Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5512.t1
Gene name
Locationscaffold_031:129167..130289
Strand+
Gene length (bp)1122
Transcript length (bp)1056
Coding sequence length (bp)1056
Protein length (aa) 352

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 67 0.5

Transmembrane Domains

Domain # Start End Length
1 42 64 22
2 131 153 22
3 177 199 22
4 214 236 22
5 292 314 22
6 324 346 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5512.t1
MAPRKKEVLSAVTAADDDTAEKTTRQLRHKTRLDRIHPAVRFILAVFGSLALSSTLFSLTTGITLGELGRVSKHL
ETWWEVGGLMAWKAVEVGLAWIMGFDGRDVLSFTYLTHLPTFSLLSTFYSLRPTTILTSYFITLLSTTLPFILLR
NLTPLHSFSDSTRIPNRSILNDRPTTIYTTIAAAAIFTVTLSLSYATPWLPTTLVTHFQDIPDVTAIHAGPAALP
GLFLSLLPAGLAARDFLFASSTGASSRNSKKNSNNKNKEGTSSPEGEYLAYTVYRKTWGTLSRKMQVLVSRTVLL
AGMLFANTVVQVAGTVNQVDAEGAMVWGAVWAIAAGVTGAMFGWIEAVDGV*
Coding >Ani_SJS100_1|g5512.t1
ATGGCTCCCCGCAAGAAAGAAGTCCTCTCCGCGGTAACAGCAGCCGACGATGACACCGCCGAGAAGACGACGCGC
CAACTGCGTCACAAGACGCGCCTGGACCGCATCCACCCCGCCGTGCGCTTCATCCTCGCCGTGTTCGGCAGCTTG
GCATTGAGCTCGACGCTTTTCTCCCTGACGACGGGGATCACACTCGGCGAACTAGGCCGTGTGAGCAAACACCTC
GAGACATGGTGGGAAGTAGGAGGTCTGATGGCCTGGAAGGCCGTCGAGGTCGGACTTGCCTGGATCATGGGCTTT
GACGGCCGCGACGTCCTCTCCTTCACCTACCTCACCCACCTACCCACCTTCAGCCTCCTTTCGACCTTCTACAGC
CTGCGCCCAACCACGATCCTTACCAGCTACTTCATTACTCTCCTCTCCACCACTCTCCCCTTCATCCTCCTCCGC
AACCTCACCCCCCTCCACTCCTTCTCGGATTCCACGCGCATTCCTAACCGCTCCATCCTCAACGACCGCCCGACA
ACCATCTACACCACCATCGCCGCGGCTGCCATCTTCACCGTTACCCTCTCCCTCAGCTACGCCACGCCCTGGCTC
CCCACCACCCTCGTCACCCACTTCCAAGACATCCCCGACGTCACCGCCATCCATGCCGGTCCCGCCGCTCTCCCC
GGCCTATTCCTTTCCCTCCTTCCCGCTGGCTTGGCGGCGCGCGATTTCCTCTTCGCCAGCTCAACGGGTGCATCC
TCCAGAAACTCCAAGAAGAATAGCAACAACAAAAACAAGGAGGGGACATCCAGCCCCGAAGGCGAGTACCTGGCC
TACACCGTCTACCGCAAAACATGGGGAACCCTGTCCCGCAAGATGCAAGTGCTAGTCTCCCGCACAGTCCTACTG
GCAGGCATGTTGTTCGCGAACACAGTCGTGCAGGTCGCAGGGACAGTGAACCAGGTGGACGCCGAAGGCGCAATG
GTCTGGGGTGCGGTGTGGGCTATCGCGGCGGGTGTTACGGGCGCAATGTTTGGATGGATTGAGGCCGTGGATGGA
GTATAG
Transcript >Ani_SJS100_1|g5512.t1
ATGGCTCCCCGCAAGAAAGAAGTCCTCTCCGCGGTAACAGCAGCCGACGATGACACCGCCGAGAAGACGACGCGC
CAACTGCGTCACAAGACGCGCCTGGACCGCATCCACCCCGCCGTGCGCTTCATCCTCGCCGTGTTCGGCAGCTTG
