© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5689.t1 |
| Gene name | |
| Location | scaffold_032:324201..327013 |
| Strand | - |
| Gene length (bp) | 2812 |
| Transcript length (bp) | 2547 |
| Coding sequence length (bp) | 2547 |
| Protein length (aa) | 849 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00628 | PHD | PHD-finger | 2.0E-08 | 434 | 486 |
| Orthofinder run ID | 3 |
| Orthogroup | 5969 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5689.t1 MVSRKRTRSEVDAAPEQPPEEPGLLQKLRNCWEFASLMQYIAIFGKVMKIDEDFGIEDLETECLKPTPSEKLLEI GLCLLKWVSSHRGLTFDNFDEYTRRQYNAKAPHIPNPFGYEEVPKRFLDFDVFLKLRVLHQLSIWTFWNPDRIRE KMPEQRESDQTEWRIEEVGYDREGRYYYILDDNRLYRRTDPPIPPPKPAKSKSRRKSARAMRASKRRRVTGADPI EESDEEDNVVNGDASEDPLQAMTWECIAITLDDYKQFLESIRKTRDPDEKILRDRIDEQVMPIIEKEEEAQERQK QKREKELFNMQLLAGAKRSSRIAGKAEKERQEREAAEAARKRETELAAARKEEERVKKLEAERRSRIMTREQRTK DRERKRILHESELQRIKEEQEKVARGESRASERHLQAEMEKYRKNLEDLSQEDQWIFDCSGCGVHGQNLDDGSHS VACESCNVWQHSKCLGIPKSEAEREDFHFVCNDCKRREEEAKLPKLPPLKFRVGSSTSPSSAAPDGDTKIKVPDP EQSPISSIKTAQHTFQLPLTGSPQKQPPSMPSVPLQNPPQAVSFPPLSPERRPQSAHTTSFSPPRAPFSPSKGLN GHTPSSKDQIPKLPSIHQAMHLPPHSRESFSGGSFPARRPSSSHSTQSPTLPSPIQNRPSMSPTQGNRDVGPLAG FPPVASTDHSAPWTPYGQHQTPRPNTGNHSSFSSLHNGRPSFMATPTATRSSPPQSSHGVPLSGISPTKQSPRPM TSGSVTGAPVLPPIQKLEPSPKLMGRSSPDAPIPPPVKCMTPEQEERRQRENAMLQAQLHGTNGPHSVMSSPSLN RIPPLGPSAVAQQPAPSPQSGSK* |
| Coding | >Ani_SJS100_1|g5689.t1 ATGGTATCGCGAAAGCGCACCCGCTCCGAGGTGGATGCTGCCCCAGAGCAGCCACCTGAGGAGCCGGGTTTACTC CAGAAGCTTCGAAACTGCTGGGAGTTTGCAAGCCTAATGCAATACATTGCCATATTTGGGAAAGTTATGAAGATT GACGAGGATTTTGGGATTGAGGATCTGGAAACTGAGTGCCTAAAGCCTACCCCTTCCGAGAAACTACTGGAGATT GGTCTCTGTCTCTTGAAATGGGTGTCGTCGCATCGGGGCCTCACTTTCGATAACTTCGATGAGTACACGCGACGT CAGTACAATGCGAAAGCACCACACATTCCTAACCCTTTCGGGTACGAAGAGGTTCCGAAGAGGTTCTTGGACTTT GATGTTTTCTTGAAATTGCGCGTCTTGCACCAGCTGTCTATTTGGACCTTTTGGAATCCCGATCGCATCCGCGAG AAGATGCCGGAGCAAAGGGAATCGGATCAGACGGAGTGGCGTATCGAAGAAGTAGGCTACGATCGTGAAGGCCGT