Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g572.t1
Gene name
Locationscaffold_002:365581..366177
Strand+
Gene length (bp)596
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12296 HsbA Hydrophobic surface binding protein A 1.7E-21 28 145

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g572.t1
MLFRNIAFYLTAGACLAVSPVLGASDINQAVSDMNALTTAIQNARQSLDNYQGGTVSSLKVKTSVQAAKSAAQKA
RQNLAQQDEPFNDDEAEQYYQAYQAMCPELVDTVKVAQDKAPLFKNAGLASPARATIDSLRDEQDQFGEEAQKHV
PADVYARAVPCSDQIRQAFDDNDNALS*
Coding >Ani_SJS100_1|g572.t1
ATGCTCTTCCGCAACATTGCCTTCTACCTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCGTTCTGGGCGCCAGC
GACATCAATCAAGCTGTCTCGGACATGAACGCCCTTACCACTGCCATTCAAAATGCCCGCCAATCCCTAGACAAC
TACCAGGGAGGGACGGTCTCAAGCCTCAAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCGCCGCTCAGAAAGCT
CGCCAGAACCTGGCTCAGCAAGACGAGCCCTTCAATGACGACGAGGCCGAGCAATATTACCAGGCCTACCAGGCA
ATGTGCCCAGAACTCGTGGACACAGTGAAGGTAGCACAGGACAAGGCGCCTCTATTCAAAAACGCTGGATTGGCG
TCACCCGCGAGGGCGACCATTGATTCACTCCGGGATGAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGCACGTC
CCTGCGGACGTCTATGCCAGGGCAGTTCCTTGTTCGGATCAAATCAGGCAGGCGTTTGATGACAATGACAATGCT
CTGTCTTGA
Transcript >Ani_SJS100_1|g572.t1
ATGCTCTTCCGCAACATTGCCTTCTACCTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCGTTCTGGGCGCCAGC
GACATCAATCAAGCTGTCTCGGACATGAACGCCCTTACCACTGCCATTCAAAATGCCCGCCAATCCCTAGACAAC
TACCAGGGAGGGACGGTCTCAAGCCTCAAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCGCCGCTCAGAAAGCT
CGCCAGAACCTGGCTCAGCAAGACGAGCCCTTCAATGACGACGAGGCCGAGCAATATTACCAGGCCTACCAGGCA
ATGTGCCCAGAACTCGTGGACACAGTGAAGGTAGCACAGGACAAGGCGCCTCTATTCAAAAACGCTGGATTGGCG
TCACCCGCGAGGGCGACCATTGATTCACTCCGGGATGAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGCACGTC
CCTGCGGACGTCTATGCCAGGGCAGTTCCTTGTTCGGATCAAATCAGGCAGGCGTTTGATGACAATGACAATGCT
CTGTCTTGA
Gene >Ani_SJS100_1|g572.t1
ATGCTCTTCCGCAACATTGCCTTCTACCTCACTGCTGGCGCCTGTCTCGCAGTATCCCCCGTTCTGGGCGCCAGC
GACATCAATCAAGCTGTCTCGGACATGAACGCCCTTACCACTGCCATTCAAAATGCCCGCCAATCCCTAGACAAC
TACCAGGGAGGGACGGTCTCAAGCCTCAAGGTTAAGACTTCTGTGCAGGCAGCCAAAAGCGCCGCTCAGAAAGCT
CGCCAGAACCTGGCTCAGCAAGACGAGCCCTTCAATGACGACGAGGCCGAGCAATATTACCAGGCCTACCAGGCA
ATGTGCCCAGAACTCGTGGACACAGTGAAGGTAGCACAGGACAAGGTATTACGCCCTGGGCGGTTCCAGCTTCAC
TGATTCGATATGCTGATATCTTTCTTGTGCAGGCGCCTCTATTCAAAAACGCTGGATTGGCGTCACCCGCGAGGG
CGACCATTGATTCACTCCGGGATGAGCAGGACCAGTTCGGGGAGGAAGCCCAGAAGCACGTCCCTGCGGACGTCT
ATGCCAGGGCAGTTCCTTGTTCGGATCAAATCAGGCAGGCGTTTGATGACAATGACAATGCTCTGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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