© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5502.t1 |
| Gene name | |
| Location | scaffold_031:94129..96415 |
| Strand | - |
| Gene length (bp) | 2286 |
| Transcript length (bp) | 2013 |
| Coding sequence length (bp) | 2013 |
| Protein length (aa) | 671 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00955 | HCO3_cotransp | HCO3- transporter family | 1.5E-45 | 90 | 253 |
| PF00955 | HCO3_cotransp | HCO3- transporter family | 4.8E-39 | 264 | 528 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0006820 | anion transport | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0006811 | ion transport | No |
| GO:0006810 | transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 46 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 115 | 137 | 22 |
| 2 | 154 | 176 | 22 |
| 3 | 196 | 218 | 22 |
| 4 | 231 | 253 | 22 |
| 5 | 268 | 290 | 22 |
| 6 | 297 | 319 | 22 |
| 7 | 350 | 369 | 19 |
| 8 | 395 | 417 | 22 |
| 9 | 472 | 494 | 22 |
| 10 | 529 | 548 | 19 |
| 11 | 552 | 574 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5502.t1 MQGPTASTSGSHSGGGGGVGETLPPSSSHSRRPWQSQSQSQHLRPTSSIRSQHSTHVHHHRYQSSVVGSGAGNAA PSGNEKDEKWYKIHLFRGMIQDVKRRAPFYWSDWTDAWDYRVVPATVYMYFANILPALAFSLDMFEKTNQSYGVN EVLLASVLAAVVFSVFAAQPLVIVGVTGPITVFNYTVYDIISPRGTNYLAFMCWIGIWSLIMHWLLAITNACNGL TYVTRFSCDIFGFYVAFIYLQKGIQVLTRQWGTAGETSAYLSIMVALLVLMSGWICGELGNSSLFKRWVRKFLED YGTPLTIVFFTGFVHIGHMRDVEVARLPTSKAFFPTEERPWLVHFWDINVGDVFLAIPFAVLLTILFYFDHNVSS LIAQGTEFPLRKPAGFHWDLWLLGITTFVAGLLGIPFPNGLIPQAPFHTAALCVTRDVADEDDTNKGKAIRVTDH VVEQRVSNFAQGLMTLGTMTGPLLIVLHLIPQAVLAGLFFIMGVQALQGNGITQKLIFLAQDSGLTPASNPLKRI KRRLSIWVFVILELIGFGATFAITQTIAAIGFPVIILLLIPVRSFLFPWWFTQEELSVLDAPTASPFTMESVGGT HGLSDAATAAASGRDEDHRDSKNGGGGNGVMMRRDESSSESAVEDDLERGEAYEMQRLGVRRRSTTGGVE* |
| Coding | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAATATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACCAATCAGAGTTATGGCGTTAAT GAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTGGGT GTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTGGCG TTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTC ACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAG GTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTT ATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGAT TATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCG AGGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTC GGCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGTCTCGTCT CTTATCGCCCAAGGAACCGAGTTCCCTCTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATC ACCACCTTCGTGGCCGGACTCCTGGGTATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCC GCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCAC GTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATT GTCCTGCACCTAATTCCCCAAGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAAC GGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATC AAACGCCGACTCTCCATCTGGGTGTTCGTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAG ACTATTGCTGCCATTGGCTTCCCGGTTATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGG TTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACC CACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGT GGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGC GAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
| Transcript | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAATATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACCAATCAGAGTTATGGCGTTAAT GAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTGGGT GTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTGGCG TTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTC ACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAG GTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTT ATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGAT TATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCG AGGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTC GGCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGTCTCGTCT CTTATCGCCCAAGGAACCGAGTTCCCTCTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATC ACCACCTTCGTGGCCGGACTCCTGGGTATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCC GCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCAC GTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATT GTCCTGCACCTAATTCCCCAAGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAAC GGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATC AAACGCCGACTCTCCATCTGGGTGTTCGTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAG ACTATTGCTGCCATTGGCTTCCCGGTTATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGG TTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACC CACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGT GGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGC GAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
| Gene | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAAGTGGGTGAACCCTTATCCTTTCTTTTCTTTTGGTGTTGGTTGTGTTTATTTGGGATTTGGTTTGGGA AGGGGGAGAAAGTGTGCTGATTCGGGCTGTGTAGTATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAA AAACCAATCAGAGTTATGGCGTTAATGAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTG CGGCGCAGCCGTTGGTTATTGTGGGTGTTACTGGTATGTTTTACTTTCTCTCCCTCTCTCTATTTCATTTGCTGG TGGAGTGTATGTTGATTGGTTGGTAAGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCC GGGGAACGAATTATTTGGCGTTTATGTGCTGGATTGGGATGTGAGTCTTCTTTCCGCGTTCTCTCTTTGGCAGCT CTCGTACTGATCATTGTAGATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTCA CCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAGG TCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTTA TGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGATT ATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCGA GGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTCG GCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGGTAAGTTAA CATTCAGGATAAAAACATACTCGGTTGACTGACCATATAGTCTCGTCTCTTATCGCCCAAGGAACCGAGTTCCCT CTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATCACCACCTTCGTGGCCGGACTCCTGGGT ATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCCGCTCTCTGCGTCACCCGCGACGTCGCC GACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCACGTCGTCGAGCAACGCGTCAGCAACTTC GCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATTGTCCTGCACCTAATTCCCCAAGCCGTC CTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAACGGCATCACCCAGAAACTCATCTTCCTC GCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATCAAACGCCGACTCTCCATCTGGGTGTTC GTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAGACTATTGCTGCCATTGGCTTCCCGGTT ATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGGTTTACGCAGGAGGAACTGTCCGTTCTG GATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACCCACGGGCTGAGTGATGCTGCTACTGCT GCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGTGGAGGTAATGGGGTTATGATGCGTCGG GATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGCGAGGCGTATGAGATGCAGAGGTTGGGT GTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |