© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5469.t1 |
| Gene name | |
| Location | scaffold_030:350927..352940 |
| Strand | - |
| Gene length (bp) | 2013 |
| Transcript length (bp) | 2013 |
| Coding sequence length (bp) | 2013 |
| Protein length (aa) | 671 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00817 | IMS | impB/mucB/samB family | 7.5E-21 | 48 | 158 |
| PF00817 | IMS | impB/mucB/samB family | 4.8E-12 | 182 | 295 |
| PF18439 | zf_UBZ | Ubiquitin-Binding Zinc Finger | 4.5E-15 | 595 | 625 |
| PF11799 | IMS_C | impB/mucB/samB family C-terminal domain | 6.1E-12 | 385 | 494 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006281 | DNA repair | Yes |
| GO:0003684 | damaged DNA binding | Yes |
| GO:0006259 | DNA metabolic process | No |
| GO:0090304 | nucleic acid metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0043170 | macromolecule metabolic process | No |
| GO:0033554 | cellular response to stress | No |
| GO:0044238 | primary metabolic process | No |
| GO:0006974 | cellular response to DNA damage stimulus | No |
| GO:0003674 | molecular_function | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0009987 | cellular process | No |
| GO:0008152 | metabolic process | No |
| GO:0006950 | response to stress | No |
| GO:0003677 | DNA binding | No |
| GO:0003676 | nucleic acid binding | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0051716 | cellular response to stimulus | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0050896 | response to stimulus | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0044260 | cellular macromolecule metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5469.t1 MSRSSPEPVPSTFTSGDSLKTESRYTYRHLQLLRQSSTATPLRVIAHIDLDAFYAQCEMVRLRTPRTVPLAVRQW DSLIAINYPARSFGITRMISASEAKKLCPEIVLQHVATFREGEGGKWAYRNDAFKRMNTDKVCLDPYRAESRKIL KVMKEELSRWQRELVGGEHGAGAQSPIQHAGLEKASVDEVFIDLSSLVHGVLLQRYPELRAELQGDDRVTPLPVP PTTALEWNSEDCLVDLDENETEVDDPDWDDIAMLIGSEIVRSVRAAVWDRLQYTCSAGVAKNKMMAKLGSSCNKP NKQTIVRNRAVQRFLGGYKFTKIRMLGGKLGDQVTAMFGTEQVSDLIKVSLEQFRAKLDDDTATWLYGIIRGEDK SEVNSRTQIKSMLSAKSFRPSINSVDQADKWLSIFAADIFGRLVEDGVLEHKRRPKTVALHHRQGAQVRSRQIPI PGSVPIDEALLFELGKTLFRQVMTDGRAWPCANLSLSVGGFEDGVSKNRAIDSFLLRGEQAKSSQPKRDLVAEES SDAPQPDEKRRKLENNGIKRFFLKPPETDLQPDQNGPEPGDMETEIDEHAGSVIQAKELSPEPVETLPVGYTCSR CGSVLPEHEKGEHDDWHFAKDLADEERQASSGPQQAPVPANRPGASNARNKVNRSNRGKPEKGQTRLRFG* |
| Coding | >Ani_SJS100_1|g5469.t1 ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGATTCCTTGAAGACCGAATCACGCTAC ACCTACCGTCACCTACAGCTTCTCCGTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCACGGTGCCCTTAGCTGTACGACAATGG GACTCGCTCATTGCGATCAACTATCCGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGGAGAAGGTGGGAAATGGGCATACAGA AACGATGCGTTCAAGCGGATGAATACCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGGTGAACACGGAGCTGGTGCGCAATCT CCCATACAGCACGCTGGTCTTGAGAAAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGATCGAGTCACTCCGCTTCCTGTCCCA CCTACGACTGCGTTGGAGTGGAACTCGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTCGGTCAGGGCAGCTGTTTGGGATCGG CTCCAATACACTTGCTCTGCGGGTGTTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGGCTACAAATTTACAAAGATTAGGATG CTTGGGGGTAAACTTGGTGACCAGGTTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTATGGAATCATCCGGGGAGAAGACAAA AGTGAGGTCAATTCGCGGACCCAAATCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCGCCTTGTTGAGGATGGCGTTCTTGAG CACAAGCGCCGCCCGAAAACAGTTGCCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAACACTCTTCCGACAGGTGATGACAGAT GGACGCGCATGGCCGTGTGCCAATCTTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAAAAGGGATCTGGTGGCTGAAGAGTCG TCGGATGCTCCGCAACCTGATGAGAAACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATATGGAAACTGAAATTGATGAGCATGCA GGTTCTGTCATCCAGGCCAAGGAGCTCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCACTTTGCCAAAGACCTGGCAGATGAA GAACGACAGGCATCCAGCGGCCCTCAACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCTTAGATTTGGATAA |
| Transcript | >Ani_SJS100_1|g5469.t1 ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGATTCCTTGAAGACCGAATCACGCTAC ACCTACCGTCACCTACAGCTTCTCCGTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCACGGTGCCCTTAGCTGTACGACAATGG GACTCGCTCATTGCGATCAACTATCCGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGGAGAAGGTGGGAAATGGGCATACAGA AACGATGCGTTCAAGCGGATGAATACCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGGTGAACACGGAGCTGGTGCGCAATCT CCCATACAGCACGCTGGTCTTGAGAAAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGATCGAGTCACTCCGCTTCCTGTCCCA CCTACGACTGCGTTGGAGTGGAACTCGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTCGGTCAGGGCAGCTGTTTGGGATCGG CTCCAATACACTTGCTCTGCGGGTGTTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGGCTACAAATTTACAAAGATTAGGATG CTTGGGGGTAAACTTGGTGACCAGGTTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTATGGAATCATCCGGGGAGAAGACAAA AGTGAGGTCAATTCGCGGACCCAAATCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCGCCTTGTTGAGGATGGCGTTCTTGAG CACAAGCGCCGCCCGAAAACAGTTGCCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAACACTCTTCCGACAGGTGATGACAGAT GGACGCGCATGGCCGTGTGCCAATCTTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAAAAGGGATCTGGTGGCTGAAGAGTCG TCGGATGCTCCGCAACCTGATGAGAAACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATATGGAAACTGAAATTGATGAGCATGCA GGTTCTGTCATCCAGGCCAAGGAGCTCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCACTTTGCCAAAGACCTGGCAGATGAA GAACGACAGGCATCCAGCGGCCCTCAACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCTTAGATTTGGATAA |
| Gene | >Ani_SJS100_1|g5469.t1 ATGTCACGCTCTTCCCCGGAACCCGTCCCGTCGACTTTTACGTCCGGCGATTCCTTGAAGACCGAATCACGCTAC ACCTACCGTCACCTACAGCTTCTCCGTCAAAGTTCAACAGCAACCCCTCTGCGAGTGATCGCTCATATTGATCTC GATGCCTTCTACGCACAATGTGAAATGGTACGCCTTAGGACACCCCGCACGGTGCCCTTAGCTGTACGACAATGG GACTCGCTCATTGCGATCAACTATCCGGCACGATCCTTCGGAATAACGAGGATGATATCAGCATCAGAGGCTAAG AAGCTGTGTCCGGAGATTGTCCTACAACATGTGGCCACATTTCGGGAAGGAGAAGGTGGGAAATGGGCATACAGA AACGATGCGTTCAAGCGGATGAATACCGACAAGGTGTGTCTCGATCCATACCGGGCGGAGTCGCGCAAGATCTTG AAGGTGATGAAGGAGGAACTGTCAAGATGGCAAAGAGAGCTAGTTGGTGGTGAACACGGAGCTGGTGCGCAATCT CCCATACAGCACGCTGGTCTTGAGAAAGCTAGCGTTGACGAAGTCTTCATTGACCTGTCATCTCTCGTGCACGGT GTCCTTCTTCAGCGGTATCCCGAGCTACGAGCTGAGCTGCAAGGTGATGATCGAGTCACTCCGCTTCCTGTCCCA CCTACGACTGCGTTGGAGTGGAACTCGGAGGATTGCTTGGTCGATCTGGATGAGAATGAGACAGAAGTCGATGAT CCTGACTGGGATGACATTGCTATGCTGATTGGGTCTGAAATTGTTCGGTCGGTCAGGGCAGCTGTTTGGGATCGG CTCCAATACACTTGCTCTGCGGGTGTTGCGAAGAACAAAATGATGGCAAAACTAGGGAGTTCGTGCAACAAGCCG AACAAGCAGACTATTGTGCGGAATCGTGCTGTACAACGATTCCTCGGTGGCTACAAATTTACAAAGATTAGGATG CTTGGGGGTAAACTTGGTGACCAGGTTACTGCAATGTTTGGAACAGAACAAGTGAGTGACCTTATAAAGGTGTCG CTGGAGCAATTTCGCGCCAAATTAGATGACGATACTGCTACTTGGCTTTATGGAATCATCCGGGGAGAAGACAAA AGTGAGGTCAATTCGCGGACCCAAATCAAATCGATGCTTTCAGCCAAGTCTTTCAGGCCGAGCATAAATTCCGTT GATCAGGCAGACAAATGGCTTAGTATTTTCGCGGCCGATATCTTTGGCCGCCTTGTTGAGGATGGCGTTCTTGAG CACAAGCGCCGCCCGAAAACAGTTGCCTTGCATCACCGTCAAGGAGCTCAGGTTCGCTCCCGTCAAATCCCCATT CCCGGATCAGTACCAATCGATGAAGCATTACTCTTTGAGCTTGGCAAAACACTCTTCCGACAGGTGATGACAGAT GGACGCGCATGGCCGTGTGCCAATCTTTCCCTCAGCGTTGGTGGGTTCGAAGACGGTGTCTCGAAGAACCGGGCA ATAGACTCTTTCCTCCTTCGGGGTGAACAGGCAAAATCTTCACAACCAAAAAGGGATCTGGTGGCTGAAGAGTCG TCGGATGCTCCGCAACCTGATGAGAAACGCAGGAAACTGGAGAACAATGGCATTAAGCGCTTTTTCCTCAAGCCG CCGGAGACTGACCTACAGCCTGACCAAAATGGTCCTGAACCAGGAGATATGGAAACTGAAATTGATGAGCATGCA GGTTCTGTCATCCAGGCCAAGGAGCTCTCTCCTGAGCCGGTAGAGACGTTGCCAGTGGGTTATACCTGCAGTCGC TGCGGGAGCGTTCTACCAGAGCATGAGAAGGGCGAGCATGATGATTGGCACTTTGCCAAAGACCTGGCAGATGAA GAACGACAGGCATCCAGCGGCCCTCAACAGGCTCCAGTGCCCGCAAACAGACCCGGAGCATCTAATGCTCGTAAT AAGGTCAATCGTAGCAATCGGGGTAAACCAGAAAAGGGCCAGACTCGTCTTAGATTTGGATAA |