Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5499.t1
Gene name
Locationscaffold_031:81190..82011
Strand-
Gene length (bp)821
Transcript length (bp)633
Coding sequence length (bp)633
Protein length (aa) 211

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PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 31 0.5

Transmembrane Domains

Domain # Start End Length
1 5 27 22
2 42 59 17
3 66 85 19
4 100 117 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5499.t1
MRIRYPFAGAFLFLLILAAYIGLLPHSTSSTLPSQLQPNDKFLHVVTFFLLSLIFYWIFDTTRRRTLHLTLVVCT
LVLGIGSEIVQGLLPNGRSFDAFDLLANIVGSLGAVGLCGWYHRRMLDRRRKARFGSLGGDGTENDVELGVTGHH
SDEEEGLGPQETGVMSLEQEVDNWDENAVDNWDEEDESGDLAVDTSKRTSPAEDGKKRSD*
Coding >Ani_SJS100_1|g5499.t1
ATGCGAATCCGTTACCCTTTCGCGGGCGCCTTTCTTTTCCTCCTCATCCTCGCCGCCTACATCGGCCTCCTCCCG
CACAGCACATCATCTACTCTTCCGTCCCAACTTCAACCCAATGACAAGTTCCTCCATGTCGTCACCTTCTTCCTC
CTCTCCCTCATATTCTACTGGATCTTCGACACTACCCGTCGTCGCACCCTTCACCTAACCCTCGTCGTCTGCACT
CTCGTCCTCGGCATTGGCTCCGAAATCGTCCAAGGTCTCCTTCCCAACGGCAGGTCCTTCGATGCGTTCGACCTC
CTCGCCAACATCGTCGGCAGTCTCGGCGCCGTCGGCCTTTGCGGTTGGTACCACCGGCGCATGCTTGACCGGCGA
CGCAAGGCGCGCTTCGGTTCCCTGGGCGGCGACGGCACAGAGAACGATGTCGAGCTCGGAGTGACGGGCCACCAC
AGCGACGAGGAGGAGGGTCTGGGACCCCAGGAAACAGGCGTTATGAGCCTAGAGCAGGAGGTAGATAACTGGGAT
GAGAACGCTGTCGATAATTGGGATGAGGAGGACGAGTCTGGAGATTTGGCCGTTGATACCTCGAAGAGGACGTCG
CCGGCTGAAGATGGAAAGAAGCGGAGTGATTAA
Transcript >Ani_SJS100_1|g5499.t1
ATGCGAATCCGTTACCCTTTCGCGGGCGCCTTTCTTTTCCTCCTCATCCTCGCCGCCTACATCGGCCTCCTCCCG
CACAGCACATCATCTACTCTTCCGTCCCAACTTCAACCCAATGACAAGTTCCTCCATGTCGTCACCTTCTTCCTC
CTCTCCCTCATATTCTACTGGATCTTCGACACTACCCGTCGTCGCACCCTTCACCTAACCCTCGTCGTCTGCACT
CTCGTCCTCGGCATTGGCTCCGAAATCGTCCAAGGTCTCCTTCCCAACGGCAGGTCCTTCGATGCGTTCGACCTC
CTCGCCAACATCGTCGGCAGTCTCGGCGCCGTCGGCCTTTGCGGTTGGTACCACCGGCGCATGCTTGACCGGCGA
CGCAAGGCGCGCTTCGGTTCCCTGGGCGGCGACGGCACAGAGAACGATGTCGAGCTCGGAGTGACGGGCCACCAC
AGCGACGAGGAGGAGGGTCTGGGACCCCAGGAAACAGGCGTTATGAGCCTAGAGCAGGAGGTAGATAACTGGGAT
GAGAACGCTGTCGATAATTGGGATGAGGAGGACGAGTCTGGAGATTTGGCCGTTGATACCTCGAAGAGGACGTCG
CCGGCTGAAGATGGAAAGAAGCGGAGTGATTAA
Gene >Ani_SJS100_1|g5499.t1
ATGCGAATCCGTTACCCTTTCGCGGGTATGTCTTTTCCCCCAATCCTCCCCATCCATTGAGCTCTTCTACCCGCT
TCCACCTCTTCCGAAGCCAAAGTGCAGCTCTATGATACCTAATCGTCCGATTACCTCAAGAGCTTCACCAGCTCC
CCATACCACCAACTATTACCAAAATACTTCCGTAATATGCATCGCTAACTCCACTCCCATCAGGCGCCTTTCTTT
TCCTCCTCATCCTCGCCGCCTACATCGGCCTCCTCCCGCACAGCACATCATCTACTCTTCCGTCCCAACTTCAAC
CCAATGACAAGTTCCTCCATGTCGTCACCTTCTTCCTCCTCTCCCTCATATTCTACTGGATCTTCGACACTACCC
GTCGTCGCACCCTTCACCTAACCCTCGTCGTCTGCACTCTCGTCCTCGGCATTGGCTCCGAAATCGTCCAAGGTC
TCCTTCCCAACGGCAGGTCCTTCGATGCGTTCGACCTCCTCGCCAACATCGTCGGCAGTCTCGGCGCCGTCGGCC
TTTGCGGTTGGTACCACCGGCGCATGCTTGACCGGCGACGCAAGGCGCGCTTCGGTTCCCTGGGCGGCGACGGCA
CAGAGAACGATGTCGAGCTCGGAGTGACGGGCCACCACAGCGACGAGGAGGAGGGTCTGGGACCCCAGGAAACAG
GCGTTATGAGCCTAGAGCAGGAGGTAGATAACTGGGATGAGAACGCTGTCGATAATTGGGATGAGGAGGACGAGT
CTGGAGATTTGGCCGTTGATACCTCGAAGAGGACGTCGCCGGCTGAAGATGGAAAGAAGCGGAGTGATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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