Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5597.t1
Gene name
Locationscaffold_032:40838..41835
Strand+
Gene length (bp)997
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01105 EMP24_GP25L emp24/gp25L/p24 family/GOLD 2.1E-41 33 213

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

Domain # Start End Length
1 186 208 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5597.t1
MAATRLTMRSFLGLLFLLFVQLTSALKFDLSAVSGKNERCIRNFVFKDQLVVVTAIVSGNKGDGQVVNMHIKDAL
GNDHGRPKDIAGETRQAFTSPADTAFDVCFDNQLTTRHAVANPYKSIELDVDIGADARDWSSIQVQEKLKPVETD
LRRIEEMVAEIVSEMEYLRAREQKLRDTNESTNERVKWFAFGTMGMLVGLGAWQVVYLRAYFRSKHLI*
Coding >Ani_SJS100_1|g5597.t1
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCC
CTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTG
GGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACTGCT
TTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGAT
GTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGAC
CTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTG
CGTGATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTG
GGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCAAGCACCTTATCTAG
Transcript >Ani_SJS100_1|g5597.t1
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCC
CTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAACATGCATATCAAGGATGCGCTG
GGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCTCCCGCCGATACTGCT
TTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGAT
GTCGACATTGGTGCCGATGCCCGTGACTGGTCTAGCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGAC
CTCCGCCGTATCGAAGAGATGGTGGCCGAGATTGTCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTG
CGTGATACCAACGAGAGCACGAACGAGCGTGTGAAGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTG
GGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACTTCAGATCCAAGCACCTTATCTAG
Gene >Ani_SJS100_1|g5597.t1
ATGGCGGCCACCCGTCTCACAATGAGGTCTTTCCTCGGTCTTCTCTTCCTCCTGTTCGTCCAACTCACCTCCGCC
CTGAAGTTCGACCTCTCTGCTGTGAGCGGGAAGAACGAGCGATGTATACGCAACTTCGTTTTCAAGGACCAGCTT
GTGGTCGTCACCGCCATTGTGAGCGGAAACAAGGGTGATGGCCAGGTTGTTAACATGCATGTATGTGGGAACTCA
CTCCATCGTCTTTTATGGTGATTGCGGGAGGCACGCTGGTCGGGCCAGCTGTTGTGTTGTCCTCCGGTGTTCGAT
TCTATCTTGAGCTTCTGTCGCTCGCGAAGGAAAAGGATGTACTTGGGCTAACTAGCTTTCTCTTTTCTGAAATAG
ATCAAGGATGCGCTGGGCAATGACCACGGTCGTCCTAAGGACATTGCCGGAGAGACTCGTCAGGCCTTCACTTCT
CCCGCCGATACTGCTTTCGACGTTTGCTTTGACAACCAGCTTACCACTCGTCGTATGTTTATCTACCTTGATCAT
GTTGTATCTTGATATATCAGGGATATCAGGTGCTGTGTGATGTGCGTGTGTATGTGGTACTAACCAGACGCCAAA
TAGACGCCGTTGCCAACCCCTACAAGTCCATCGAGCTCGATGTCGACATTGGTGCCGATGCCCGTGACTGGTCTA
GCATTCAGGTTCAGGAGAAGCTCAAGCCTGTTGAGACCGACCTCCGCCGTATCGAAGAGATGGTGGCCGAGATTG
TCAGCGAGATGGAGTACCTGCGCGCTCGTGAGCAGAAGCTGCGTGATACCAACGAGAGCACGAACGAGCGTGTGA
AGTGGTTCGCTTTCGGTACTATGGGTATGCTGGTTGGATTGGGTGCTTGGCAGGTCGTGTATCTGAGGGCTTACT
TCAGGTATGTTCTTTTCTATCGCTCCTTCCGTTGGGTCTGGTATCTGGGTAATGTGGCTAACAGCTTTGGATTTG
TAGATCCAAGCACCTTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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