Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5634.t1
Gene name
Locationscaffold_032:159686..160212
Strand-
Gene length (bp)526
Transcript length (bp)261
Coding sequence length (bp)261
Protein length (aa) 87

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08571 Yos1 Yos1-like 4.9E-36 6 86

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.5

Transmembrane Domains

Domain # Start End Length
1 2 24 22
2 66 85 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5634.t1
MFFFGLGKLVYVIILLINSLAVLSEDRFLARIGWGRTQNDPAFGATYDTTSVKAKTINLIASVRTVMRIPLIVIN
TIIIVYELILG*
Coding >Ani_SJS100_1|g5634.t1
ATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACGTCATCATCCTCCTCATCAACTCCCTCGCTGTCCTCTCCGAA
GACCGCTTCCTAGCCAGAATCGGATGGGGCCGCACACAAAATGACCCTGCTTTCGGCGCAACCTACGATACTACC
AGCGTCAAAGCGAAGACTATTAATCTGATTGCGAGTGTAAGGACTGTTATGCGAATACCGCTTATTGTGATCAAT
ACGATAATTATCGTGTACGAGCTTATTCTGGGTTAA
Transcript >Ani_SJS100_1|g5634.t1
ATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACGTCATCATCCTCCTCATCAACTCCCTCGCTGTCCTCTCCGAA
GACCGCTTCCTAGCCAGAATCGGATGGGGCCGCACACAAAATGACCCTGCTTTCGGCGCAACCTACGATACTACC
AGCGTCAAAGCGAAGACTATTAATCTGATTGCGAGTGTAAGGACTGTTATGCGAATACCGCTTATTGTGATCAAT
ACGATAATTATCGTGTACGAGCTTATTCTGGGTTAA
Gene >Ani_SJS100_1|g5634.t1
ATGTTCTTCTTCGGTCTTGGGAAACTCGTCTACGGTGCGCATAATCCATGTCTCCCCTCCCCCTCCCACGACTCA
GCTCACAGGAGACAACAAGTAACTAACTCAATCGCATAATCACAGTCATCATCCTCCTCATCAACTCCCTCGCTG
TCCTCTCCGAAGACCGCTTCCTAGCCAGAAGTACGCCATTCCCCCATCTGCCACGAGGAAAGCAATAATGAATAA
ATGATTAACTCATGAAATTGAAAACAGTCGGATGGGGCCGCACACAAAATGACCCTGCTTTCGGCGCAACCTACG
ATACTACCAGCGTCAAAGCGAAGACTATTAATCTGATTGCGAGTGTAAGGACTGTTATGCGAAGTACGTCATCCC
TCTTACTCAAATTGTGATTACGCTTGCGAAATGGTGGAATGAAAGGAAAGAAAGAAAGGGAAACACAAGCTAACC
GACCGCGGGGAATTGTTTAGTACCGCTTATTGTGATCAATACGATAATTATCGTGTACGAGCTTATTCTGGGTTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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