Protein ID | Ani_SJS100_1|g5502.t1 |
Gene name | |
Location | scaffold_031:94129..96415 |
Strand | - |
Gene length (bp) | 2286 |
Transcript length (bp) | 2013 |
Coding sequence length (bp) | 2013 |
Protein length (aa) | 671 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00955 | HCO3_cotransp | HCO3- transporter family | 1.5E-45 | 90 | 253 |
PF00955 | HCO3_cotransp | HCO3- transporter family | 4.8E-39 | 264 | 528 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016021 | integral component of membrane | Yes |
GO:0006820 | anion transport | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0008150 | biological_process | No |
GO:0005575 | cellular_component | No |
GO:0031224 | intrinsic component of membrane | No |
GO:0051234 | establishment of localization | No |
GO:0051179 | localization | No |
GO:0006811 | ion transport | No |
GO:0006810 | transport | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 46 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 115 | 137 | 22 |
2 | 154 | 176 | 22 |
3 | 196 | 218 | 22 |
4 | 231 | 253 | 22 |
5 | 268 | 290 | 22 |
6 | 297 | 319 | 22 |
7 | 350 | 369 | 19 |
8 | 395 | 417 | 22 |
9 | 472 | 494 | 22 |
10 | 529 | 548 | 19 |
11 | 552 | 574 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5502.t1 MQGPTASTSGSHSGGGGGVGETLPPSSSHSRRPWQSQSQSQHLRPTSSIRSQHSTHVHHHRYQSSVVGSGAGNAA PSGNEKDEKWYKIHLFRGMIQDVKRRAPFYWSDWTDAWDYRVVPATVYMYFANILPALAFSLDMFEKTNQSYGVN EVLLASVLAAVVFSVFAAQPLVIVGVTGPITVFNYTVYDIISPRGTNYLAFMCWIGIWSLIMHWLLAITNACNGL TYVTRFSCDIFGFYVAFIYLQKGIQVLTRQWGTAGETSAYLSIMVALLVLMSGWICGELGNSSLFKRWVRKFLED YGTPLTIVFFTGFVHIGHMRDVEVARLPTSKAFFPTEERPWLVHFWDINVGDVFLAIPFAVLLTILFYFDHNVSS LIAQGTEFPLRKPAGFHWDLWLLGITTFVAGLLGIPFPNGLIPQAPFHTAALCVTRDVADEDDTNKGKAIRVTDH VVEQRVSNFAQGLMTLGTMTGPLLIVLHLIPQAVLAGLFFIMGVQALQGNGITQKLIFLAQDSGLTPASNPLKRI KRRLSIWVFVILELIGFGATFAITQTIAAIGFPVIILLLIPVRSFLFPWWFTQEELSVLDAPTASPFTMESVGGT HGLSDAATAAASGRDEDHRDSKNGGGGNGVMMRRDESSSESAVEDDLERGEAYEMQRLGVRRRSTTGGVE* |
Coding | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAATATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACCAATCAGAGTTATGGCGTTAAT GAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTGGGT GTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTGGCG TTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTC ACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAG GTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTT ATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGAT TATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCG AGGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTC GGCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGTCTCGTCT CTTATCGCCCAAGGAACCGAGTTCCCTCTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATC ACCACCTTCGTGGCCGGACTCCTGGGTATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCC GCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCAC GTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATT GTCCTGCACCTAATTCCCCAAGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAAC GGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATC AAACGCCGACTCTCCATCTGGGTGTTCGTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAG ACTATTGCTGCCATTGGCTTCCCGGTTATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGG TTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACC CACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGT GGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGC GAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
