© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5600.t1 |
| Gene name | |
| Location | scaffold_032:47012..48399 |
| Strand | + |
| Gene length (bp) | 1387 |
| Transcript length (bp) | 1206 |
| Coding sequence length (bp) | 1206 |
| Protein length (aa) | 402 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02586 | SRAP | SOS response associated peptidase (SRAP) | 1.8E-80 | 1 | 263 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0003697 | single-stranded DNA binding | Yes |
| GO:0018142 | protein-DNA covalent cross-linking | Yes |
| GO:0006974 | cellular response to DNA damage stimulus | Yes |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0033554 | cellular response to stress | No |
| GO:0019538 | protein metabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0043412 | macromolecule modification | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0006950 | response to stress | No |
| GO:0003677 | DNA binding | No |
| GO:0018143 | nucleic acid-protein covalent cross-linking | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0036211 | protein modification process | No |
| GO:0050896 | response to stimulus | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5600.t1 MCGRYALGVRMSFIRRRLQDQGLQVDDAPPDEDVRETYNFAPGNSGAVYLADTHMYPSSHQHDEPASQPDTEKET AEGEETGGEKKSNATKYKLHSMRWGLIPFWTKRNPDYGSIMRTINCRDDSLIEDRGLWTSMKRRKRCVVVCQGFY EWLKKGPGGKEKVPHFVKRKDGDLMYFAGLWDSVKYEDSDDYLYTYTIITTSSNSYLKFLHDRMPVILDPNSEQM KTWLDPSRTEWSKELQSILKPYEGELECYPVPKEVGKVGNNSPDFIVPVSSKENKSNIANFLANAKKGAAVKVEE GVKDERPTKDAEWSEDNAPKPVSGVKREHSPGVETEDTKLQKTEPSVASSPKKSPEMSSPSKPETPAGKKTRSAT HNKPMKKSPQKQPPAGTQRITNFFGK* |
| Coding | >Ani_SJS100_1|g5600.t1 ATGTGTGGACGATACGCTTTAGGCGTGCGCATGAGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCAAGTC GACGACGCACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTCGCTCCAGGGAACAGCGGCGCTGTTTACCTT GCTGATACGCATATGTACCCGTCTTCTCATCAGCATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGAGACA GCAGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACCAAATACAAGCTCCACAGCATGCGCTGGGGT CTGATTCCCTTCTGGACGAAACGCAATCCCGACTACGGAAGTATTATGCGCACAATCAACTGCCGAGATGACTCA CTAATCGAGGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAGCGGTGCGTGGTGGTGTGTCAGGGGTTCTAT GAGTGGTTGAAGAAAGGACCAGGGGGGAAAGAGAAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTTGATG TATTTTGCGGGGTTGTGGGATAGTGTTAAGTATGAAGATTCGGATGATTATCTCTACACATATACGATCATCACG ACATCTTCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGATTCTGGACCCGAATAGCGAGCAGATG AAGACTTGGCTGGACCCCTCTAGGACGGAGTGGTCGAAAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAG CTGGAGTGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTCTCCTGATTTTATAGTTCCGGTTAGT AGTAAGGAGAATAAGAGCAATATTGCGAACTTTCTTGCCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAA GGAGTGAAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAATGCCCCCAAGCCGGTTTCTGGAGTC AAGAGGGAACATTCGCCTGGTGTCGAGACGGAAGATACTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCG CCGAAGAAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGCAGGGAAGAAGACGCGCAGTGCCACG CATAATAAGCCGATGAAGAAGAGTCCGCAGAAGCAGCCCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGG AAGTAA |