TACTACTATATTCTCGATGATAACAGGCTCTATCGCCGCACCGACCCCCCTATTCCGCCGCCAAAACCGGCCAAG TCGAAGTCGAGGAGAAAGAGCGCCCGTGCCATGAGAGCCTCCAAACGAAGACGAGTTACAGGCGCCGATCCCATT GAAGAGTCTGATGAGGAAGATAATGTTGTGAACGGCGACGCCTCAGAGGATCCTCTGCAAGCGATGACGTGGGAA TGCATCGCCATTACACTAGACGATTACAAGCAGTTCCTCGAGTCCATAAGGAAGACAAGGGACCCCGATGAAAAG ATCCTGAGGGATAGGATTGATGAACAAGTCATGCCCATTATTGAGAAGGAAGAGGAGGCACAAGAGAGACAGAAA CAGAAGCGCGAGAAGGAGCTTTTCAACATGCAGTTGCTCGCTGGGGCTAAACGGTCCAGTCGGATTGCCGGAAAG GCTGAGAAAGAGCGACAGGAGCGTGAGGCCGCTGAAGCAGCACGTAAACGAGAAACCGAACTAGCCGCAGCCCGC AAAGAGGAAGAAAGAGTGAAGAAGCTGGAGGCGGAAAGACGTTCGCGCATCATGACCCGGGAACAGCGTACTAAA GATCGCGAGAGGAAGCGGATACTACACGAAAGCGAGCTTCAGCGCATCAAAGAAGAGCAGGAGAAGGTTGCACGG GGTGAGAGCAGAGCCTCTGAGAGACATCTTCAAGCGGAAATGGAGAAGTACCGCAAGAATTTGGAAGACCTTTCG CAGGAGGATCAATGGATCTTCGACTGCTCAGGCTGCGGTGTTCATGGTCAGAATTTGGATGATGGCTCTCACAGT GTTGCATGCGAATCCTGCAACGTATGGCAGCACAGCAAGTGTCTCGGTATCCCCAAGAGTGAAGCCGAACGAGAG GATTTCCACTTCGTTTGCAATGACTGTAAACGGCGCGAAGAGGAAGCGAAGTTGCCCAAACTTCCACCGTTGAAA TTCCGCGTCGGCTCGTCGACCTCGCCGTCCTCAGCTGCGCCAGACGGAGATACCAAGATTAAAGTCCCAGATCCG GAACAAAGTCCCATATCGTCCATCAAAACCGCTCAGCATACCTTCCAGTTGCCTCTTACTGGGTCCCCTCAAAAG CAACCTCCTTCCATGCCTTCCGTTCCCTTACAAAACCCCCCTCAAGCCGTCTCCTTCCCTCCTCTGTCTCCCGAG CGCAGGCCTCAGTCCGCCCACACCACATCATTCAGCCCTCCTCGAGCTCCTTTCTCTCCTTCAAAGGGCTTGAAT GGACATACTCCGTCATCCAAGGATCAGATTCCGAAACTGCCATCCATCCATCAAGCAATGCATTTACCGCCCCAT TCTCGTGAGTCCTTCAGCGGCGGGTCGTTTCCGGCGCGGCGACCGTCGTCCTCTCACTCTACGCAAAGTCCCACT CTGCCTTCACCCATTCAAAATCGGCCATCTATGTCCCCAACGCAGGGAAACCGAGATGTTGGTCCTCTTGCGGGG TTTCCACCTGTAGCTTCGACAGATCACTCAGCCCCATGGACGCCGTACGGTCAACATCAAACCCCCCGTCCAAAT ACGGGCAATCATTCTTCCTTCTCTTCCCTGCATAACGGGCGTCCATCTTTCATGGCCACACCAACTGCAACTCGC TCCTCTCCTCCACAAAGTTCCCACGGTGTGCCTCTTTCGGGAATCAGTCCGACCAAGCAGTCACCCCGACCTATG ACATCTGGCAGCGTCACTGGAGCCCCAGTCCTTCCTCCGATTCAGAAGCTCGAGCCGAGTCCTAAACTAATGGGC CGAAGCTCACCTGATGCACCCATTCCGCCGCCGGTCAAATGCATGACACCGGAGCAAGAGGAGCGCAGGCAAAGG GAAAACGCCATGCTGCAGGCCCAATTGCACGGGACCAATGGCCCGCATTCAGTGATGTCGTCGCCATCGCTCAAT CGTATCCCACCTTTAGGGCCTTCTGCGGTTGCTCAACAGCCTGCGCCATCTCCTCAGTCCGGTTCAAAGTAA |
