© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ani_SJS100_1|g5713.t1 |
| Gene name | |
| Location | scaffold_033:33492..35344 |
| Strand | - |
| Gene length (bp) | 1852 |
| Transcript length (bp) | 1542 |
| Coding sequence length (bp) | 1542 |
| Protein length (aa) | 514 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.2E-100 | 15 | 470 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 4.6E-20 | 16 | 355 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 23 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 49 | 71 | 22 |
| 3 | 78 | 100 | 22 |
| 4 | 104 | 126 | 22 |
| 5 | 147 | 169 | 22 |
| 6 | 173 | 190 | 17 |
| 7 | 270 | 289 | 19 |
| 8 | 299 | 316 | 17 |
| 9 | 323 | 345 | 22 |
| 10 | 371 | 393 | 22 |
| 11 | 406 | 428 | 22 |
| 12 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5713.t1 MYRISNIYVLAGFGTIGGALFGFDVSSMSAWIGTDQYLEYFNHPDSDLQGGITASMSAGSFAGALAAGFISDRIG RRYSLMLACCIWVIGAAIQCSAQNVAHLVAGRVISGLSVGITSSQVCVYLAELAPARIRGRIVGIQQWAIEWGML IMYLISYGCGQGLAGAASFRVSWGVQGIPALILLAALPFFPESPRWLASKERWEEALDTLALLHAKGDRNDPVVQ VEYEEVQEAARIAQEAKDISFFSLFGPKIWKRTLCGVSAQVWQQLLGGNVAMYYVVYIFNMAGMSGNTTLYSSAI QYVIFLVTTGTILPFVDRIGRRLLLLTGSVLCMACHFAIAGLMASRGHHVDSVDGNANLKWSITGPPGKGVIACS YIFVAVYGFTWAPVAWIYASEVFPLKYRAKGVGLSAAGNWIFNFALAYFVAPAFTNIQWKTYIIFGVFCTVMTFH VFFFYPETARRSLEDIDLMFETDMKPWKTHQIHDRFGEEVERHKHKDMADQEKGVVSTHDEMA* |
| Coding | >Ani_SJS100_1|g5713.t1 ATGTATCGCATTTCGAATATCTACGTCCTGGCTGGCTTCGGCACCATTGGCGGTGCCTTGTTCGGCTTCGATGTC AGCTCCATGAGTGCCTGGATTGGCACGGATCAGTATCTGGAATACTTCAACCACCCAGATTCCGACTTGCAAGGT GGTATTACCGCTTCCATGTCTGCTGGCTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGT CGTCGTTACTCCCTTATGCTAGCGTGTTGCATCTGGGTCATCGGCGCTGCGATTCAATGTAGCGCCCAAAATGTC GCCCACCTGGTCGCCGGGAGAGTTATCAGCGGCCTGTCCGTCGGTATTACATCCTCACAGGTCTGCGTTTATCTC GCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATCGTCGGCATTCAGCAATGGGCCATCGAATGGGGTATGCTC ATCATGTATCTGATCTCGTACGGATGCGGCCAAGGTCTGGCTGGAGCAGCTTCTTTCCGAGTATCATGGGGTGTT CAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTACCCTTCTTCCCCGAATCTCCTCGTTGGCTGGCAAGTAAA GAGCGCTGGGAGGAGGCTTTGGATACTTTAGCGCTGCTGCATGCCAAGGGCGACCGCAACGATCCCGTGGTCCAA GTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATTGCCCAGGAGGCCAAGGACATTTCTTTCTTTTCACTGTTC GGACCAAAGATTTGGAAGCGAACCCTTTGCGGTGTCAGCGCCCAGGTCTGGCAGCAGTTGCTCGGAGGCAATGTT