Protein ID | Ani_SJS100_1|g5641.t1 |
Gene name | |
Location | scaffold_032:173589..175590 |
Strand | + |
Gene length (bp) | 2001 |
Transcript length (bp) | 1704 |
Coding sequence length (bp) | 1704 |
Protein length (aa) | 568 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09325 | Vps5 | Vps5 C terminal like | 4.5E-90 | 298 | 528 |
PF00787 | PX | PX domain | 7.5E-22 | 199 | 276 |
GO Term | Description | Terminal node |
---|---|---|
GO:0035091 | phosphatidylinositol binding | Yes |
GO:0008289 | lipid binding | No |
GO:0005488 | binding | No |
GO:0005543 | phospholipid binding | No |
GO:0003674 | molecular_function | No |
Orthofinder run ID | 3 |
Orthogroup | 5925 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5641.t1 MDLDAGDSPWGDVPSQSTTTHQASRSEVEETSPDQSTQQASPSAARSPVRRGPRGTRRINAQATKLEAVDDSFDP LGPLGDKAETSPLEQAPAPPQKEVFSGRNVRPTSSASQASTGTGLADSVNLEEDGAGFRGPPPVQPPSDAEGAKR QSEPSISVEKAANPTFDITVGDPHKVGDLTSSHIVYQVRTKTTSKAYRQPEFTVSRRYRDFLWLYNSMHNNNPGV VVPPPPEKQAVGRFDTNFVESRRAALERMLNKIAAHPILQHDGDLKIFLESETFTMDVKNKENREPDLGQNKGMF SSFGISVGGGGKFVEHDDWFHDRKIYLDALENQLKALMKSVDTVVAQRKGLAEAAGDFSASLHALAAVELSPALS TPLDGLSDLQLRIRELYERQAQQDVLTLGITIDEYLRLIGSVKTAFSQRQKAFHSWHAAEAEMQKRKHTQEKLLR QGKTQQDRLTQVNADVADAERKVHQARLLFEDMGRLMRNELQRFEKEKVEDFKSGVETFLESAVEAQKELIELWE TFLLQLDAGEEGNPLYGTAGVSDASAPPAVEDTAEATPAEEA* |
Coding | >Ani_SJS100_1|g5641.t1 ATGGATCTCGACGCTGGCGACTCCCCGTGGGGCGATGTGCCTTCACAATCGACCACCACCCATCAAGCATCCCGA TCCGAAGTAGAAGAAACGTCTCCCGATCAATCGACACAACAAGCTAGCCCCAGTGCCGCCCGTTCCCCTGTACGA CGAGGCCCACGAGGCACCCGAAGGATCAATGCGCAAGCGACGAAGCTAGAGGCGGTGGATGACTCGTTTGATCCT CTTGGTCCGCTCGGAGACAAGGCGGAAACTAGTCCACTTGAGCAGGCACCTGCCCCGCCGCAGAAGGAGGTCTTC TCAGGGCGCAATGTTCGTCCCACATCATCTGCCTCCCAAGCGTCCACAGGAACTGGCTTGGCGGATTCCGTGAAT CTGGAAGAGGATGGTGCAGGGTTCCGAGGGCCTCCGCCGGTACAACCCCCGAGTGACGCAGAAGGGGCGAAACGG CAATCCGAACCCAGTATTAGCGTGGAGAAAGCTGCGAACCCGACCTTCGATATCACTGTCGGCGATCCGCACAAG GTCGGAGATCTCACCAGCAGTCATATTGTGTACCAAGTGAGAACCAAGACGACCTCCAAAGCCTACCGACAACCG GAGTTTACTGTCAGCCGCAGATACCGTGATTTCCTTTGGCTCTATAATTCGATGCACAACAATAACCCCGGTGTT GTTGTCCCCCCTCCTCCAGAGAAGCAAGCGGTGGGCCGTTTCGATACGAACTTCGTCGAGTCTAGGAGGGCTGCC CTTGAGCGGATGCTGAACAAGATTGCGGCGCACCCTATTCTCCAGCATGACGGCGATCTTAAAATCTTCCTCGAG AGCGAAACCTTTACCATGGACGTGAAGAACAAGGAAAACAGGGAACCGGACCTTGGCCAGAACAAGGGCATGTTC AGTTCCTTTGGCATTAGCGTCGGTGGCGGTGGAAAGTTCGTCGAGCATGATGATTGGTTTCATGACCGCAAGATC