© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5446.t1 |
| Gene name | |
| Location | scaffold_030:260490..263476 |
| Strand | + |
| Gene length (bp) | 2986 |
| Transcript length (bp) | 2841 |
| Coding sequence length (bp) | 2841 |
| Protein length (aa) | 947 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07774 | EMC1_C | ER membrane protein complex subunit 1, C-terminal | 1.1E-78 | 724 | 943 |
| PF13360 | PQQ_2 | PQQ-like domain | 6.8E-26 | 63 | 333 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 19 | 0.999763 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 915 | 934 | 19 |
| Orthofinder run ID | 3 |
| Orthogroup | 5722 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5446.t1 MWLQATLLLLASCVPSSLAIYRDEVNHVDYHHALLGFPTSQSTFFLKPSTTSNASLLYTLSEKSLLGAVNPRDGS LVWRQNLSRSDLPAAESNPHGLLRASEGTNALVSALGDYISSWTALDGKLIWENWFEGEVVADLELLELEDASAA PSTKDTLALWSGKAGVVRRLDGDSGRTKWEHLDESGDIPLQLSSSATEVFYVALQPSSRKGYRIKVTSLDPLTGR QTRQQILSSESDLSSTNSVLFVGANTAAPMIVWADQSFKTLKVNVIGTKQVHSFDIENTSGESVSSITVHAPKKL ESLPHFLVHYETESTTWAEVYHVDLKSASVSKAYELPRLQGWSVFSTSNKDANVYFTRITQSETTVVSSASHGVL GRWVHQAPPMEQALHSVSEVVAKDKSVAVRTAAALESGDWQLIRNGQTEWTRYEALSGALAATWVEEAVQEDLAH QLEVEGHESLYGAYVHRVKRHVRDLQHLPEWLKGLPKRILTSILTDEVSNLDSFGIVKSVIVATENGRVYALDAA KHGAVSWKVKAAEADSWNVKAILAHPGTATVYVDDGSSVTLDATSGEILARTPGTAKIRSVAVAHDGNAPVTVGI KDNGTPLAPIDGPGFFVTLSDDGRVLGWAARDNKHPVWQFLPTPGEKIIQATARPSHDPVASIGKVLGNRSVLYK YLNPNLALITAVGESSATFYLLDAISGKILHSSTHQGVDPTQPIASVISENWFAYSFWADAVDPSSAKGYQLVIS ELYESPVPNDRGPLDSASNYSSISDLPLPHVISQAFIIPEPISHMAVTQTRQGITVRQLLCTLPSSNAIIGIPRP VLDPRRPIGRDPTSTEAEEGLFKYNPFLEFDGKWYHTHSREVSGIKSVLSAPTLLESTSLIFAFGGDIFATRATP SQAFDVLGKGFSKLQLVLTIVALTAGVIVLAPMVKRKQINMIWKSR* |
| Coding | >Ani_SJS100_1|g5446.t1 ATGTGGCTACAGGCGACGCTTCTCTTGCTCGCCTCGTGCGTTCCCTCGTCACTGGCCATCTACCGGGACGAGGTC AACCACGTCGATTACCATCACGCGCTGCTTGGCTTTCCCACTTCCCAATCGACCTTCTTCCTTAAACCGTCTACT ACCTCCAATGCCTCCTTGCTCTACACCCTCTCAGAGAAGTCGCTGCTCGGTGCAGTGAACCCCAGGGATGGCTCC CTTGTCTGGAGACAGAACCTCTCCCGATCTGATCTGCCCGCGGCTGAAAGCAATCCCCACGGTCTACTCCGCGCC TCCGAAGGCACAAACGCCCTGGTCAGCGCGCTAGGTGATTACATTTCTTCGTGGACTGCACTGGATGGCAAATTG