Protein ID | Ani_SJS100_1|g5467.t1 |
Gene name | |
Location | scaffold_030:340051..341349 |
Strand | - |
Gene length (bp) | 1298 |
Transcript length (bp) | 1017 |
Coding sequence length (bp) | 1017 |
Protein length (aa) | 339 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01822 | WSC | WSC domain | 4.1E-07 | 33 | 100 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 25 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 220 | 242 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5467.t1 MRADFLLPPLLGVIALLAWPVSVASSLTYCSSANTGSSQAANESTYQSNGLCEDHCSNYAFGILQGYDCWCSNIV PNEATNVNVSQCSQDCPGYPDDSCGTVRNSDRLYDIDIFYLVARHASLLWLDVPRMDRFSGTANKLVDSVAINCA MAASIAETSSSSETTAATTTGESVAVTTDSGVVKTVTIPAATKATSTSAADNLSSAKSDNNSGMSSGTIAGVVVG SVGGALAILALIFVLFFAKRKSRSNSPDPSVQSILLDGRQSKGSQMSFMKGMFSDNHSHTLSAGSAASRLPTFTD NRMKTDTVLYANGRRDSDVSLQDNEDYSRPVLRLTNPD* |
Coding | >Ani_SJS100_1|g5467.t1 ATGCGGGCCGACTTCCTTCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGTCGGTCGCATCC TCTCTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCGCAGGCAGCAAACGAAAGTACCTACCAGTCCAATGGT CTTTGCGAGGACCACTGCAGCAACTATGCGTTTGGAATCCTTCAAGGGTACGACTGCTGGTGCTCGAACATTGTT CCCAATGAGGCGACCAACGTGAACGTTTCGCAGTGTAGCCAGGATTGTCCTGGTTACCCCGATGATAGCTGTGGA ACCGTCCGGAACAGCGACCGTCTCTACGACATCGACATCTTCTACCTCGTCGCCAGGCATGCTAGCCTTCTATGG CTGGACGTTCCCCGCATGGACCGTTTCTCTGGCACAGCGAACAAGCTTGTTGACAGTGTTGCTATCAACTGTGCC ATGGCTGCTTCGATCGCTGAAACATCTTCATCATCTGAAACTACTGCCGCTACGACGACGGGAGAATCTGTGGCG GTCACAACCGATTCTGGTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACGTCTGCAGCG GACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAATGAGCTCGGGTACCATCGCTGGTGTCGTGGTAGGC TCCGTTGGTGGTGCACTCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCGCGGTCGAAC AGCCCAGATCCAAGTGTACAGTCCATCCTGCTGGATGGAAGACAAAGCAAAGGCTCACAGATGAGTTTTATGAAG GGCATGTTTTCCGACAATCATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACGTTTACGGAC AACCGCATGAAAACCGATACCGTTCTCTACGCGAATGGCCGCCGAGATAGCGATGTGTCACTCCAGGATAATGAA GATTATTCTCGGCCTGTGTTGCGGCTCACGAACCCCGACTAA |
