Protein ID | Ani_SJS100_1|g5565.t1 |
Gene name | |
Location | scaffold_031:298726..299896 |
Strand | - |
Gene length (bp) | 1170 |
Transcript length (bp) | 1107 |
Coding sequence length (bp) | 1107 |
Protein length (aa) | 369 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04055 | Radical_SAM | Radical SAM superfamily | 5.1E-07 | 120 | 289 |
GO Term | Description | Terminal node |
---|---|---|
GO:0051536 | iron-sulfur cluster binding | Yes |
GO:0003824 | catalytic activity | Yes |
GO:0051540 | metal cluster binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 17 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5565.t1 MPSLLHSLRTSPLLRSKPPPLNPISYMYTSKRHLGIPPAYLLDDYIPRYQLLSSIDASKKRSLAYAHLQNCNLCP RRCGVNRYHETGMCMIGAETAKVNTIAPHRGEEPCIQGFHGSGSVFFSGCNMRCVFCQNHDIAHKKAGHDLTPTE LAEWYMKLQTVGNVHNINLVTPEHVVPQVVLSILDARDMGLNIPIVYNTSSFDSLDSLHLLDGLVDIYLPDFKVW KGSTAKRLLKAEEYVETAKESIKEMHRQVGDLSFTSDGIAKKGVLLRHLVMPGLEDEGREIVRWLAENVSRDLYV HVMEQYRPDAYVGRRKRGRSGEEENGEVRYKEINRAVREEEWGGVREAAVQAGLWRFCEVNEMGGFHL* |
Coding | >Ani_SJS100_1|g5565.t1 ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC AATATGCGGTGTGTGTTTTGTCAGAATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAG CTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTC GTCCCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCC AGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGG AAGGGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATG CATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTG ATGCCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTG CATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAAT GGGGAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTG CAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG |
Transcript | >Ani_SJS100_1|g5565.t1 ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC AATATGCGGTGTGTGTTTTGTCAGAATCATGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAG CTAGCGGAGTGGTACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTC GTCCCGCAAGTCGTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCC AGCTTCGACTCCCTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGG AAGGGGAGTACCGCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATG CATCGGCAGGTAGGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTG ATGCCGGGGTTGGAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTG CATGTTATGGAGCAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAAT GGGGAGGTCAGGTATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTG CAGGCGGGGTTGTGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG |
Gene | >Ani_SJS100_1|g5565.t1 ATGCCCTCCCTATTACACTCCCTCCGCACTTCCCCCCTCCTCCGCTCCAAACCCCCTCCCTTAAACCCCATATCA TATATGTATACATCAAAACGCCACCTCGGCATCCCCCCAGCCTACCTCCTGGACGACTACATCCCGCGCTACCAA CTCCTCTCGTCCATCGACGCCTCCAAAAAGCGCTCCCTCGCCTACGCCCACCTCCAAAACTGCAACCTCTGCCCG CGTCGCTGCGGCGTCAACCGATACCATGAAACGGGCATGTGCATGATCGGCGCCGAAACCGCAAAAGTGAACACC ATCGCCCCGCATCGCGGCGAGGAACCCTGCATCCAGGGGTTTCATGGCTCCGGCAGCGTGTTTTTCTCCGGGTGC AATATGCGGTGTGTGTTTTGTCAGAATCATGTGCGTATACACCCCCCCACCCCTGGGTTTAGATAATTGTAGTGG GTTGACAGTTGTGGACAGGATATAGCGCACAAGAAAGCAGGTCATGATCTCACGCCCACCGAGCTAGCGGAGTGG TACATGAAACTCCAGACTGTAGGGAACGTGCATAATATTAACCTCGTCACGCCAGAGCACGTCGTCCCGCAAGTC GTGCTTTCGATTCTAGACGCGAGGGATATGGGATTAAATATCCCTATCGTCTATAACACATCCAGCTTCGACTCC CTCGACTCATTACATCTGCTGGATGGGTTGGTGGATATATACCTCCCTGACTTTAAAGTCTGGAAGGGGAGTACC GCGAAGCGATTACTCAAAGCGGAAGAGTATGTCGAGACAGCGAAGGAGAGCATCAAGGAGATGCATCGGCAGGTA GGGGATTTGAGTTTCACGTCTGATGGAATTGCGAAGAAGGGAGTGTTGTTGAGACATTTGGTGATGCCGGGGTTG GAGGATGAGGGGAGGGAGATTGTGAGATGGCTGGCGGAGAATGTGTCCAGGGATTTGTATGTGCATGTTATGGAG CAGTATAGGCCGGATGCGTATGTGGGGAGGAGGAAGAGAGGGAGGAGTGGAGAGGAGGAGAATGGGGAGGTCAGG TATAAGGAGATTAATCGCGCTGTTAGGGAGGAGGAATGGGGGGGTGTTAGGGAGGCTGCGGTGCAGGCGGGGTTG TGGAGGTTTTGTGAGGTTAATGAGATGGGGGGGTTTCATCTGTAG |