ATCTGGGAAAACTGGTTTGAGGGTGAAGTGGTCGCTGATCTTGAGCTTTTGGAGCTGGAGGATGCCAGTGCGGCT CCGTCGACGAAAGACACTCTGGCGCTTTGGAGCGGAAAGGCTGGCGTTGTCCGAAGGCTGGATGGAGATTCGGGT CGGACGAAGTGGGAGCACTTGGATGAAAGCGGTGATATTCCCCTCCAATTGTCGTCATCGGCCACCGAGGTCTTC TACGTCGCTCTGCAGCCGTCCTCGCGGAAAGGATACAGAATCAAGGTTACTTCCTTGGATCCCTTGACCGGCCGC CAAACCCGACAGCAGATTCTGAGCTCGGAAAGTGACTTGTCTAGCACCAACTCGGTTCTCTTCGTGGGCGCGAAC ACTGCCGCACCTATGATTGTCTGGGCGGATCAGTCATTCAAGACACTCAAGGTCAACGTCATCGGTACGAAGCAG GTACACTCGTTCGATATTGAAAATACAAGTGGTGAGAGTGTTAGCTCTATCACTGTCCATGCCCCCAAGAAGCTC GAATCGCTGCCGCATTTCCTGGTGCATTACGAGACGGAGTCCACCACTTGGGCGGAAGTCTATCACGTCGATCTC AAGTCTGCTTCGGTATCCAAGGCCTACGAACTTCCTCGCTTGCAGGGATGGTCCGTTTTCTCTACGAGCAACAAG GATGCCAACGTCTACTTCACCCGTATCACTCAGTCGGAGACGACCGTCGTCTCTTCAGCCTCCCATGGGGTATTG GGAAGATGGGTCCACCAGGCACCCCCTATGGAGCAAGCCCTGCACTCTGTGTCGGAGGTCGTTGCCAAGGATAAG AGCGTTGCCGTCCGGACGGCCGCTGCTTTGGAATCTGGTGATTGGCAATTGATTCGCAATGGCCAGACGGAATGG ACCAGATATGAAGCTCTGTCGGGTGCCCTGGCCGCTACTTGGGTCGAGGAGGCCGTCCAGGAGGATCTGGCCCAT CAATTAGAAGTTGAGGGTCACGAAAGCCTCTACGGGGCCTACGTGCACCGCGTCAAGCGTCACGTCAGAGACCTT CAGCATCTTCCCGAGTGGCTGAAGGGGCTGCCCAAGCGTATTTTGACGAGTATCTTGACCGATGAGGTTTCGAAC CTCGATAGTTTCGGTATTGTCAAGTCTGTTATTGTGGCCACAGAGAACGGAAGAGTATACGCCCTTGATGCCGCC AAGCACGGCGCCGTGTCCTGGAAGGTCAAGGCTGCGGAAGCGGACTCGTGGAATGTGAAGGCTATTCTGGCTCAT CCTGGCACTGCTACGGTGTATGTCGATGATGGCAGCTCTGTCACTCTGGATGCCACGTCTGGCGAGATTCTGGCG CGCACCCCCGGCACTGCAAAGATCCGCTCGGTTGCCGTCGCCCACGATGGCAACGCTCCCGTTACCGTCGGCATC AAGGACAATGGCACACCCCTGGCGCCTATTGATGGCCCGGGTTTCTTCGTAACGCTGAGCGATGATGGCCGTGTC CTCGGATGGGCCGCTCGCGATAACAAGCACCCTGTCTGGCAGTTCCTGCCTACCCCGGGCGAGAAGATCATCCAG GCCACCGCGCGGCCCTCCCATGATCCTGTTGCTTCTATCGGTAAAGTCCTGGGCAACCGGTCCGTACTCTACAAG TACCTGAACCCCAACCTCGCCCTCATCACTGCTGTGGGCGAGAGCTCTGCCACCTTCTACCTTCTGGACGCCATC TCCGGAAAGATCCTTCACTCCAGCACCCACCAAGGAGTCGACCCCACGCAGCCCATTGCCTCTGTTATCTCCGAG AACTGGTTCGCCTACTCCTTCTGGGCAGACGCTGTCGACCCCTCCAGCGCCAAGGGCTACCAGCTGGTGATCTCC GAGCTCTACGAGTCCCCCGTTCCCAATGATCGCGGCCCTCTGGACTCAGCATCGAACTACTCCAGCATCAGTGAC CTCCCTCTGCCCCACGTGATCTCGCAAGCCTTCATCATCCCGGAACCTATCTCTCACATGGCCGTCACTCAGACC