Transcript | >Ani_SJS100_1|g5467.t1 ATGCGGGCCGACTTCCTTCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGTCGGTCGCATCC TCTCTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCGCAGGCAGCAAACGAAAGTACCTACCAGTCCAATGGT CTTTGCGAGGACCACTGCAGCAACTATGCGTTTGGAATCCTTCAAGGGTACGACTGCTGGTGCTCGAACATTGTT CCCAATGAGGCGACCAACGTGAACGTTTCGCAGTGTAGCCAGGATTGTCCTGGTTACCCCGATGATAGCTGTGGA ACCGTCCGGAACAGCGACCGTCTCTACGACATCGACATCTTCTACCTCGTCGCCAGGCATGCTAGCCTTCTATGG CTGGACGTTCCCCGCATGGACCGTTTCTCTGGCACAGCGAACAAGCTTGTTGACAGTGTTGCTATCAACTGTGCC ATGGCTGCTTCGATCGCTGAAACATCTTCATCATCTGAAACTACTGCCGCTACGACGACGGGAGAATCTGTGGCG GTCACAACCGATTCTGGTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACGTCTGCAGCG GACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAATGAGCTCGGGTACCATCGCTGGTGTCGTGGTAGGC TCCGTTGGTGGTGCACTCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCGCGGTCGAAC AGCCCAGATCCAAGTGTACAGTCCATCCTGCTGGATGGAAGACAAAGCAAAGGCTCACAGATGAGTTTTATGAAG GGCATGTTTTCCGACAATCATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACGTTTACGGAC AACCGCATGAAAACCGATACCGTTCTCTACGCGAATGGCCGCCGAGATAGCGATGTGTCACTCCAGGATAATGAA GATTATTCTCGGCCTGTGTTGCGGCTCACGAACCCCGACTAA |
Gene | >Ani_SJS100_1|g5467.t1 ATGCGGGCCGACTTCCTTCTTCCACCATTGCTTGGTGTGATTGCCTTGCTTGCTTGGCCTGTGTCGGTCGCATCC TCTCTTACCTATTGTTCTTCGGCAAATACAGGCTCCTCGCAGGCAGCAAGTATGTGATACTCGTGCGTTATCATC CTACGGTCACTAACCTCACGCAGACGAAAGTACCTACCAGTCCAATGGTCTTTGCGAGGACCACTGCAGCAACTA TGCGTTTGGAATCCTTCAAGGGTACGACTGCTGGTGCTCGAACATTGTTCCCAATGAGGCGACCAACGTGAACGT TTCGCAGTGTAGCCAGGATTGTCCTGGTTACCCCGATGATAGCTGTGGAAGTACTTCGAAGGGCCTTTACGGTTA CGTTGCGATCGTTGGACAACAGCCGTCCGGAACAGCGACCGTCTCTACGACATCGACATCTTCTACCTCGGTCAG TAGAGCCCTTTCCTACTCGTTCGGAGTCTTGTGGTCGTGAATTGCGCACTGCCAATGTCTCGAGTCGCCAGGCAT GCTAGCCTTCTATGGCTGGACGTTCCCCGCATGGACCGTTTCTCTGGCACAGCGAACAAGCTTGTTGACAGTGTT GCTATCAACTGTGCCATGGCTGCTTCGATCGCTGAAGTGCGCAATGACCTGCCAAGCCTCAATGCTTATGATACT GACCAGGACTGACCTTTTCTAGACATCTTCATCATCTGAAACTACTGCCGCTACGACGACGGGAGAATCTGTGGC GGTCACAACCGATTCTGGTGTGGTCAAAACGGTCACAATTCCCGCTGCCACAAAAGCAACTTCAACGTCTGCAGC GGACAACCTTTCATCCGCAAAGAGTGACAACAACTCTGGAATGAGCTCGGGTACCATCGCTGGTGTCGTGGTAGG CTCCGTTGGTGGTGCACTCGCCATCCTAGCCCTGATATTCGTGTTGTTCTTCGCGAAACGCAAATCGCGGTCGAA CAGCCCAGATCCAAGTGTACAGTCCATCCTGCTGGATGGAAGACAAAGCAAAGGCTCACAGATGAGTTTTATGAA GGGCATGTTTTCCGACAATCATAGTCATACCTTGTCTGCTGGGTCCGCTGCCAGCCGCTTGCCGACGTTTACGGA CAACCGCATGAAAACCGATACCGTTCTCTACGCGAATGGCCGCCGAGATAGCGATGTGTCACTCCAGGATAATGA AGATTATTCTCGGCCTGTGTTGCGGGTCAGTTCCCATGTTTCCGTGATGCCGATTATTCAAACGCTAACACGTGA CGCAGCTCACGAACCCCGACTAA |