© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5555.t1 |
| Gene name | |
| Location | scaffold_031:266857..267893 |
| Strand | - |
| Gene length (bp) | 1036 |
| Transcript length (bp) | 978 |
| Coding sequence length (bp) | 978 |
| Protein length (aa) | 326 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03227 | GILT | Gamma interferon inducible lysosomal thiol reductase (GILT) | 1.5E-12 | 113 | 211 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 34 | 56 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5555.t1 MEKLPTQSKADTSGYVDLSESSVARPISTRRDRVVTRLAACLGLITIAFLALSWTPISISGFKLFSCHRWRGQHD VSFPPDLGREEAPLMNGPLHELSTLDGSRLASSNRIPLEAHVMSKCPDARDCLQQLVIPAMEQISDKVDFKLSFI AAVSNKSSEIQCMHGPTECIGDMLILCAANLPFPPESGAMCSKDARTPTIRSLGFANCLISSYPDIPKRDLVQGC ALEHGIDFEALNKCASREYDDLDDDDDSDEKTPLSGIALLRQSALHSDKLNVRTSCTLRLNESTWCVRDGGVWRD CAQEGEGSKVSVLVDEVKKLWDKVN* |
| Coding | >Ani_SJS100_1|g5555.t1 ATGGAAAAACTCCCAACTCAATCCAAAGCCGACACTTCCGGCTATGTCGACCTCTCCGAGTCGTCCGTGGCGCGC CCGATCAGCACCCGTCGCGACCGGGTCGTTACTCGGCTGGCCGCATGTCTGGGGCTCATCACCATCGCCTTCCTA GCTTTATCATGGACCCCTATCTCCATTTCCGGCTTTAAGCTCTTTTCGTGCCATAGATGGAGAGGACAGCATGAT GTTTCATTTCCCCCTGACTTGGGCAGGGAGGAAGCTCCGTTGATGAATGGTCCACTGCATGAACTGTCCACCCTG GACGGGAGCCGCCTAGCCTCGAGTAACAGAATTCCCCTGGAGGCTCATGTCATGAGTAAATGCCCCGACGCTCGG GATTGTCTCCAACAGCTTGTCATTCCTGCTATGGAGCAGATCAGCGATAAAGTCGACTTCAAGCTGTCTTTCATC GCCGCAGTATCCAACAAGTCATCAGAGATCCAATGCATGCACGGTCCCACCGAATGCATCGGTGACATGCTCATC CTCTGTGCAGCTAATCTGCCTTTCCCGCCTGAGTCCGGTGCCATGTGCTCCAAGGATGCTCGTACTCCAACAATC CGGTCGCTTGGGTTCGCCAACTGCCTTATCAGCTCGTATCCCGACATTCCGAAGCGCGACCTGGTTCAGGGATGT GCCTTGGAGCATGGTATCGACTTTGAGGCTCTTAACAAGTGTGCCAGTCGAGAATATGATGACCTTGACGACGAT GATGATAGCGACGAGAAGACACCGCTTAGTGGCATTGCTCTGTTGCGCCAGAGTGCATTACATAGCGATAAGCTC AACGTCAGGACCAGCTGTACTCTGCGCCTGAATGAATCTACCTGGTGCGTTCGGGATGGTGGAGTCTGGCGGGAC TGCGCCCAGGAAGGAGAGGGCAGCAAGGTCTCGGTGCTTGTGGACGAGGTGAAGAAGCTGTGGGACAAGGTCAAC TAA |
