Protein ID | Ani_SJS100_1|g5622.t1 |
Gene name | |
Location | scaffold_032:119089..121626 |
Strand | + |
Gene length (bp) | 2537 |
Transcript length (bp) | 1365 |
Coding sequence length (bp) | 1365 |
Protein length (aa) | 455 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF09335 | SNARE_assoc | SNARE associated Golgi protein | 2.7E-10 | 146 | 255 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 41 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 86 | 108 | 22 |
2 | 123 | 145 | 22 |
3 | 158 | 180 | 22 |
4 | 232 | 254 | 22 |
5 | 274 | 296 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5622.t1 MPADYSSTARALSVSTSSPEPLSPSEDEAYPPWSRRAPGRRNSASISGGRSATLRDQIIDRATKTYHQILESWRK MNFWQRVGAVAAFLLANLLGIGFLVFTGKVFIWLQPVAAQWEHSPLAYGVLWLCVFFVSFPPLVGWSTFGTMAGY IFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLMERDKRFAALSLTLKYDGLKLLCMIRLCPLPYSVCNGA VSTFPTVQPLMYGLATALISPKLLVPAFIGNRLRVLSENNEEMSAGSKAVNICSIIVSICIGIFTGLYIYRRTLA RAKELEAKEREDIRRSLQADHAAHRPHDAFSEDPEVNSAAALLARDEEERIGFGDLDDDHVDLAIDDESGSETSP HRTQASPYRDEFTDNDSDVFKDGDGTHEEMRRYSLPAGEGPVVLLATNSIPAYKIHFTSLVQALSSPVQWTDRDG ARHG* |
Coding | >Ani_SJS100_1|g5622.t1 ATGCCAGCGGATTACTCATCCACCGCCCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTCG GAGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAAATTCAGCCAGTATCTCCGGCGGACGA TCCGCTACCCTCCGAGATCAAATCATAGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAAG ATGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCAATCTCCTTGGAATCGGCTTTCTTGTC TTCACCGGGAAGGTCTTCATTTGGCTTCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGTT TTGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGTCCACATTTGGAACTATGGCGGGCTAC ATCTTTGGGATATGGAAAGGATGGCTTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTGTTCTTTCATTGTG TCTCGGACAATCCTATCCAAATTCGTCCACCGGTTGATGGAACGCGATAAGAGATTTGCAGCTTTGTCGTTGACG TTGAAGTATGACGGTTTGAAATTGCTGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGTATGCAATGGGGCG GTCTCAACCTTCCCCACGGTTCAGCCGTTGATGTATGGGCTTGCCACAGCACTCATTTCGCCGAAGCTGCTGGTT CCAGCCTTCATCGGCAACCGGTTACGCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGGCTCCAAGGCTGTC AATATTTGCAGCATCATCGTCTCCATTTGCATCGGTATCTTCACGGGATTGTATATATATAGAAGAACATTGGCC CGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATCCGACGCTCGCTGCAAGCTGACCATGCTGCCCATCGT