Protein ID | Ani_SJS100_1|g5459.t1 |
Gene name | |
Location | scaffold_030:317982..320031 |
Strand | + |
Gene length (bp) | 2049 |
Transcript length (bp) | 1113 |
Coding sequence length (bp) | 1113 |
Protein length (aa) | 371 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01490 | Aa_trans | Transmembrane amino acid transporter protein | 2.1E-19 | 51 | 339 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 70 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 59 | 78 | 19 |
2 | 88 | 110 | 22 |
3 | 131 | 153 | 22 |
4 | 163 | 182 | 19 |
5 | 189 | 211 | 22 |
6 | 239 | 261 | 22 |
7 | 273 | 295 | 22 |
8 | 315 | 334 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5459.t1 MSYINEAKDLKVTPASDASDDIRVASSSEVKVDDDSHEVFKQADGKVNFRTVSWIRASAIFLKMLFATGILSIPS VMYDLGAFPGAVNLVGWCVINAYGAIILSNFRTLYPQCHSVADMAQLIGGPMLRELVGFMFIVTYVITAASGIIG VSAAFNALSLHSLCTVWFSFIATIIIAGFASVRKFSHIGWLTWVGFVSILAAVLIVVIGVTTRSRPAIAPQTGPY DLGYHAIGSPSFAAGITASATIFVSSAATSAFLPVISEMRKPKDYPKAVYLCMSFVTSSYLAFALVIYAWCGKWI ASPALGSAGTTIKRVAYGIALPGLIVSGSLYVHVAAKYLFPKEPPLRIASWQGNVPFPEKEVSTPVQCVF* |
Coding | >Ani_SJS100_1|g5459.t1 ATGTCGTACATCAATGAGGCCAAGGACCTCAAGGTCACTCCAGCCTCGGATGCTAGCGACGACATCAGAGTCGCT AGTTCTTCAGAGGTCAAAGTAGACGACGATAGCCATGAAGTTTTTAAGCAGGCAGATGGCAAGGTCAATTTTCGC ACTGTCAGCTGGATCCGTGCATCAGCAATCTTCCTGAAGATGCTGTTCGCAACGGGCATCCTCTCCATCCCATCA GTGATGTATGACCTGGGGGCCTTCCCTGGTGCCGTTAACCTGGTAGGATGGTGTGTCATCAATGCCTACGGAGCC ATAATCCTGAGCAATTTTCGCACACTATATCCACAATGTCACTCCGTGGCCGACATGGCCCAGCTCATAGGAGGC CCCATGCTCCGCGAGCTTGTCGGATTCATGTTCATCGTGACATACGTGATTACTGCTGCATCAGGGATAATTGGC GTCTCGGCCGCATTCAACGCCCTCTCCCTTCATTCCCTGTGCACAGTGTGGTTTTCATTCATCGCAACCATCATC ATCGCAGGCTTTGCTAGCGTGCGCAAGTTCTCCCACATCGGGTGGCTCACCTGGGTGGGCTTCGTTAGCATCCTA GCCGCTGTCCTCATTGTCGTAATCGGCGTAACAACCCGCTCCCGCCCAGCCATAGCCCCTCAAACAGGTCCCTAC GACCTGGGCTACCATGCAATCGGCTCCCCAAGCTTCGCAGCGGGGATAACCGCCTCAGCTACCATATTCGTGTCC AGCGCCGCAACCTCGGCCTTCCTGCCCGTGATCTCCGAAATGCGCAAACCCAAGGACTACCCGAAAGCCGTATAC CTCTGCATGTCATTCGTAACATCCTCTTACCTCGCCTTCGCACTAGTAATCTACGCCTGGTGCGGGAAATGGATC GCCTCTCCGGCCCTCGGCAGCGCCGGCACGACCATAAAACGCGTCGCCTACGGCATCGCCCTACCAGGCTTGATT GTCAGCGGCTCTCTCTACGTGCACGTAGCGGCAAAATACCTCTTCCCCAAGGAGCCGCCGTTGAGGATTGCATCG TGGCAGGGCAATGTCCCGTTCCCAGAGAAAGAGGTTTCTACGCCGGTGCAGTGTGTATTTTGA |
Transcript | >Ani_SJS100_1|g5459.t1 ATGTCGTACATCAATGAGGCCAAGGACCTCAAGGTCACTCCAGCCTCGGATGCTAGCGACGACATCAGAGTCGCT AGTTCTTCAGAGGTCAAAGTAGACGACGATAGCCATGAAGTTTTTAAGCAGGCAGATGGCAAGGTCAATTTTCGC ACTGTCAGCTGGATCCGTGCATCAGCAATCTTCCTGAAGATGCTGTTCGCAACGGGCATCCTCTCCATCCCATCA GTGATGTATGACCTGGGGGCCTTCCCTGGTGCCGTTAACCTGGTAGGATGGTGTGTCATCAATGCCTACGGAGCC ATAATCCTGAGCAATTTTCGCACACTATATCCACAATGTCACTCCGTGGCCGACATGGCCCAGCTCATAGGAGGC CCCATGCTCCGCGAGCTTGTCGGATTCATGTTCATCGTGACATACGTGATTACTGCTGCATCAGGGATAATTGGC