| Transcript | >Ani_SJS100_1|g5689.t1 ATGGTATCGCGAAAGCGCACCCGCTCCGAGGTGGATGCTGCCCCAGAGCAGCCACCTGAGGAGCCGGGTTTACTC CAGAAGCTTCGAAACTGCTGGGAGTTTGCAAGCCTAATGCAATACATTGCCATATTTGGGAAAGTTATGAAGATT GACGAGGATTTTGGGATTGAGGATCTGGAAACTGAGTGCCTAAAGCCTACCCCTTCCGAGAAACTACTGGAGATT GGTCTCTGTCTCTTGAAATGGGTGTCGTCGCATCGGGGCCTCACTTTCGATAACTTCGATGAGTACACGCGACGT CAGTACAATGCGAAAGCACCACACATTCCTAACCCTTTCGGGTACGAAGAGGTTCCGAAGAGGTTCTTGGACTTT GATGTTTTCTTGAAATTGCGCGTCTTGCACCAGCTGTCTATTTGGACCTTTTGGAATCCCGATCGCATCCGCGAG AAGATGCCGGAGCAAAGGGAATCGGATCAGACGGAGTGGCGTATCGAAGAAGTAGGCTACGATCGTGAAGGCCGT TACTACTATATTCTCGATGATAACAGGCTCTATCGCCGCACCGACCCCCCTATTCCGCCGCCAAAACCGGCCAAG TCGAAGTCGAGGAGAAAGAGCGCCCGTGCCATGAGAGCCTCCAAACGAAGACGAGTTACAGGCGCCGATCCCATT GAAGAGTCTGATGAGGAAGATAATGTTGTGAACGGCGACGCCTCAGAGGATCCTCTGCAAGCGATGACGTGGGAA TGCATCGCCATTACACTAGACGATTACAAGCAGTTCCTCGAGTCCATAAGGAAGACAAGGGACCCCGATGAAAAG ATCCTGAGGGATAGGATTGATGAACAAGTCATGCCCATTATTGAGAAGGAAGAGGAGGCACAAGAGAGACAGAAA CAGAAGCGCGAGAAGGAGCTTTTCAACATGCAGTTGCTCGCTGGGGCTAAACGGTCCAGTCGGATTGCCGGAAAG GCTGAGAAAGAGCGACAGGAGCGTGAGGCCGCTGAAGCAGCACGTAAACGAGAAACCGAACTAGCCGCAGCCCGC AAAGAGGAAGAAAGAGTGAAGAAGCTGGAGGCGGAAAGACGTTCGCGCATCATGACCCGGGAACAGCGTACTAAA GATCGCGAGAGGAAGCGGATACTACACGAAAGCGAGCTTCAGCGCATCAAAGAAGAGCAGGAGAAGGTTGCACGG GGTGAGAGCAGAGCCTCTGAGAGACATCTTCAAGCGGAAATGGAGAAGTACCGCAAGAATTTGGAAGACCTTTCG CAGGAGGATCAATGGATCTTCGACTGCTCAGGCTGCGGTGTTCATGGTCAGAATTTGGATGATGGCTCTCACAGT GTTGCATGCGAATCCTGCAACGTATGGCAGCACAGCAAGTGTCTCGGTATCCCCAAGAGTGAAGCCGAACGAGAG GATTTCCACTTCGTTTGCAATGACTGTAAACGGCGCGAAGAGGAAGCGAAGTTGCCCAAACTTCCACCGTTGAAA TTCCGCGTCGGCTCGTCGACCTCGCCGTCCTCAGCTGCGCCAGACGGAGATACCAAGATTAAAGTCCCAGATCCG GAACAAAGTCCCATATCGTCCATCAAAACCGCTCAGCATACCTTCCAGTTGCCTCTTACTGGGTCCCCTCAAAAG