GCATTGAGCTCGACGCTTTTCTCCCTGACGACGGGGATCACACTCGGCGAACTAGGCCGTGTGAGCAAACACCTC
GAGACATGGTGGGAAGTAGGAGGTCTGATGGCCTGGAAGGCCGTCGAGGTCGGACTTGCCTGGATCATGGGCTTT
GACGGCCGCGACGTCCTCTCCTTCACCTACCTCACCCACCTACCCACCTTCAGCCTCCTTTCGACCTTCTACAGC
CTGCGCCCAACCACGATCCTTACCAGCTACTTCATTACTCTCCTCTCCACCACTCTCCCCTTCATCCTCCTCCGC
AACCTCACCCCCCTCCACTCCTTCTCGGATTCCACGCGCATTCCTAACCGCTCCATCCTCAACGACCGCCCGACA
ACCATCTACACCACCATCGCCGCGGCTGCCATCTTCACCGTTACCCTCTCCCTCAGCTACGCCACGCCCTGGCTC
CCCACCACCCTCGTCACCCACTTCCAAGACATCCCCGACGTCACCGCCATCCATGCCGGTCCCGCCGCTCTCCCC
GGCCTATTCCTTTCCCTCCTTCCCGCTGGCTTGGCGGCGCGCGATTTCCTCTTCGCCAGCTCAACGGGTGCATCC
TCCAGAAACTCCAAGAAGAATAGCAACAACAAAAACAAGGAGGGGACATCCAGCCCCGAAGGCGAGTACCTGGCC
TACACCGTCTACCGCAAAACATGGGGAACCCTGTCCCGCAAGATGCAAGTGCTAGTCTCCCGCACAGTCCTACTG
GCAGGCATGTTGTTCGCGAACACAGTCGTGCAGGTCGCAGGGACAGTGAACCAGGTGGACGCCGAAGGCGCAATG
GTCTGGGGTGCGGTGTGGGCTATCGCGGCGGGTGTTACGGGCGCAATGTTTGGATGGATTGAGGCCGTGGATGGA
GTATAG
Gene >Ani_SJS100_1|g5512.t1
ATGGCTCCCCGCAAGAAAGAAGTCCTCTCCGCGGTAACAGCAGCCGACGATGACACCGCCGAGAAGACGACGCGC
CAACTGCGTCACAAGACGCGCCTGGACCGCATCCACCCCGCCGTGCGCTTCATCCTCGCCGTGTTCGGCAGCTTG
GCATTGAGCTCGACGCTTTTCTCCCTGACGACGGGGATCACACTCGGCGAACTAGGCCGTGTGAGCAAACACCTC
GAGACATGGTGGGAAGTAGGAGGTCTGATGGCCTGGAAGGCCGTCGAGGTCGGACTTGCCTGGATCATGGGCTTT
GACGGTATTCCGTTATCCCCGTTTAAACCCCATATAATCATTAGCGAAAACTAATACATTGAATCTCAAGGCCGC
GACGTCCTCTCCTTCACCTACCTCACCCACCTACCCACCTTCAGCCTCCTTTCGACCTTCTACAGCCTGCGCCCA
ACCACGATCCTTACCAGCTACTTCATTACTCTCCTCTCCACCACTCTCCCCTTCATCCTCCTCCGCAACCTCACC
CCCCTCCACTCCTTCTCGGATTCCACGCGCATTCCTAACCGCTCCATCCTCAACGACCGCCCGACAACCATCTAC
ACCACCATCGCCGCGGCTGCCATCTTCACCGTTACCCTCTCCCTCAGCTACGCCACGCCCTGGCTCCCCACCACC
CTCGTCACCCACTTCCAAGACATCCCCGACGTCACCGCCATCCATGCCGGTCCCGCCGCTCTCCCCGGCCTATTC
CTTTCCCTCCTTCCCGCTGGCTTGGCGGCGCGCGATTTCCTCTTCGCCAGCTCAACGGGTGCATCCTCCAGAAAC
TCCAAGAAGAATAGCAACAACAAAAACAAGGAGGGGACATCCAGCCCCGAAGGCGAGTACCTGGCCTACACCGTC
TACCGCAAAACATGGGGAACCCTGTCCCGCAAGATGCAAGTGCTAGTCTCCCGCACAGTCCTACTGGCAGGCATG
TTGTTCGCGAACACAGTCGTGCAGGTCGCAGGGACAGTGAACCAGGTGGACGCCGAAGGCGCAATGGTCTGGGGT
GCGGTGTGGGCTATCGCGGCGGGTGTTACGGGCGCAATGTTTGGATGGATTGAGGCCGTGGATGGAGTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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