTTCGTTTCCTTATAGATTCTAACGTTCTGTAGTGTTCCCGATAAGCCCTACTCG ACTCATCGCCTGCTTATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTC CCTAATCCGACTGCGCCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCG AAGAAGGCGCCTATGGAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGA TACCAACCACAGAACCCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAG CACCCAAGCTTACCTACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTC AGCTGGAGTCCACACACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGTAAGATCTG ACTAAAGAAGTGAAACACGATTGCTCTGGAGCTAACGGCTGTTCAGGGATCTGACGACGTACACAAAGGGTAACA AGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTGCATT CTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACGCGTG CGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACGGTCC TGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCGCTTG AATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGCTATG ACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGTCCAC CCGAGCTGTACGTAACGCTTCCCGTATTGTACCATGTTACACTGCTGACACTGTTTCTAGTTTGTTCATGCACGG CGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCGTGGGTGCTCTGCTCGGCGGCCGAAGA CAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGAGGAGTT GGAACCATGA |