CAACCTCCTTCCATGCCTTCCGTTCCCTTACAAAACCCCCCTCAAGCCGTCTCCTTCCCTCCTCTGTCTCCCGAG CGCAGGCCTCAGTCCGCCCACACCACATCATTCAGCCCTCCTCGAGCTCCTTTCTCTCCTTCAAAGGGCTTGAAT GGACATACTCCGTCATCCAAGGATCAGATTCCGAAACTGCCATCCATCCATCAAGCAATGCATTTACCGCCCCAT TCTCGTGAGTCCTTCAGCGGCGGGTCGTTTCCGGCGCGGCGACCGTCGTCCTCTCACTCTACGCAAAGTCCCACT CTGCCTTCACCCATTCAAAATCGGCCATCTATGTCCCCAACGCAGGGAAACCGAGATGTTGGTCCTCTTGCGGGG TTTCCACCTGTAGCTTCGACAGATCACTCAGCCCCATGGACGCCGTACGGTCAACATCAAACCCCCCGTCCAAAT ACGGGCAATCATTCTTCCTTCTCTTCCCTGCATAACGGGCGTCCATCTTTCATGGCCACACCAACTGCAACTCGC TCCTCTCCTCCACAAAGTTCCCACGGTGTGCCTCTTTCGGGAATCAGTCCGACCAAGCAGTCACCCCGACCTATG ACATCTGGCAGCGTCACTGGAGCCCCAGTCCTTCCTCCGATTCAGAAGCTCGAGCCGAGTCCTAAACTAATGGGC CGAAGCTCACCTGATGCACCCATTCCGCCGCCGGTCAAATGCATGACACCGGAGCAAGAGGAGCGCAGGCAAAGG GAAAACGCCATGCTGCAGGCCCAATTGCACGGGACCAATGGCCCGCATTCAGTGATGTCGTCGCCATCGCTCAAT CGTATCCCACCTTTAGGGCCTTCTGCGGTTGCTCAACAGCCTGCGCCATCTCCTCAGTCCGGTTCAAAGTAA |
| Gene | >Ani_SJS100_1|g5689.t1 ATGGTATCGCGAAAGCGCACCCGCTCCGAGGTGGATGCTGCCCCAGAGCAGCCACCTGAGGAGCCGGGTTTACTC CAGAAGCTTCGAAACTGCTGGGAGTTTGCAAGCCTAATGCAATACATTGCCATATTTGGGAAAGTTATGAAGATT GACGAGGATTTTGGGATTGAGGTTCGCAGTGCAAATCCAACACCTCCAGTTTTCTTTACGTTTGGGCGCGTTCGA TCAATGCTAATAGTTTACTCCGATATTCTGCTTATAGGATCTGGAAACTGAGTGCCTAAAGCCTACCCCTTCCGA GAAACTACTGGAGATTGGTCTCTGTCTCTTGAAATGGGTGTCGTCGCATCGGGGCCTCACGTACGTGAACCGTTA TTCTGGCCATAACTGTAGCTATGCTAATAGGATGCTCCTGCTGATAGTTTCGATAACTTCGATGAGTACACGCGA CGTCAGTACAATGCGAAAGCACCACACATTCCTAACCCTTTCGGGTACGAAGAGGTTCCGAAGAGGTTCTTGGAC TTTGATGTTTTCTTGAAATTGCGCGTCTTGCACCAGCTGTCTATTTGGACCTTTTGGAATCCCGATCGCATCCGC GAGAAGATGCCGGAGCAAAGGGAATCGGATCAGACGGAGTGGGTGGGTTTTACGTGACACACCCCTGGATTCCTA TTATCCTTACTGACCTTTTGCTAGCGTATCGAAGAAGTAGGCTACGATCGTGAAGGCCGTTACTACTATATTCTC GATGATAACAGGCTCTATCGCCGCACCGACCCCCCTATTCCGCCGCCAAAACCGGCCAAGTCGAAGTCGAGGAGA AAGAGCGCCCGTGCCATGAGAGCCTCCAAACGAAGACGAGTTACAGGCGCCGATCCCATTGAAGAGTCTGATGAG GAAGATAATGTTGTGAACGGCGACGCCTCAGAGGATCCTCTGCAAGCGATGACGTGGGAATGCATCGCCATTACA