CCCCATGACGCCTTTTCCGAGGATCCTGAAGTCAACAGTGCGGCCGCTCTTCTTGCGCGCGATGAAGAGGAACGC ATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTGGCGATTGACGATGAGAGTGGCAGTGAGACCTCCCCC CACCGTACACAAGCCTCCCCTTATCGCGATGAGTTTACCGACAACGATTCAGATGTCTTCAAGGATGGAGATGGG ACCCATGAGGAAATGCGGCGGTATTCTCTTCCTGCCGGCGAAGGACCTGTTGTCCTGTTAGCCACTAACTCCATC CCGGCATATAAGATACATTTCACATCCCTGGTCCAGGCCTTATCTTCACCCGTCCAATGGACTGATCGTGATGGA GCTCGCCATGGATGA |
Transcript | >Ani_SJS100_1|g5622.t1 ATGCCAGCGGATTACTCATCCACCGCCCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTCG GAGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAAATTCAGCCAGTATCTCCGGCGGACGA TCCGCTACCCTCCGAGATCAAATCATAGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAAG ATGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCAATCTCCTTGGAATCGGCTTTCTTGTC TTCACCGGGAAGGTCTTCATTTGGCTTCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGTT TTGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGTCCACATTTGGAACTATGGCGGGCTAC ATCTTTGGGATATGGAAAGGATGGCTTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTGTTCTTTCATTGTG TCTCGGACAATCCTATCCAAATTCGTCCACCGGTTGATGGAACGCGATAAGAGATTTGCAGCTTTGTCGTTGACG TTGAAGTATGACGGTTTGAAATTGCTGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGTATGCAATGGGGCG GTCTCAACCTTCCCCACGGTTCAGCCGTTGATGTATGGGCTTGCCACAGCACTCATTTCGCCGAAGCTGCTGGTT CCAGCCTTCATCGGCAACCGGTTACGCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGGCTCCAAGGCTGTC AATATTTGCAGCATCATCGTCTCCATTTGCATCGGTATCTTCACGGGATTGTATATATATAGAAGAACATTGGCC CGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATCCGACGCTCGCTGCAAGCTGACCATGCTGCCCATCGT CCCCATGACGCCTTTTCCGAGGATCCTGAAGTCAACAGTGCGGCCGCTCTTCTTGCGCGCGATGAAGAGGAACGC ATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTGGCGATTGACGATGAGAGTGGCAGTGAGACCTCCCCC CACCGTACACAAGCCTCCCCTTATCGCGATGAGTTTACCGACAACGATTCAGATGTCTTCAAGGATGGAGATGGG ACCCATGAGGAAATGCGGCGGTATTCTCTTCCTGCCGGCGAAGGACCTGTTGTCCTGTTAGCCACTAACTCCATC CCGGCATATAAGATACATTTCACATCCCTGGTCCAGGCCTTATCTTCACCCGTCCAATGGACTGATCGTGATGGA GCTCGCCATGGATGA |