GTCTCGGCCGCATTCAACGCCCTCTCCCTTCATTCCCTGTGCACAGTGTGGTTTTCATTCATCGCAACCATCATC ATCGCAGGCTTTGCTAGCGTGCGCAAGTTCTCCCACATCGGGTGGCTCACCTGGGTGGGCTTCGTTAGCATCCTA GCCGCTGTCCTCATTGTCGTAATCGGCGTAACAACCCGCTCCCGCCCAGCCATAGCCCCTCAAACAGGTCCCTAC GACCTGGGCTACCATGCAATCGGCTCCCCAAGCTTCGCAGCGGGGATAACCGCCTCAGCTACCATATTCGTGTCC AGCGCCGCAACCTCGGCCTTCCTGCCCGTGATCTCCGAAATGCGCAAACCCAAGGACTACCCGAAAGCCGTATAC CTCTGCATGTCATTCGTAACATCCTCTTACCTCGCCTTCGCACTAGTAATCTACGCCTGGTGCGGGAAATGGATC GCCTCTCCGGCCCTCGGCAGCGCCGGCACGACCATAAAACGCGTCGCCTACGGCATCGCCCTACCAGGCTTGATT GTCAGCGGCTCTCTCTACGTGCACGTAGCGGCAAAATACCTCTTCCCCAAGGAGCCGCCGTTGAGGATTGCATCG TGGCAGGGCAATGTCCCGTTCCCAGAGAAAGAGGTTTCTACGCCGGTGCAGTGTGTATTTTGA |
Gene | >Ani_SJS100_1|g5459.t1 ATGTCGTACATCAATGAGGCCAAGGACCTCAAGGTCACTCCAGCCTCGGATGCTAGCGACGACATCAGAGTCGCT AGTTCTTCAGAGGTCAAAGTAGACGACGATAGCCATGAAGTTTTTAAGCAGGCAGATGGCAAGGTCAATTTTCGC ACTGTCAGCTGGATCCGTGCATCAGCAATCTTCCTGAAGAGTATGTCTCCAACTAGTCACCTACAACGCGCAGTT TTCTGATCGGACTTCCTCCAGTGCTGTTCGCAACGGGCATCCTCTCCATCCCATCAGTGATGTATGACCTGGGGG CCTTCCCTGGTGCCGTTAACCTGGTAGGATGGTGTGTCATCAATGCCTACGGAGCCATAATCCTGAGCAATTTTC GCACACTATATCCACAATGTCACTCCGTGGCCGACATGGCCCAGCTCATAGGAGGCCCCATGCTCCGCGAGCTTG TCGGATTCATGTTCATCGTGACATACGTGATTACTGCTGCATCAGGGATAATTGGCGTCTCGGCCGCATTCAACG CCCTCTCCCTTCATTCCCTGTGCACAGTGTGGTTTTCATTCATCGCAACCATCATCATCGCAGGCTTTGCTAGCG TGCGCAAGTTCTCCCACATCGGGTGGCTCACCTGGGTGGGCTTCGTTAGCATCCTAGCCGCTGTCCTCATTGTCG TGTACGTCCCCTAACCCCTTTCCCACCAACACCATAAGCCTAACACCCCTTCCAGAATCGGCGTAACAACCCGCT CCCGCCCAGCCATAGCCCCTCAAACAGGTCCCTACGACCTGGGCTACCATGCAATCGGCTCCCCAAGCTTCGCAG CGGGGATAACCGCCTCAGCTACCATATTCGTGTCCAGCGCCGCAACCTCGGCCTTCCTGCCCGTGATCTCCGAAA TGCGCAAACCCAAGGACTACCCGAAAGCCGTATACCTCTGCATGTCATTCGTAACATCCTCTTACCTCGCCTTCG CACTAGTAATCTACGCCTGGTGCGGGAAATGGATCGCCTCTCCGGCCCTCGGCAGCGCCGGCACGACCATAAAAC GCGTCGCCTACGGCATCGCCCTACCAGGCTTGATTGTCAGCGGCTCTCTCTACGTGCACGTAGCGGCAAAATACC TCTTCGTTCGAATTTTACGTCACTCGCGCCATCTTCAAGCTAACACAGTCATTCACTGGGGTACGTGGTTGGGAT GCACGATAGGATTAGCTGCGATTGCATTTATCTTGGCGTGCGCGATCCCGATATTCACGTATGTGCTGGCGTTGG TGGGGAGCTTGGGGTTTGCGCCGTTGGCGTTGTGTTTGCCGGGGTGGTTGTGGGTGTATAGTCATGGGGAGTATT GGAAGTCTGGAGGGGTGGTGAAGCGGGTTGTGTATTTGTTGCATATATTGTTGATTCTTTTGGGGGCGTTCATGA CGGTGGGTGGGACGTATGGAGTTATTGTGCAGATTATGGATGCGTATAGAGATGGGGAGATCGATGGGGTGTTCT CGTGTGCAGATAATAGTGGTTCTACTTGATCATATCTACTAGAGTAATGTACTAATATATGCAATCAATATTCAT AGATCATGATTTGGTCTTGCTTTGGTGGTCCACACAGATTATGAGGATGTGATTGTAGATTGTCATTCGTCGTAT GGCTCGTTCGAATTGGTAGGAAATCATAACCTTAGCTAACACAGATAGTATTCGAATTGAAAAAAAGAAATGGAA TAGAAAAAGGCGGAAAGTAAATTTAAGACAGCCACGAGACCCTCAATTCTTGACGTTGTCAAGAGACATCAACGC TAACAGACAATCGAGAATCTCCGAATCAGCACATCCTCCTGCAGAACCGGAGCCTGGCATATCCCTGAGCCTACA ACATCAATGATTTGACTGCATACCGTATCATTGAAGACCTGCACTGAACAGTTCGAAACAATACTCATCGTTGCT ATGTAGCCCAAGGAGCCGCCGTTGAGGATTGCATCGTGGCAGGGCAATGTCCCGTTCCCAGAGAAAGAGGTTTCT ACGCCGGTGCAGTGTGTATTTTGA |