CTAGACGATTACAAGCAGTTCCTCGAGTCCATAAGGAAGACAAGGGACCCCGATGAAAAGATCCTGAGGGATAGG ATTGATGAACAAGTCATGCCCATTATTGAGAAGGAAGAGGAGGCACAAGAGAGACAGAAACAGAAGCGCGAGAAG GAGCTTTTCAACATGCAGTTGCTCGCTGGGGCTAAACGGTCCAGTCGGATTGCCGGAAAGGCTGAGAAAGAGCGA CAGGAGCGTGAGGCCGCTGAAGCAGCACGTAAACGAGAAACCGAACTAGCCGCAGCCCGCAAAGAGGAAGAAAGA GTGAAGAAGCTGGAGGCGGAAAGACGTTCGCGCATCATGACCCGGGAACAGCGTACTAAAGATCGCGAGAGGAAG CGGATACTACACGAAAGCGAGCTTCAGCGCATCAAAGAAGAGCAGGAGAAGGTTGCACGGGGTGAGAGCAGAGCC TCTGAGAGACATCTTCAAGCGGAAATGGAGAAGTACCGCAAGAATTTGGAAGACCTTTCGCAGGAGGATCAATGG ATCTTCGACTGCTCAGGCTGCGGTGTTCATGGTCAGAATTTGGTAGGGCATAATCGTATCTTTAGATTCCTATGG CAAGTGTACTGATTTTCACTAGGATGATGGCTCTCACAGTGTTGCATGCGAATCCTGCAACGTATGGCAGCACAG CAAGTGTCTCGGTATCCCCAAGAGTGAAGCCGAACGAGAGGATTTCCACTTCGTTTGCAATGACTGTAAACGGCG CGAAGAGGAAGCGAAGTTGCCCAAACTTCCACCGTTGAAATTCCGCGTCGGCTCGTCGACCTCGCCGTCCTCAGC TGCGCCAGACGGAGATACCAAGATTAAAGTCCCAGATCCGGAACAAAGTCCCATATCGTCCATCAAAACCGCTCA GCATACCTTCCAGTTGCCTCTTACTGGGTCCCCTCAAAAGCAACCTCCTTCCATGCCTTCCGTTCCCTTACAAAA CCCCCCTCAAGCCGTCTCCTTCCCTCCTCTGTCTCCCGAGCGCAGGCCTCAGTCCGCCCACACCACATCATTCAG CCCTCCTCGAGCTCCTTTCTCTCCTTCAAAGGGCTTGAATGGACATACTCCGTCATCCAAGGATCAGATTCCGAA ACTGCCATCCATCCATCAAGCAATGCATTTACCGCCCCATTCTCGTGAGTCCTTCAGCGGCGGGTCGTTTCCGGC GCGGCGACCGTCGTCCTCTCACTCTACGCAAAGTCCCACTCTGCCTTCACCCATTCAAAATCGGCCATCTATGTC CCCAACGCAGGGAAACCGAGATGTTGGTCCTCTTGCGGGGTTTCCACCTGTAGCTTCGACAGATCACTCAGCCCC ATGGACGCCGTACGGTCAACATCAAACCCCCCGTCCAAATACGGGCAATCATTCTTCCTTCTCTTCCCTGCATAA CGGGCGTCCATCTTTCATGGCCACACCAACTGCAACTCGCTCCTCTCCTCCACAAAGTTCCCACGGTGTGCCTCT TTCGGGAATCAGTCCGACCAAGCAGTCACCCCGACCTATGACATCTGGCAGCGTCACTGGAGCCCCAGTCCTTCC TCCGATTCAGAAGCTCGAGCCGAGTCCTAAACTAATGGGCCGAAGCTCACCTGATGCACCCATTCCGCCGCCGGT CAAATGCATGACACCGGAGCAAGAGGAGCGCAGGCAAAGGGAAAACGCCATGCTGCAGGCCCAATTGCACGGGAC CAATGGCCCGCATTCAGTGATGTCGTCGCCATCGCTCAATCGTATCCCACCTTTAGGGCCTTCTGCGGTTGCTCA ACAGCCTGCGCCATCTCCTCAGTCCGGTTCAAAGTAA |