Gene | >Ani_SJS100_1|g5622.t1 ATGCCAGCGGATTACTCATCCACCGCCCGGGCACTGTCCGTCTCGACCTCATCCCCAGAACCTCTGTCTCCGTCG GAGGATGAGGCTTATCCACCATGGAGCCGAAGAGCACCGGGGAGGCGAAATTCAGCCAGTATCTCCGGCGGACGA TCCGCTACCCTCCGAGATCAAATCATAGACCGAGCAACCAAGACATACCACCAGATCCTGGAATCGTGGCGCAAG ATGAACTTCTGGCAAAGGGTAGGGGCGGTGGCCGCGTTCTTACTGGCCAATCTCCTTGGAATCGGCTTTCTTGTC TTCACCGGGAAGGTCTTCATTTGGCTTCAACCTGTGGCGGCACAATGGGAGCATTCTCCTCTAGCCTACGGGGTT TTGTGGTTGTGTGTTTTCTTTGTCTCCTTTCCGCCGTTGGTTGGATGGTCCACATTTGGAACTATGGCGGGCTAC ATCTTTGGGATATGGAAAGGGTGAGTTGAGAATTTTCATGGGTGCGCAAGAGGGCTAACCCCGTTCATAGATGGC TTCTTTATGCTTCCGCAACTGTGCTTGGGTCGACTTGTTCTTTCATTGTGTCTCGGACAATCCTATCCAAATTCG TCCACCGGTTGATGGAACGCGATAAGAGATTTGCAGCTTTGTCGTTGACGTTGAAGTATGACGGTTTGAAATTGC TGTGTATGATCCGCCTCTGCCCGCTGCCCTACTCGGTATGCAATGGGGCGGTCTCAACCTTCCCCACGGTTCAGC CGTTGATGTATGGGCTTGCCACAGCACTCATTTCGCCGAAGCTGCTGGTTCCAGCCTTCATCGGCAACCGGTTAC GCGTCTTGTCGGAGAACAATGAAGAGATGAGTGCAGGCTCCAAGGCTGTCAATATTTGCAGCATCATCGTCTCCA TTTGCATCGGTATCTTCACGGGATTGTATATATATAGAAGGTAAGAGTCAAGATATCTCCTTGCATTGTCCCGAT ATCCGAGACTAACGCAATTCAACAAGAACATTGGCCCGGGCCAAAGAGCTAGAGGCGAAAGAAAGGGAGGACATC CGACGCTCGCTGCAAGCTGACCATGCTGCCCATCGTCCCCATGACGCCTTTTCCGAGGATCCTGAAGTCAACAGT GCGGCCGCTCTTCTTGCGCGCGATGAAGAGGAACGCATCGGATTCGGCGACCTCGACGACGACCACGTCGACCTG GCGATTGACGATGAGAGTGGCAGTGAGACCTCCCCCCACCGTACACAAGCCTCCCCTTATCGCGATGAGTTTACC GACAACGATTCAGATGTCTTCAAGGATGGAGATGGGACCCATGAGGAAATGTATACCCTACATACACACGTGCGG AGACCCTAGGGCTCATAGTCGGCCCGGGACAGTCAATGGCGAGGGTGTTGGTGGCTACGTGATAGAAATCTGCGG TTACGAGTGATGACAGCACACTTTCCGGGTGGACATGACGGTTTGTAAATTCCCTTGGGGGGTTTCGTAAATATT ATAATTGGGCGAGGGGCCATAGGAGCCCGGCTTCTGGCTATGCCTCTAGACTGTTGAACACCAGGCTGTGTTAGT CCTTGTATAAAGTAACTTTAGAATCTCTGCAGGTAGGTCTACTGATCAGGAAGGCAATCCTCAGATACTACTAAA GACCTCGTCCTGTAAGTCACCGGCGTGGACTGGAATATTGAGACGGTGGTGACGAGTGCAACGTCCCAAGAAGTG TGAGGTCCACCTTGAGCGCTGGTGTTGCGGGAGGATCCGGGAGCGTTGAGCAAGGCTGAGAGGGGCAATGGTCAG ACCGCAAAAGCAGCATCTCGCGGAGGTGCTCTTAGCCAGATTTGACTGGCTTAAGAGAAGACTTGGAAAAGCAAA GAAAGGGGGAGATGGACACGAAGTCAGTCTTCAGGCTGACGATAGCACACGATGACGGCCAGCAGGAATGTAACG AAAGCAATGAAAGTATTGGTTGGTCGGACTGAAAATTACGCGGGGTTCCGGCCGAATTTCCCGCCGACTTTCTTT CCCTTTTCGAGTCCGACAGCCTCAAGGCAAGATTGTCCGTCTACTTTGAACTGACTCCCTTCGGCCTCTGCATCG TGTCTCTTCCCCCCATCCCTTGATTCGTTGTCTCCATATTCCACTCCTCAGGCGGCGGTATTCTCTTCCTGCCGG TAAGTCGGTCGCTACCTACTCCGTACCACTCAGATCCCCCTGCGGTTTCCTTGTCCTACTACTAGTAGGGTTTGC GCCGCTGCCAGAAACAAGCCAACCAACGTGATGGATTCGCAGGCGAAGGACCTGTTGTCCTGTTAGCCACTAACT CCATCCCGGCATGTATGTCAACTGGTCATTCCCTGCGTCAGGCTCATTCATACTTGTCTTGGACTTTCCCCAGTG TTCCCCCGCAAATCATATATGATATCGAGTGGTCCGCTGACCTTGAATTGAAAGATAAGATACATTTCACATCCC TGGTCCAGGCCTTATCTTCACCCGTCCAATGGACTGATCGTGATGGAGCTCGCCATGGATGA |