Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g575.t1
Gene name
Locationscaffold_002:373040..374625
Strand-
Gene length (bp)1585
Transcript length (bp)1311
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12265 CAF1C_H4-bd Histone-binding protein RBBP4 or subunit C of CAF1 complex 1.9E-27 27 97
PF00400 WD40 WD domain, G-beta repeat 1.2E-03 181 218
PF00400 WD40 WD domain, G-beta repeat 1.5E-02 285 315
PF00400 WD40 WD domain, G-beta repeat 1.8E-05 322 359
PF00400 WD40 WD domain, G-beta repeat 6.1E-02 383 416

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g575.t1
MEPYDDGFIEEQEEQEEERTEEKIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDVPDKPYSTHRLL
IGTHTSSDAQNYLQIAHVQLPNPTAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQN
PNIIATMCTDGRVMIWDRSKHPSLPTGTVNPQMELLGHTREGFGLSWSPHTTGHLATGSEDKTVRLWDLTTYTKG
NKALKPVRTYTHHSSIVNDVQYHPLHSSLIGTVSDDITLQILDVREAETTRAAASAEGQHRDAINAVAFNPAAET
VLATGSADKSIGLWDLRNLKTKLHALECHNDSVTSLSWHPFEESVLASASYDRKIMFWDLSRTGEEQTPEDAQDG
PPELLFMHGGHTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDLEDVPTEELEP*
Coding >Ani_SJS100_1|g575.t1
ATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATC
AACGAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGG
CCTACTCTCACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTT
ATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCG
CCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATG
GAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAAC
CCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAAGCTTACCT
ACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACAC
ACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACACAAAGGGT
AACAAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTG
CATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACG
CGTGCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACG
GTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCG
CTTGAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGC
TATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGT
CCACCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCG
TGGGTGCTCTGCTCGGCGGCCGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGAT
CTGGAGGATGTGCCGACCGAGGAGTTGGAACCATGA
Transcript >Ani_SJS100_1|g575.t1
ATGGAGCCTTACGACGATGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATC
AACGAAGAGTACAAGACATGGAAGAAGAACGCACCTTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGG
CCTACTCTCACAACACAATGGCTACCTGATAAGCAAGATGTTCCCGATAAGCCCTACTCGACTCATCGCCTGCTT
ATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTCCCTAATCCGACTGCG
CCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCGAAGAAGGCGCCTATG
GAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGATACCAACCACAGAAC
CCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAGCACCCAAGCTTACCT
ACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTCAGCTGGAGTCCACAC
ACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGGATCTGACGACGTACACAAAGGGT
AACAAGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTG
CATTCTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACG
CGTGCGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACG
GTCCTGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCG
CTTGAATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGC
TATGACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGT
CCACCCGAGCTTTTGTTCATGCACGGCGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCG
TGGGTGCTCTGCTCGGCGGCCGAAGACAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGAT
CTGGAGGATGTGCCGACCGAGGAGTTGGAACCATGA
Gene >Ani_SJS100_1|g575.t1
ATGGAGCCTTACGACGATGGTGAGAGGTCACCCTCCGGATTCTGTCGCGCGAGCTTCACTAACCGTTCCTCCCGC
CAGGTTTCATTGAGGAGCAAGAAGAGCAGGAGGAAGAGCGCACCGAGGAGAAGATCATCAACGAAGGTGCGCTGT
CCAATCTTCAGTGGGGTGTCTCCCGACCCAACTAATGAGTGGAACAGAGTACAAGACATGGAAGAAGAACGCACC
TTTCCTTTATGACATGATCCTGAGCACGGCATTAGAATGGCCTACTCTCACAACACAATGGCTACCTGATAAGCA
AGAGTATGCGCGCCCATTGTGTTCGTTTCCTTATAGATTCTAACGTTCTGTAGTGTTCCCGATAAGCCCTACTCG
ACTCATCGCCTGCTTATTGGCACTCATACCTCGAGTGATGCGCAAAACTACCTGCAGATCGCTCATGTACAGCTC
CCTAATCCGACTGCGCCTAACCCAGATGACTACGATGAAGAGCGCGGGGAGATCGGCGGATACGGCGGCAGCTCG
AAGAAGGCGCCTATGGAAATCAAGTTCAACATTGTGCAAAAGATTGATCACAAGGGTGAAGTCAACAAGGCGCGA
TACCAACCACAGAACCCCAACATCATTGCCACCATGTGCACAGATGGCCGTGTAATGATCTGGGATCGCTCAAAG
CACCCAAGCTTACCTACAGGCACTGTCAACCCTCAGATGGAGCTTTTAGGCCATACTCGCGAGGGTTTCGGTCTC
AGCTGGAGTCCACACACCACCGGTCACCTTGCTACAGGTAGCGAGGACAAGACAGTCCGTCTTTGGTAAGATCTG
ACTAAAGAAGTGAAACACGATTGCTCTGGAGCTAACGGCTGTTCAGGGATCTGACGACGTACACAAAGGGTAACA
AGGCACTCAAGCCTGTTCGGACATACACCCATCATTCCTCTATTGTCAACGATGTTCAATACCATCCTCTGCATT
CTTCACTCATCGGAACGGTATCTGATGATATTACCCTCCAAATTCTCGATGTGCGTGAGGCCGAAACCACGCGTG
CGGCTGCATCAGCGGAGGGCCAGCACCGTGACGCCATCAACGCCGTTGCGTTCAACCCTGCCGCAGAAACGGTCC
TGGCCACCGGATCGGCCGATAAGTCGATCGGCCTGTGGGATCTACGTAATCTGAAGACCAAACTGCACGCGCTTG
AATGTCACAACGACTCCGTGACTTCGCTCTCTTGGCATCCATTTGAGGAGAGCGTACTGGCCAGTGCCAGCTATG
ACCGCAAGATCATGTTCTGGGATCTTAGCCGGACTGGGGAGGAGCAGACCCCTGAGGATGCCCAGGATGGTCCAC
CCGAGCTGTACGTAACGCTTCCCGTATTGTACCATGTTACACTGCTGACACTGTTTCTAGTTTGTTCATGCACGG
CGGCCACACGAACCGCATTTCGGATTTCAGCTGGAACCTGAATGATCCGTGGGTGCTCTGCTCGGCGGCCGAAGA
CAACCTGCTGCAGGTGTGGAAGGTGGCAGATGCGATTGTCGGCAAGGATCTGGAGGATGTGCCGACCGAGGAGTT
GGAACCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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