TACCTGGACGCCCTAGAGAATCAACTCAAGGCATTGATGAAGTCGGTTGACACAGTGGTGGCGCAGCGCAAGGGG CTGGCCGAGGCTGCTGGCGACTTTTCGGCTTCCCTCCATGCATTGGCAGCTGTCGAGCTGTCTCCTGCACTTTCT ACCCCTCTGGACGGTCTTTCCGACCTACAACTACGGATAAGGGAGCTATACGAACGCCAAGCTCAACAGGATGTT CTCACCCTGGGAATCACAATCGACGAGTATCTTCGTTTGATTGGAAGTGTGAAGACGGCCTTCTCTCAGCGCCAG AAGGCTTTCCACAGCTGGCACGCGGCGGAAGCGGAAATGCAGAAGCGCAAACATACCCAAGAGAAGCTTCTCAGA CAGGGTAAGACGCAGCAGGATCGTCTGACCCAAGTCAATGCCGATGTGGCCGATGCCGAGAGGAAGGTTCATCAG GCACGACTCCTCTTCGAGGATATGGGTCGACTTATGCGAAATGAGCTCCAACGATTCGAGAAGGAGAAGGTGGAG GACTTCAAATCTGGCGTTGAGACCTTCTTGGAGAGTGCAGTGGAAGCGCAAAAGGAGTTGATTGAGCTTTGGGAA ACATTCCTCTTGCAGCTGGATGCGGGTGAAGAAGGAAACCCTCTCTACGGCACCGCGGGAGTGAGCGATGCTTCT GCACCCCCTGCGGTCGAGGACACCGCCGAAGCTACTCCAGCAGAGGAGGCATAG |
Transcript | >Ani_SJS100_1|g5641.t1 ATGGATCTCGACGCTGGCGACTCCCCGTGGGGCGATGTGCCTTCACAATCGACCACCACCCATCAAGCATCCCGA TCCGAAGTAGAAGAAACGTCTCCCGATCAATCGACACAACAAGCTAGCCCCAGTGCCGCCCGTTCCCCTGTACGA CGAGGCCCACGAGGCACCCGAAGGATCAATGCGCAAGCGACGAAGCTAGAGGCGGTGGATGACTCGTTTGATCCT CTTGGTCCGCTCGGAGACAAGGCGGAAACTAGTCCACTTGAGCAGGCACCTGCCCCGCCGCAGAAGGAGGTCTTC TCAGGGCGCAATGTTCGTCCCACATCATCTGCCTCCCAAGCGTCCACAGGAACTGGCTTGGCGGATTCCGTGAAT CTGGAAGAGGATGGTGCAGGGTTCCGAGGGCCTCCGCCGGTACAACCCCCGAGTGACGCAGAAGGGGCGAAACGG CAATCCGAACCCAGTATTAGCGTGGAGAAAGCTGCGAACCCGACCTTCGATATCACTGTCGGCGATCCGCACAAG GTCGGAGATCTCACCAGCAGTCATATTGTGTACCAAGTGAGAACCAAGACGACCTCCAAAGCCTACCGACAACCG GAGTTTACTGTCAGCCGCAGATACCGTGATTTCCTTTGGCTCTATAATTCGATGCACAACAATAACCCCGGTGTT GTTGTCCCCCCTCCTCCAGAGAAGCAAGCGGTGGGCCGTTTCGATACGAACTTCGTCGAGTCTAGGAGGGCTGCC CTTGAGCGGATGCTGAACAAGATTGCGGCGCACCCTATTCTCCAGCATGACGGCGATCTTAAAATCTTCCTCGAG AGCGAAACCTTTACCATGGACGTGAAGAACAAGGAAAACAGGGAACCGGACCTTGGCCAGAACAAGGGCATGTTC AGTTCCTTTGGCATTAGCGTCGGTGGCGGTGGAAAGTTCGTCGAGCATGATGATTGGTTTCATGACCGCAAGATC TACCTGGACGCCCTAGAGAATCAACTCAAGGCATTGATGAAGTCGGTTGACACAGTGGTGGCGCAGCGCAAGGGG CTGGCCGAGGCTGCTGGCGACTTTTCGGCTTCCCTCCATGCATTGGCAGCTGTCGAGCTGTCTCCTGCACTTTCT ACCCCTCTGGACGGTCTTTCCGACCTACAACTACGGATAAGGGAGCTATACGAACGCCAAGCTCAACAGGATGTT CTCACCCTGGGAATCACAATCGACGAGTATCTTCGTTTGATTGGAAGTGTGAAGACGGCCTTCTCTCAGCGCCAG AAGGCTTTCCACAGCTGGCACGCGGCGGAAGCGGAAATGCAGAAGCGCAAACATACCCAAGAGAAGCTTCTCAGA CAGGGTAAGACGCAGCAGGATCGTCTGACCCAAGTCAATGCCGATGTGGCCGATGCCGAGAGGAAGGTTCATCAG GCACGACTCCTCTTCGAGGATATGGGTCGACTTATGCGAAATGAGCTCCAACGATTCGAGAAGGAGAAGGTGGAG GACTTCAAATCTGGCGTTGAGACCTTCTTGGAGAGTGCAGTGGAAGCGCAAAAGGAGTTGATTGAGCTTTGGGAA ACATTCCTCTTGCAGCTGGATGCGGGTGAAGAAGGAAACCCTCTCTACGGCACCGCGGGAGTGAGCGATGCTTCT GCACCCCCTGCGGTCGAGGACACCGCCGAAGCTACTCCAGCAGAGGAGGCATAG |