| Transcript | >Ani_SJS100_1|g5555.t1 ATGGAAAAACTCCCAACTCAATCCAAAGCCGACACTTCCGGCTATGTCGACCTCTCCGAGTCGTCCGTGGCGCGC CCGATCAGCACCCGTCGCGACCGGGTCGTTACTCGGCTGGCCGCATGTCTGGGGCTCATCACCATCGCCTTCCTA GCTTTATCATGGACCCCTATCTCCATTTCCGGCTTTAAGCTCTTTTCGTGCCATAGATGGAGAGGACAGCATGAT GTTTCATTTCCCCCTGACTTGGGCAGGGAGGAAGCTCCGTTGATGAATGGTCCACTGCATGAACTGTCCACCCTG GACGGGAGCCGCCTAGCCTCGAGTAACAGAATTCCCCTGGAGGCTCATGTCATGAGTAAATGCCCCGACGCTCGG GATTGTCTCCAACAGCTTGTCATTCCTGCTATGGAGCAGATCAGCGATAAAGTCGACTTCAAGCTGTCTTTCATC GCCGCAGTATCCAACAAGTCATCAGAGATCCAATGCATGCACGGTCCCACCGAATGCATCGGTGACATGCTCATC CTCTGTGCAGCTAATCTGCCTTTCCCGCCTGAGTCCGGTGCCATGTGCTCCAAGGATGCTCGTACTCCAACAATC CGGTCGCTTGGGTTCGCCAACTGCCTTATCAGCTCGTATCCCGACATTCCGAAGCGCGACCTGGTTCAGGGATGT GCCTTGGAGCATGGTATCGACTTTGAGGCTCTTAACAAGTGTGCCAGTCGAGAATATGATGACCTTGACGACGAT GATGATAGCGACGAGAAGACACCGCTTAGTGGCATTGCTCTGTTGCGCCAGAGTGCATTACATAGCGATAAGCTC AACGTCAGGACCAGCTGTACTCTGCGCCTGAATGAATCTACCTGGTGCGTTCGGGATGGTGGAGTCTGGCGGGAC TGCGCCCAGGAAGGAGAGGGCAGCAAGGTCTCGGTGCTTGTGGACGAGGTGAAGAAGCTGTGGGACAAGGTCAAC TAA |
| Gene | >Ani_SJS100_1|g5555.t1 ATGGAAAAACTCCCAACTCAATCCAAAGCCGACACTTCCGGCTATGTCGACCTCTCCGAGTCGTCCGTGGCGCGC CCGATCAGCACCCGTCGCGACCGGGTCGTTACTCGGCTGGCCGCATGTCTGGGGCTCATCACCATCGCCTTCCTA GCTTTATCATGGACCCCTATCTCCATTTCCGGCTTTAAGCTCTTTTCGTGCCATAGATGGAGAGGACAGCATGAT GTTTCATTTCCCCCTGACTTGGGCAGGGAGGAAGCTCCGTTGATGAATGGTCCACTGCATGAACTGTCCACCCTG GACGGGAGCCGCCTAGCCTCGAGTAACAGAATTCCCCTGGAGGCTCATGTCATGAGTAAATGCCCCGACGCTCGG GATTGTCTCCAACAGCTTGTCATTCCTGCTATGGAGCAGATCAGCGATAAAGTCGACTTCAAGCTGTCTTTCATC GCCGCGTATGTAGACTTCCTGTCCTTTCGACCTTCTAGCTCGGAAAACTGACACTGTGCCCAGAGTATCCAACAA GTCATCAGAGATCCAATGCATGCACGGTCCCACCGAATGCATCGGTGACATGCTCATCCTCTGTGCAGCTAATCT GCCTTTCCCGCCTGAGTCCGGTGCCATGTGCTCCAAGGATGCTCGTACTCCAACAATCCGGTCGCTTGGGTTCGC CAACTGCCTTATCAGCTCGTATCCCGACATTCCGAAGCGCGACCTGGTTCAGGGATGTGCCTTGGAGCATGGTAT CGACTTTGAGGCTCTTAACAAGTGTGCCAGTCGAGAATATGATGACCTTGACGACGATGATGATAGCGACGAGAA GACACCGCTTAGTGGCATTGCTCTGTTGCGCCAGAGTGCATTACATAGCGATAAGCTCAACGTCAGGACCAGCTG TACTCTGCGCCTGAATGAATCTACCTGGTGCGTTCGGGATGGTGGAGTCTGGCGGGACTGCGCCCAGGAAGGAGA GGGCAGCAAGGTCTCGGTGCTTGTGGACGAGGTGAAGAAGCTGTGGGACAAGGTCAACTAA |