Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5644.t1
Gene name
Location	scaffold_032:178538..179312
Strand	+
Gene length (bp)	774
Transcript length (bp)	774
Coding sequence length (bp)	774
Protein length (aa)	258

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF09734	Tau95	RNA polymerase III transcription factor (TF)IIIC subunit HTH domain	5.2E-23	102	205

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5644.t1 MSFRRSSHVVNNSLGESNGEELIRQYQIGSKQEYGDNKVGADYYYETSGWMAFEGNANYDNNDDDDDGSTTDENL MDGPNQAGNDIEASVKFNREVAFTGITVNMNAAKIPDGSHQVDKIGSSVLNESVRETVRHIHEILERRPIVTVRV IKGQLQLRLQSDLQEALPFCGYMFTNGPWKKALIKFGVDPRIRPDFRFYQTVSFRMEFDPVVEPGKHDWIKKGVL AFPQLLEGNDNVSYISTARKLWPTVILGRSVT*
Coding	>Ani_SJS100_1\|g5644.t1 ATGAGCTTTAGAAGATCGTCTCATGTGGTCAACAATAGCCTTGGCGAGAGCAATGGCGAGGAGCTTATTCGCCAA TACCAGATTGGAAGCAAACAAGAGTACGGAGACAACAAGGTTGGAGCCGATTATTATTATGAGACATCGGGCTGG ATGGCTTTTGAAGGAAACGCAAACTACGACAACAACGATGACGACGATGACGGCAGCACGACCGATGAGAATCTC ATGGATGGACCCAATCAAGCCGGCAATGATATAGAGGCTAGCGTCAAATTCAATAGGGAAGTAGCGTTTACAGGT ATCACCGTCAATATGAACGCCGCGAAGATACCAGACGGCAGCCACCAGGTTGACAAGATTGGATCATCAGTCCTG AATGAGTCTGTTAGAGAAACGGTACGCCATATCCATGAAATCCTGGAGCGCCGGCCGATAGTGACAGTCAGGGTC ATCAAAGGCCAACTCCAGCTTCGTCTTCAGAGCGACCTTCAAGAAGCTCTGCCGTTTTGCGGTTACATGTTCACC AATGGTCCATGGAAGAAGGCATTGATCAAGTTCGGCGTTGACCCAAGGATCCGACCTGATTTCCGCTTTTACCAA ACAGTATCCTTCCGCATGGAGTTCGATCCTGTTGTGGAGCCCGGCAAGCATGACTGGATTAAGAAAGGCGTGCTC GCTTTCCCACAGCTACTCGAGGGAAACGACAATGTTTCCTACATTTCAACGGCAAGAAAATTGTGGCCGACGGTG ATACTTGGCAGATCTGTGACATAA
Transcript	>Ani_SJS100_1\|g5644.t1 ATGAGCTTTAGAAGATCGTCTCATGTGGTCAACAATAGCCTTGGCGAGAGCAATGGCGAGGAGCTTATTCGCCAA TACCAGATTGGAAGCAAACAAGAGTACGGAGACAACAAGGTTGGAGCCGATTATTATTATGAGACATCGGGCTGG ATGGCTTTTGAAGGAAACGCAAACTACGACAACAACGATGACGACGATGACGGCAGCACGACCGATGAGAATCTC ATGGATGGACCCAATCAAGCCGGCAATGATATAGAGGCTAGCGTCAAATTCAATAGGGAAGTAGCGTTTACAGGT ATCACCGTCAATATGAACGCCGCGAAGATACCAGACGGCAGCCACCAGGTTGACAAGATTGGATCATCAGTCCTG AATGAGTCTGTTAGAGAAACGGTACGCCATATCCATGAAATCCTGGAGCGCCGGCCGATAGTGACAGTCAGGGTC ATCAAAGGCCAACTCCAGCTTCGTCTTCAGAGCGACCTTCAAGAAGCTCTGCCGTTTTGCGGTTACATGTTCACC AATGGTCCATGGAAGAAGGCATTGATCAAGTTCGGCGTTGACCCAAGGATCCGACCTGATTTCCGCTTTTACCAA ACAGTATCCTTCCGCATGGAGTTCGATCCTGTTGTGGAGCCCGGCAAGCATGACTGGATTAAGAAAGGCGTGCTC GCTTTCCCACAGCTACTCGAGGGAAACGACAATGTTTCCTACATTTCAACGGCAAGAAAATTGTGGCCGACGGTG ATACTTGGCAGATCTGTGACATAA
Gene	>Ani_SJS100_1\|g5644.t1 ATGAGCTTTAGAAGATCGTCTCATGTGGTCAACAATAGCCTTGGCGAGAGCAATGGCGAGGAGCTTATTCGCCAA TACCAGATTGGAAGCAAACAAGAGTACGGAGACAACAAGGTTGGAGCCGATTATTATTATGAGACATCGGGCTGG ATGGCTTTTGAAGGAAACGCAAACTACGACAACAACGATGACGACGATGACGGCAGCACGACCGATGAGAATCTC ATGGATGGACCCAATCAAGCCGGCAATGATATAGAGGCTAGCGTCAAATTCAATAGGGAAGTAGCGTTTACAGGT ATCACCGTCAATATGAACGCCGCGAAGATACCAGACGGCAGCCACCAGGTTGACAAGATTGGATCATCAGTCCTG AATGAGTCTGTTAGAGAAACGGTACGCCATATCCATGAAATCCTGGAGCGCCGGCCGATAGTGACAGTCAGGGTC ATCAAAGGCCAACTCCAGCTTCGTCTTCAGAGCGACCTTCAAGAAGCTCTGCCGTTTTGCGGTTACATGTTCACC AATGGTCCATGGAAGAAGGCATTGATCAAGTTCGGCGTTGACCCAAGGATCCGACCTGATTTCCGCTTTTACCAA ACAGTATCCTTCCGCATGGAGTTCGATCCTGTTGTGGAGCCCGGCAAGCATGACTGGATTAAGAAAGGCGTGCTC GCTTTCCCACAGCTACTCGAGGGAAACGACAATGTTTCCTACATTTCAACGGCAAGAAAATTGTGGCCGACGGTG ATACTTGGCAGATCTGTGACATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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