© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5746.t1 |
| Gene name | |
| Location | scaffold_033:120197..121022 |
| Strand | + |
| Gene length (bp) | 825 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06912 | DUF1275 | Protein of unknown function (DUF1275) | 6.4E-44 | 51 | 261 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 37 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 50 | 72 | 22 |
| 2 | 100 | 122 | 22 |
| 3 | 129 | 151 | 22 |
| 4 | 222 | 239 | 17 |
| 5 | 244 | 266 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5746.t1 MAHETAHYQEFPAHENDPLLGHRGPSSKPSPLSQLRRHLRTEVDPHRADLLLIFCYVITGLLDSSAVFIWGSFVS MQTGNTVYFGLGLAGLDETQRWLKSLISIGSFCIGSFFFAVLHRLFHTPRQRSALTLSFALQMICVAVAASIVTV QQTGKSDPLTWKIGVPLALVAFQSSGQAVSSRVLKCSSLTSVVLTSIYCDLFSSPGLTSVSVLKAPDEWRRLGAV VGMLIGIVAGGWWARSEVGLPGALWTAVVFKGLICVAWMLWKTKDVDDE* |
| Coding | >Ani_SJS100_1|g5746.t1 ATGGCGCACGAAACCGCGCACTATCAGGAATTCCCCGCCCATGAAAACGACCCTCTTCTGGGGCATCGGGGACCT AGCTCCAAACCTTCTCCCCTGAGCCAACTGCGCCGCCATCTCCGCACCGAAGTCGACCCGCACCGAGCAGACCTT CTCCTCATTTTCTGCTACGTCATCACGGGTCTCCTGGATAGTTCTGCCGTTTTCATCTGGGGCTCCTTTGTGAGC ATGCAGACCGGCAACACGGTATACTTTGGACTCGGACTGGCCGGGCTGGACGAGACTCAACGGTGGCTTAAATCG CTCATCTCGATCGGCAGTTTCTGCATCGGCTCCTTTTTCTTCGCCGTGTTACACCGCCTGTTCCACACGCCGCGG CAACGGTCCGCACTGACTCTGTCTTTTGCACTGCAGATGATTTGTGTCGCTGTCGCTGCGAGTATTGTCACGGTG CAGCAGACGGGCAAGAGCGATCCTCTGACGTGGAAAATTGGCGTGCCGTTGGCATTGGTCGCGTTTCAGAGTAGT GGTCAGGCCGTCTCGAGTCGTGTGCTGAAGTGCAGTAGTTTGACTAGTGTTGTACTTACGAGCATTTATTGTGAT TTGTTCTCATCGCCGGGACTGACCTCGGTCAGTGTGCTCAAGGCTCCTGATGAGTGGAGGCGGTTGGGGGCTGTG GTGGGGATGTTGATTGGAATTGTGGCGGGGGGCTGGTGGGCGAGGAGTGAGGTTGGATTGCCGGGCGCACTTTGG ACTGCCGTGGTGTTCAAGGGGTTAATTTGTGTTGCATGGATGTTATGGAAGACGAAGGATGTTGATGATGAGTAG |
| Transcript | >Ani_SJS100_1|g5746.t1 ATGGCGCACGAAACCGCGCACTATCAGGAATTCCCCGCCCATGAAAACGACCCTCTTCTGGGGCATCGGGGACCT AGCTCCAAACCTTCTCCCCTGAGCCAACTGCGCCGCCATCTCCGCACCGAAGTCGACCCGCACCGAGCAGACCTT CTCCTCATTTTCTGCTACGTCATCACGGGTCTCCTGGATAGTTCTGCCGTTTTCATCTGGGGCTCCTTTGTGAGC ATGCAGACCGGCAACACGGTATACTTTGGACTCGGACTGGCCGGGCTGGACGAGACTCAACGGTGGCTTAAATCG CTCATCTCGATCGGCAGTTTCTGCATCGGCTCCTTTTTCTTCGCCGTGTTACACCGCCTGTTCCACACGCCGCGG CAACGGTCCGCACTGACTCTGTCTTTTGCACTGCAGATGATTTGTGTCGCTGTCGCTGCGAGTATTGTCACGGTG CAGCAGACGGGCAAGAGCGATCCTCTGACGTGGAAAATTGGCGTGCCGTTGGCATTGGTCGCGTTTCAGAGTAGT GGTCAGGCCGTCTCGAGTCGTGTGCTGAAGTGCAGTAGTTTGACTAGTGTTGTACTTACGAGCATTTATTGTGAT TTGTTCTCATCGCCGGGACTGACCTCGGTCAGTGTGCTCAAGGCTCCTGATGAGTGGAGGCGGTTGGGGGCTGTG GTGGGGATGTTGATTGGAATTGTGGCGGGGGGCTGGTGGGCGAGGAGTGAGGTTGGATTGCCGGGCGCACTTTGG ACTGCCGTGGTGTTCAAGGGGTTAATTTGTGTTGCATGGATGTTATGGAAGACGAAGGATGTTGATGATGAGTAG |
| Gene | >Ani_SJS100_1|g5746.t1 ATGGCGCACGAAACCGCGCACTATCAGGAATTCCCCGCCCATGAAAACGACCCTCTTCTGGGGCATCGGGGACCT AGCTCCAAACCTTCTCCCCTGAGCCAACTGCGCCGCCATCTCCGCACCGAAGTCGACCCGCACCGAGCAGACCTT CTCCTCATTTTCTGCTACGTCATCACGGGTCTCCTGGATAGTTCTGCCGTTTTCATCTGGGGCTCCTTTGTGAGC ATGCAGACCGGCAACACGGTATACTTTGGACTCGGACTGGCCGGGCTGGACGAGACTCAACGGTGGCTTAAATCG CTCATCTCGATCGGCAGTTTCTGCATCGGCTCCTTTTTCTTCGCCGTGTTACACCGCCTGTTCCACACGCCGCGG CAACGGTCCGCACTGACTCTGTCTTTTGCACTGCAGATGATTTGTGTCGCTGTCGCTGCGAGTATTGTCACGGTG CAGCAGACGGGCAAGAGCGATCCTCTGACGTGGAAAATTGGCGTGCCGTTGGCATTGGTCGCGTTTCAGAGTAGT GGTCAGGCCGTCTCGAGTCGTGTGCTGAAGTGCAGTAGTTTGACTAGTGTTGTACTTACGAGCATTTATTGTGAT TTGTTCTCATCGCCGGGACTGACCTCGGTCAGTGTGCTCAAGGCTCCTGATGAGTGGAGGCGGTTGGGGGCTGTG GTGGGGATGTTGATTGGAATTGTGGCGGGGGGCTGGTGGGCGAGGAGTGAGGTTGGATTGCCGGGCGCACTTTGG ACTGCCGTGGTGTTCAAGGGGTTAATTTGTGTTGCATGGATGTTATGGAAGACGAAGGATGTTGATGATGAGTAG |