Transcript | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAATATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAAAAACCAATCAGAGTTATGGCGTTAAT GAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTGCGGCGCAGCCGTTGGTTATTGTGGGT GTTACTGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCCGGGGAACGAATTATTTGGCG TTTATGTGCTGGATTGGGATATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTC ACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAG GTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTT ATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGAT TATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCG AGGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTC GGCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGTCTCGTCT CTTATCGCCCAAGGAACCGAGTTCCCTCTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATC ACCACCTTCGTGGCCGGACTCCTGGGTATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCC GCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCAC GTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATT GTCCTGCACCTAATTCCCCAAGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAAC GGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATC AAACGCCGACTCTCCATCTGGGTGTTCGTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAG ACTATTGCTGCCATTGGCTTCCCGGTTATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGG TTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACC CACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGT GGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGC GAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |
Gene | >Ani_SJS100_1|g5502.t1 ATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGGCGGAGGAGTAGGAGAAACCCTCCCACCG TCATCTTCGCATTCGCGCCGGCCGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATCCGC TCTCAGCACAGTACACACGTCCATCACCACAGGTATCAATCATCCGTTGTTGGTAGCGGTGCTGGTAATGCAGCT CCCTCCGGGAATGAGAAGGATGAGAAATGGTACAAAATCCATCTCTTTCGCGGCATGATTCAGGATGTGAAGCGA AGGGCTCCGTTCTATTGGAGTGATTGGACCGATGCGTGGGATTATCGCGTTGTGCCCGCCACGGTGTATATGTAT TTTGCTAAGTGGGTGAACCCTTATCCTTTCTTTTCTTTTGGTGTTGGTTGTGTTTATTTGGGATTTGGTTTGGGA AGGGGGAGAAAGTGTGCTGATTCGGGCTGTGTAGTATCCTGCCTGCGCTGGCTTTCTCGTTGGATATGTTTGAAA AAACCAATCAGAGTTATGGCGTTAATGAGGTCCTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCTTTG CGGCGCAGCCGTTGGTTATTGTGGGTGTTACTGGTATGTTTTACTTTCTCTCCCTCTCTCTATTTCATTTGCTGG TGGAGTGTATGTTGATTGGTTGGTAAGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGCCCC GGGGAACGAATTATTTGGCGTTTATGTGCTGGATTGGGATGTGAGTCTTCTTTCCGCGTTCTCTCTTTGGCAGCT CTCGTACTGATCATTGTAGATGGTCGTTGATTATGCATTGGCTGCTTGCCATAACCAATGCCTGTAATGGTCTCA CCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAGG TCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTTA TGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGATT ATGGCACTCCCTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCGA GGCTGCCCACGAGCAAAGCGTTCTTCCCAACAGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTCG GCGACGTGTTCCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTCTGTTCTATTTTGACCATAATGGTAAGTTAA CATTCAGGATAAAAACATACTCGGTTGACTGACCATATAGTCTCGTCTCTTATCGCCCAAGGAACCGAGTTCCCT CTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTGGCTGCTGGGAATCACCACCTTCGTGGCCGGACTCCTGGGT ATCCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCCGCTCTCTGCGTCACCCGCGACGTCGCC GACGAAGACGACACCAACAAAGGCAAAGCCATCCGCGTCACCGACCACGTCGTCGAGCAACGCGTCAGCAACTTC GCCCAAGGCCTCATGACCCTGGGAACCATGACCGGCCCTCTGCTTATTGTCCTGCACCTAATTCCCCAAGCCGTC CTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGCTCTTCAAGGCAACGGCATCACCCAGAAACTCATCTTCCTC GCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATCAAACGCCGACTCTCCATCTGGGTGTTC GTTATTCTGGAGCTGATCGGCTTCGGGGCCACCTTTGCCATTACCCAGACTATTGCTGCCATTGGCTTCCCGGTT ATCATTTTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGGTTTACGCAGGAGGAACTGTCCGTTCTG GATGCCCCGACTGCTAGTCCATTCACTATGGAGAGCGTGGGCGGGACCCACGGGCTGAGTGATGCTGCTACTGCT GCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGTGGAGGTAATGGGGTTATGATGCGTCGG GATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGATTTGGAGAGAGGCGAGGCGTATGAGATGCAGAGGTTGGGT GTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAA |