Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5565.t1
Gene name
Locationscaffold_031:298726..299896
Strand-
Gene length (bp)1170
Transcript length (bp)1107
Coding sequence length (bp)1107
Protein length (aa) 369

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04055 Radical_SAM Radical SAM superfamily 5.1E-07 120 289

GO

GO Term Description Terminal node
GO:0051536 iron-sulfur cluster binding Yes
GO:0003824 catalytic activity Yes
GO:0051540 metal cluster binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5565.t1
MPSLLHSLRTSPLLRSKPPPLNPISYMYTSKRHLGIPPAYLLDDYIPRYQLLSSIDASKKRSLAYAHLQNCNLCP
RRCGVNRYHETGMCMIGAETAKVNTIAPHRGEEPCIQGFHGSGSVFFSGCNMRCVFCQNHDIAHKKAGHDLTPTE
LAEWYMKLQTVGNVHNINLVTPEHVVPQVVLSILDARDMGLNIPIVYNTSSFDSLDSLHLLDGLVDIYLPDFKVW
KGSTAKRLLKAEEYVETAKESIKEMHRQVGDLSFTSDGIAKKGVLLRHLVMPGLEDEGREIVRWLAENVSRDLYV
HVMEQYRPDAYVGRRKRGRSGEEENGEVRYKEINRAVREEEWGGVREAAVQAGLWRFCEVNEMGGFHL*
Coding >Ani_SJS100_1|g5565.t1
ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA
TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA
CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG
CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC
ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC
AATATGCGGTGTGTGTTTTGTCAGAATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAG
CTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTC
GTCCCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCC
AGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGG
AAGGGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATG
CATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTG
ATGCCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTG
CATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAAT
GGGGAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTG
CAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG
Transcript >Ani_SJS100_1|g5565.t1
ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA
TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA
CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG
CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC
ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC
AATATGCGGTGTGTGTTTTGTCAGAATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAG
CTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTC
GTCCCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCC
AGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGG
AAGGGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATG
CATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTG
ATGCCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTG
CATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAAT
GGGGAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTG
CAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG
Gene >Ani_SJS100_1|g5565.t1
ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA
TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA
CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG
CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC
ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC
AATATGCGGTGTGTGTTTTGTCAGAATCATGTGCGTATACACCCCCCCACCCCTGGGTTTAGATAATTGTAGTGG
GTTGACAGTTGTGGACAGGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAGCTAGCGGAGTGG
TACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTCGTCCCGCAAGTC
GTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCCAGCTTCGACTCC
CTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGGAAGGGGAGTACC
GCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATGCATCGGCAGGTA
GGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTGATGCCGGGGTTG
GAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTGCATGTTATGGAG
CAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAATGGGGAGGTCAGG
TATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTGCAGGCGGGGTTG
TGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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