© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5643.t1 |
| Gene name | |
| Location | scaffold_032:176978..177848 |
| Strand | + |
| Gene length (bp) | 870 |
| Transcript length (bp) | 807 |
| Coding sequence length (bp) | 807 |
| Protein length (aa) | 269 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01613 | Flavin_Reduct | Flavin reductase like domain | 4.2E-29 | 75 | 236 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0010181 | FMN binding | Yes |
| GO:0000166 | nucleotide binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0043168 | anion binding | No |
| GO:0005488 | binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0043167 | ion binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5643.t1 MLPYTRSILAACRTVGQFTGQYVPSIGPALRFGQLQSRTVTKVAAAARNPQSDLKGARHANTDVASLSDQVRLLM RRVPYPVAIITATDPNGPADKAFRGMTVSSFNTVTLSPEPVISFNVRRPSETLSALQLSKRFLVHLLAPRQATAT LARDFSKGNHNLSLLEGKSEYEFVAHEHSLSGNETSGRPLPLLRRKQDATSTGSEDFPFVLECQLHPQSIQVQDH TIVVGTVVRALSGELLSLDLETKAGDLCLTYANTYFWEMGHEI* |
| Coding | >Ani_SJS100_1|g5643.t1 ATGCTTCCTTATACTAGATCTATACTTGCGGCCTGTCGGACGGTGGGCCAATTCACAGGGCAATATGTACCATCT ATCGGACCAGCTCTCCGGTTCGGTCAACTGCAATCCCGAACGGTCACGAAAGTCGCCGCAGCCGCTAGAAACCCT CAATCTGACTTGAAAGGGGCTCGGCATGCAAATACTGATGTCGCCTCTTTATCCGATCAAGTCCGTCTCTTGATG AGACGAGTCCCCTACCCTGTCGCCATCATCACGGCCACTGATCCCAATGGCCCGGCAGATAAGGCCTTCCGCGGA ATGACCGTCTCCTCCTTCAACACCGTTACACTCAGTCCGGAACCCGTCATATCGTTTAACGTGCGCCGGCCCTCC GAGACGCTTAGCGCACTCCAATTGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGACAGGCAACCGCTACC CTTGCGCGGGACTTTTCCAAGGGCAACCACAATTTGTCCCTCTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCG CATGAACATTCCCTTTCTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGGAAGCAGGATGCTACG TCTACAGGATCGGAGGACTTTCCGTTCGTATTGGAGTGTCAGCTCCATCCACAGAGTATACAGGTCCAAGACCAT ACGATCGTCGTGGGAACTGTTGTTCGGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTTGGAGACTAAGGCTGGA GACCTTTGCCTCACGTACGCCAATACCTACTTCTGGGAAATGGGCCACGAGATATGA |
| Transcript | >Ani_SJS100_1|g5643.t1 ATGCTTCCTTATACTAGATCTATACTTGCGGCCTGTCGGACGGTGGGCCAATTCACAGGGCAATATGTACCATCT ATCGGACCAGCTCTCCGGTTCGGTCAACTGCAATCCCGAACGGTCACGAAAGTCGCCGCAGCCGCTAGAAACCCT CAATCTGACTTGAAAGGGGCTCGGCATGCAAATACTGATGTCGCCTCTTTATCCGATCAAGTCCGTCTCTTGATG AGACGAGTCCCCTACCCTGTCGCCATCATCACGGCCACTGATCCCAATGGCCCGGCAGATAAGGCCTTCCGCGGA ATGACCGTCTCCTCCTTCAACACCGTTACACTCAGTCCGGAACCCGTCATATCGTTTAACGTGCGCCGGCCCTCC GAGACGCTTAGCGCACTCCAATTGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGACAGGCAACCGCTACC CTTGCGCGGGACTTTTCCAAGGGCAACCACAATTTGTCCCTCTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCG CATGAACATTCCCTTTCTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGGAAGCAGGATGCTACG TCTACAGGATCGGAGGACTTTCCGTTCGTATTGGAGTGTCAGCTCCATCCACAGAGTATACAGGTCCAAGACCAT ACGATCGTCGTGGGAACTGTTGTTCGGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTTGGAGACTAAGGCTGGA GACCTTTGCCTCACGTACGCCAATACCTACTTCTGGGAAATGGGCCACGAGATATGA |
| Gene | >Ani_SJS100_1|g5643.t1 ATGCTTCCTTATACTAGATCTATACTTGCGGCCTGTCGGACGGTGGGCCAATTCACAGGTTAGCTGCGCTGCTTT CCATGCCTGCAAATTGCATTCGCTAATCAATTGTTTTCATGTAAAGGGCAATATGTACCATCTATCGGACCAGCT CTCCGGTTCGGTCAACTGCAATCCCGAACGGTCACGAAAGTCGCCGCAGCCGCTAGAAACCCTCAATCTGACTTG AAAGGGGCTCGGCATGCAAATACTGATGTCGCCTCTTTATCCGATCAAGTCCGTCTCTTGATGAGACGAGTCCCC TACCCTGTCGCCATCATCACGGCCACTGATCCCAATGGCCCGGCAGATAAGGCCTTCCGCGGAATGACCGTCTCC TCCTTCAACACCGTTACACTCAGTCCGGAACCCGTCATATCGTTTAACGTGCGCCGGCCCTCCGAGACGCTTAGC GCACTCCAATTGTCCAAGCGCTTCCTTGTGCACCTCCTGGCTCCTCGACAGGCAACCGCTACCCTTGCGCGGGAC TTTTCCAAGGGCAACCACAATTTGTCCCTCTTGGAGGGGAAGAGTGAATATGAGTTCGTTGCGCATGAACATTCC CTTTCTGGTAATGAAACTTCCGGCAGGCCTCTTCCGCTGTTGCGGAGGAAGCAGGATGCTACGTCTACAGGATCG GAGGACTTTCCGTTCGTATTGGAGTGTCAGCTCCATCCACAGAGTATACAGGTCCAAGACCATACGATCGTCGTG GGAACTGTTGTTCGGGCACTTTCAGGGGAGTTGTTGAGCCTTGACTTGGAGACTAAGGCTGGAGACCTTTGCCTC ACGTACGCCAATACCTACTTCTGGGAAATGGGCCACGAGATATGA |