Gene | >Ani_SJS100_1|g5641.t1 ATGGATCTCGACGCTGGCGACTCCCCGTGGGGCGGTAAGCAACCAGGCAGTCACGGATACAATCGCATCGTGCTT CGTCTAACACAGGTATGCAGATGTGCCTTCACAATCGACCACCACCCATCAAGCATCCCGATCCGAAGTAGAAGA AACGTGTATGTTCCTAAATGAGCATCTTGCATCCCTGTACCTCTTATCCGAGCTTTCTAACCCGATGACGACACT CCTCAGCTCCCGATCAATCGACACAACAAGCTAGCCCCAGTGCCGCCCGTTCCCCTGTACGACGAGGCCCACGAG GCACCCGAAGGATCAATGCGCAAGCGACGAAGCTAGAGGCGGTGGATGACTCGTTTGATCCTCTTGGTCCGCTCG GAGACAAGGCGGAAACTAGTCCACTTGAGCAGGCACCTGCCCCGCCGCAGAAGGAGGTCTTCTCAGGGCGCAATG TTCGTCCCACATCATCTGCCTCCCAAGCGTCCACAGGAACTGGCTTGGCGGATTCCGTGAATCTGGAAGAGGATG GTGCAGGGTTCCGAGGGCCTCCGCCGGTACAACCCCCGAGTGACGCAGAAGGGGCGAAACGGCAATCCGAACCCA GTATTAGCGTGGAGAAAGCTGCGAACCCGACCTTCGATATCACTGTCGGCGATCCGCACAAGGTCGGAGATCTCA CCAGCAGTCATATTGTGTACCAAGTGAGAACCAAGGTATGTCATTTCGGTGGGATGCCGTAGGACTCCGCTCATG CTATATATAGACGACCTCCAAAGCCTACCGACAACCGGAGTTTACTGTCAGCCGCAGATACCGTGATTTCCTTTG GCTCTATAATTCGATGCACAACAATAACCCCGGTGTTGTTGTCCCCCCTCCTCCAGAGAAGCAAGCGGTGGGCCG TTTCGATACGAACTTCGTCGAGTCTAGGAGGGCTGCCCTTGAGCGGATGCTGAACAAGATTGCGGCGCACCCTAT TCTCCAGCATGACGGCGATCTTAAAATCTTCCTCGAGAGCGAAACCTTTACCATGGACGTGAAGAACAAGGAAAA CAGGGAACCGGACCTTGGCCAGAACAAGGGCATGTTCAGTTCCTTTGGCATTAGCGTCGGTGGCGGTGGAAAGTT CGTCGAGCATGATGATGTAAGTTTGTCTACAAGTGCAAGCGGGTAGCAGTGCTGACAACTCCAGTGGTTTCATGA CCGCAAGATCTACCTGGACGCCCTAGAGAATCAACTCAAGGCATTGATGAAGTCGGTTGACACAGTGGTGGCGCA GCGCAAGGGGCTGGCCGAGGCTGCTGGCGACTTTTCGGCTTCCCTCCATGCATTGGCAGCTGTCGAGCTGTCTCC TGCACTTTCTACCCCTCTGGACGGTCTTTCCGACCTACAACTACGGATAAGGGAGCTATACGAACGCCAAGCTCA ACAGGATGTTCTCACCCTGGGAATCACAATCGACGAGTATCTTCGTTTGATTGGAAGTGTGAAGACGGCCTTCTC TCAGCGCCAGAAGGCTTTCCACAGCTGGCACGCGGCGGAAGCGGAAATGCAGAAGCGCAAACATACCCAAGAGAA GCTTCTCAGACAGGGTAAGACGCAGCAGGATCGTCTGACCCAAGTCAATGCCGATGTGGCCGATGCCGAGAGGAA GGTTCATCAGGCACGACTCCTCTTCGAGGATATGGGTCGACTTATGCGAAATGAGCTCCAACGATTCGAGAAGGA GAAGGTGGAGGACTTCAAATCTGGCGTTGAGACCTTCTTGGAGAGTGCAGTGGAAGCGCAAAAGGAGGTGAGCAG CTACATGCCAGGTATTCCAATCGTCACAAATGTTTGCTAATAGAGATCTCGCAGTTGATTGAGCTTTGGGAAACA TTCCTCTTGCAGCTGGATGCGGGTGAAGAAGGAAACCCTCTCTACGGCACCGCGGGAGTGAGCGATGCTTCTGCA CCCCCTGCGGTCGAGGACACCGCCGAAGCTACTCCAGCAGAGGAGGCATAG |