GCGATGTACTACGTCGTGTACATCTTCAACATGGCTGGCATGTCTGGAAACACCACCCTGTACTCGTCAGCCATC CAGTACGTCATCTTCTTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATCGGTCGACGGCTTTTGCTC CTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTTGCTATTGCTGGTCTTATGGCTTCACGTGGTCATCATGTT GACTCGGTCGATGGCAATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAAGGTGTCATCGCCTGCTCG TACATCTTCGTTGCCGTTTATGGTTTCACCTGGGCCCCAGTAGCATGGATCTATGCTTCTGAAGTCTTCCCCCTT AAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTGCGGGTAACTGGATTTTCAACTTCGCGTTGGCGTACTTTGTG GCTCCTGCTTTCACCAACATTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCACTGTGATGACGTTCCAT GTGTTCTTTTTCTACCCGGAGACTGCTCGACGATCGCTTGAAGACATTGACTTGATGTTTGAGACGGACATGAAG CCCTGGAAGACGCACCAGATTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCACAAGGACATGGCTGAC CAAGAAAAGGGAGTTGTGTCGACCCATGACGAAATGGCGTGA |
| Transcript | >Ani_SJS100_1|g5713.t1 ATGTATCGCATTTCGAATATCTACGTCCTGGCTGGCTTCGGCACCATTGGCGGTGCCTTGTTCGGCTTCGATGTC AGCTCCATGAGTGCCTGGATTGGCACGGATCAGTATCTGGAATACTTCAACCACCCAGATTCCGACTTGCAAGGT GGTATTACCGCTTCCATGTCTGCTGGCTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGT CGTCGTTACTCCCTTATGCTAGCGTGTTGCATCTGGGTCATCGGCGCTGCGATTCAATGTAGCGCCCAAAATGTC GCCCACCTGGTCGCCGGGAGAGTTATCAGCGGCCTGTCCGTCGGTATTACATCCTCACAGGTCTGCGTTTATCTC GCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATCGTCGGCATTCAGCAATGGGCCATCGAATGGGGTATGCTC ATCATGTATCTGATCTCGTACGGATGCGGCCAAGGTCTGGCTGGAGCAGCTTCTTTCCGAGTATCATGGGGTGTT CAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTACCCTTCTTCCCCGAATCTCCTCGTTGGCTGGCAAGTAAA GAGCGCTGGGAGGAGGCTTTGGATACTTTAGCGCTGCTGCATGCCAAGGGCGACCGCAACGATCCCGTGGTCCAA GTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATTGCCCAGGAGGCCAAGGACATTTCTTTCTTTTCACTGTTC GGACCAAAGATTTGGAAGCGAACCCTTTGCGGTGTCAGCGCCCAGGTCTGGCAGCAGTTGCTCGGAGGCAATGTT GCGATGTACTACGTCGTGTACATCTTCAACATGGCTGGCATGTCTGGAAACACCACCCTGTACTCGTCAGCCATC CAGTACGTCATCTTCTTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATCGGTCGACGGCTTTTGCTC CTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTTGCTATTGCTGGTCTTATGGCTTCACGTGGTCATCATGTT GACTCGGTCGATGGCAATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAAGGTGTCATCGCCTGCTCG TACATCTTCGTTGCCGTTTATGGTTTCACCTGGGCCCCAGTAGCATGGATCTATGCTTCTGAAGTCTTCCCCCTT AAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTGCGGGTAACTGGATTTTCAACTTCGCGTTGGCGTACTTTGTG GCTCCTGCTTTCACCAACATTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCACTGTGATGACGTTCCAT GTGTTCTTTTTCTACCCGGAGACTGCTCGACGATCGCTTGAAGACATTGACTTGATGTTTGAGACGGACATGAAG CCCTGGAAGACGCACCAGATTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCACAAGGACATGGCTGAC CAAGAAAAGGGAGTTGTGTCGACCCATGACGAAATGGCGTGA |
| Gene | >Ani_SJS100_1|g5713.t1 ATGTATCGCATTTCGAATATCTACGGTATGGCTTAAGTATCTGACGGCGGCCGCGTTGCTAAAGCTAACGGAGTC ACAGTCCTGGCTGGCTTCGGCACCATTGGCGGTGCCTTGTTCGGCTTCGATGTCAGCTCCATGAGTGCCTGGATT GGCACGGATCAGTATCTGGAATACTTCAACCACCCAGATTCCGACTTGCAAGGTGGTGTAAGTAACCAAGCCACT TCCCCAGAGCAGCAGTATGGATACGAAGTACTGATGGTAGGATGGGGCACTCCTAGATTACCGCTTCCATGTCTG CTGGCTCCTTTGCCGGTGCACTCGCTGCCGGCTTCATATCAGACCGAATTGGTCGTCGTTACTCCCTTATGCTAG CGTGTTGCATCTGGGTCATCGGCGCTGCGATTCAATGTAGCGCCCAAAATGTCGCCCACCTGGTCGCCGGGAGAG TTATCAGCGGCCTGTCCGGTATGAATCCTCAGCTGTATATCTGGAGTCCTGCACGTGCTAAACAACTCTTCTAGT CGGTATTACATCCTCACAGGTCTGCGTTTATCTCGCTGAACTAGCTCCGGCTCGGATTCGTGGTCGTATCGTCGG CATTCAGCAATGGGCCATCGAATGGGGTATGCTCATCATGTATCTGATCTCGTACGGATGCGGCCAAGGTCTGGC TGGAGCAGCTTCTTTCCGAGTATCATGGGGTGTTCAGGGTATCCCGGCCCTCATCCTACTTGCCGCATTACCCTT CTTCCCCGAATCTCCTCGTTGGCTGGCAAGTAAAGAGCGCTGGGAGGAGGCTTTGGATACTTTAGCGCTGCTGCA TGCCAAGGGCGACCGCAACGATCCCGTGGTCCAAGTGGAATACGAAGAAGTGCAGGAAGCAGCACGCATTGCCCA GGAGGCCAAGGACATTTCTTTCTTTTCACTGTTCGGACCAAAGATTTGGAAGCGAACCCTTTGCGGTGTCAGCGC CCAGGTCTGGCAGCAGTTGCTCGGAGGCAATGTTGCGATGTACTACGTCGTGTACATCTTCAACATGGCTGGCAT GGTAAGTCTATTTCTACTTCAAGAGGCAGGCCATGAAGCTCAACTGACGCTCTTTCTTAGTCTGGAAACACCACC CTGTACTCGTCAGCCATCCAGTACGTCATCTTCTTAGTCACAACGGGTACTATTCTGCCATTTGTTGATCGTATC GGTCGACGGCTTTTGCTCCTCACTGGATCCGTCCTCTGCATGGCTTGCCACTTTGCTATTGCTGGTCTTATGGCT TCACGTGGTCATCATGTTGACTCGGTCGATGGCAATGCGAACCTGAAGTGGTCAATTACGGGACCACCCGGCAAA GGTGTCATCGCCTGCTCGTACATCTTCGTTGCCGTTTATGGTTTCACCTGGGTACGTTGTTGTTTTCAATCCCTC GCGACGATTCAAGGTCAGCCTCAGCTAACGTGACATGAAATAGGCCCCAGTAGCATGGATCTATGCTTCTGAAGT CTTCCCCCTTAAGTACCGTGCAAAGGGTGTCGGTCTCTCAGCTGCGGGTAACTGGATTTTCAACTTCGCGTTGGC GTACTTTGTGGCTCCTGCTTTCACCAACATTCAGTGGAAGACTTATATCATCTTCGGTGTCTTTTGCACTGTGAT GACGTTCCATGTGTTCTTTTTCTACCCGGAGACTGCTCGACGATCGCTTGAAGACATTGACTTGATGTTTGAGAC GGACATGAAGCCCTGGAAGACGCACCAGATTCATGACCGCTTCGGCGAAGAAGTTGAGCGACACAAGCACAAGGA CATGGCTGACCAAGAAAAGGGAGTTGTGTCGACCCATGACGAAATGGCGTGA |