| Transcript | >Ani_SJS100_1|g5600.t1 ATGTGTGGACGATACGCTTTAGGCGTGCGCATGAGCTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCAAGTC GACGACGCACCCCCCGATGAAGACGTCCGCGAAACCTACAACTTCGCTCCAGGGAACAGCGGCGCTGTTTACCTT GCTGATACGCATATGTACCCGTCTTCTCATCAGCATGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGAGACA GCAGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAGCAATGCCACCAAATACAAGCTCCACAGCATGCGCTGGGGT CTGATTCCCTTCTGGACGAAACGCAATCCCGACTACGGAAGTATTATGCGCACAATCAACTGCCGAGATGACTCA CTAATCGAGGACCGGGGCCTATGGACGTCCATGAAGCGGAGGAAGCGGTGCGTGGTGGTGTGTCAGGGGTTCTAT GAGTGGTTGAAGAAAGGACCAGGGGGGAAAGAGAAGGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTTGATG TATTTTGCGGGGTTGTGGGATAGTGTTAAGTATGAAGATTCGGATGATTATCTCTACACATATACGATCATCACG ACATCTTCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCCCGTGATTCTGGACCCGAATAGCGAGCAGATG AAGACTTGGCTGGACCCCTCTAGGACGGAGTGGTCGAAAGAGCTGCAGTCGATCCTCAAGCCATATGAGGGCGAG CTGGAGTGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAATAATTCTCCTGATTTTATAGTTCCGGTTAGT AGTAAGGAGAATAAGAGCAATATTGCGAACTTTCTTGCCAATGCGAAGAAGGGTGCTGCGGTGAAGGTGGAAGAA GGAGTGAAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGAGGATAATGCCCCCAAGCCGGTTTCTGGAGTC AAGAGGGAACATTCGCCTGGTGTCGAGACGGAAGATACTAAGTTGCAGAAAACGGAGCCGAGTGTAGCTTCATCG CCGAAGAAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGACGCCAGCAGGGAAGAAGACGCGCAGTGCCACG CATAATAAGCCGATGAAGAAGAGTCCGCAGAAGCAGCCCCCTGCAGGGACTCAGCGAATTACGAACTTTTTCGGG AAGTAA |
| Gene | >Ani_SJS100_1|g5600.t1 ATGTGTGGACGATACGCTTTAGGCGTGGTACGTGCCTAATCCCCCGCCCTATGTACTACTCCTGTGGTACTATAT ATCACGACCAACACCCCACACAACCAGTATGAACTGAAGTGGTACTAACACTGGAACAAACAAAAAGCGCATGAG CTTCATCCGCCGCCGTCTCCAAGACCAAGGCCTCCAAGTCGACGACGCACCCCCCGATGAAGACGTCCGCGAAAC CTACAACTTCGCTCCAGGGAACAGCGGCGCTGTTTACCTTGCTGATACGCATATGTACCCGTCTTCTCATCAGCA TGATGAGCCAGCTAGTCAACCTGACACCGAAAAAGAGACAGCAGAAGGAGAGGAAACAGGGGGAGAAAAGAAGAG CAATGCCACCAAATACAAGCTCCACAGCATGCGCTGGGGTCTGATTCCCTTCTGGACGAAACGCAATCCCGACTA CGGAAGTATTATGCGCACAATCAACTGCCGAGATGACTCACTAATCGAGGACCGGGGCCTATGGACGTCCATGAA GCGGAGGAAGCGGTGCGTGGTGGTGTGTCAGGGGTTCTATGAGTGGTTGAAGAAAGGACCAGGGGGGAAAGAGAA GGTTCCGCATTTCGTGAAGAGGAAGGATGGCGATTTGATGTATTTTGCGGGGTTGTGGGATAGTGTTAAGTATGA AGGTGGGCTTATACATTCTTTATACTTCTGAGGGAATGTTTGGGGCTGGGAGCTAATTGCAGTATCAGATTCGGA TGATTATCTCTACACATATACGATCATCACGACATCTTCGAATTCCTACTTGAAGTTCCTGCATGATCGGATGCC CGTGATTCTGGACCCGAATAGCGAGCAGATGAAGACTTGGCTGGACCCCTCTAGGACGGAGTGGTCGAAAGAGCT GCAGTCGATCCTCAAGCCATATGAGGGCGAGCTGGAGTGTTATCCTGTGCCGAAAGAGGTGGGGAAGGTGGGAAA TAATTCTCCTGATTTTATAGTTCCGGTTAGTAGTAAGGAGAATAAGAGCAATATTGCGAACTTTCTTGCCAATGC GAAGAAGGGTGCTGCGGTGAAGGTGGAAGAAGGAGTGAAGGATGAGAGGCCCACGAAAGATGCTGAATGGAGCGA GGATAATGCCCCCAAGCCGGTTTCTGGAGTCAAGAGGGAACATTCGCCTGGTGTCGAGACGGAAGATACTAAGTT GCAGAAAACGGAGCCGAGTGTAGCTTCATCGCCGAAGAAGAGCCCGGAGATGAGTTCACCATCTAAGCCTGAGAC GCCAGCAGGGAAGAAGACGCGCAGTGCCACGCATAATAAGCCGATGAAGAAGAGTCCGCAGAAGCAGCCCCCTGC AGGGACTCAGCGAATTACGAACTTTTTCGGGAAGTAA |