CGCCAGGGCATCACCGTTCGCCAACTCCTCTGCACTCTTCCCTCCTCCAATGCCATCATTGGCATCCCCCGTCCC GTCCTCGACCCCCGCCGTCCCATCGGCCGGGACCCGACCTCCACCGAAGCCGAAGAGGGTCTCTTCAAGTACAAC CCCTTCCTCGAATTTGATGGCAAATGGTATCACACGCATTCCCGGGAAGTTTCCGGTATCAAGAGCGTACTTTCC GCCCCGACGCTGCTCGAAAGTACTAGCTTGATCTTCGCCTTCGGCGGAGACATCTTCGCTACACGAGCAACTCCT AGCCAGGCATTCGATGTCCTGGGCAAGGGATTCTCCAAGCTGCAATTAGTCTTGACTATTGTGGCGCTGACGGCC GGTGTGATTGTTTTGGCTCCGATGGTCAAGAGAAAGCAGATCAACATGATCTGGAAATCTAGATGA |
| Transcript | >Ani_SJS100_1|g5446.t1 ATGTGGCTACAGGCGACGCTTCTCTTGCTCGCCTCGTGCGTTCCCTCGTCACTGGCCATCTACCGGGACGAGGTC AACCACGTCGATTACCATCACGCGCTGCTTGGCTTTCCCACTTCCCAATCGACCTTCTTCCTTAAACCGTCTACT ACCTCCAATGCCTCCTTGCTCTACACCCTCTCAGAGAAGTCGCTGCTCGGTGCAGTGAACCCCAGGGATGGCTCC CTTGTCTGGAGACAGAACCTCTCCCGATCTGATCTGCCCGCGGCTGAAAGCAATCCCCACGGTCTACTCCGCGCC TCCGAAGGCACAAACGCCCTGGTCAGCGCGCTAGGTGATTACATTTCTTCGTGGACTGCACTGGATGGCAAATTG ATCTGGGAAAACTGGTTTGAGGGTGAAGTGGTCGCTGATCTTGAGCTTTTGGAGCTGGAGGATGCCAGTGCGGCT CCGTCGACGAAAGACACTCTGGCGCTTTGGAGCGGAAAGGCTGGCGTTGTCCGAAGGCTGGATGGAGATTCGGGT CGGACGAAGTGGGAGCACTTGGATGAAAGCGGTGATATTCCCCTCCAATTGTCGTCATCGGCCACCGAGGTCTTC TACGTCGCTCTGCAGCCGTCCTCGCGGAAAGGATACAGAATCAAGGTTACTTCCTTGGATCCCTTGACCGGCCGC CAAACCCGACAGCAGATTCTGAGCTCGGAAAGTGACTTGTCTAGCACCAACTCGGTTCTCTTCGTGGGCGCGAAC ACTGCCGCACCTATGATTGTCTGGGCGGATCAGTCATTCAAGACACTCAAGGTCAACGTCATCGGTACGAAGCAG GTACACTCGTTCGATATTGAAAATACAAGTGGTGAGAGTGTTAGCTCTATCACTGTCCATGCCCCCAAGAAGCTC GAATCGCTGCCGCATTTCCTGGTGCATTACGAGACGGAGTCCACCACTTGGGCGGAAGTCTATCACGTCGATCTC AAGTCTGCTTCGGTATCCAAGGCCTACGAACTTCCTCGCTTGCAGGGATGGTCCGTTTTCTCTACGAGCAACAAG GATGCCAACGTCTACTTCACCCGTATCACTCAGTCGGAGACGACCGTCGTCTCTTCAGCCTCCCATGGGGTATTG GGAAGATGGGTCCACCAGGCACCCCCTATGGAGCAAGCCCTGCACTCTGTGTCGGAGGTCGTTGCCAAGGATAAG AGCGTTGCCGTCCGGACGGCCGCTGCTTTGGAATCTGGTGATTGGCAATTGATTCGCAATGGCCAGACGGAATGG ACCAGATATGAAGCTCTGTCGGGTGCCCTGGCCGCTACTTGGGTCGAGGAGGCCGTCCAGGAGGATCTGGCCCAT CAATTAGAAGTTGAGGGTCACGAAAGCCTCTACGGGGCCTACGTGCACCGCGTCAAGCGTCACGTCAGAGACCTT CAGCATCTTCCCGAGTGGCTGAAGGGGCTGCCCAAGCGTATTTTGACGAGTATCTTGACCGATGAGGTTTCGAAC CTCGATAGTTTCGGTATTGTCAAGTCTGTTATTGTGGCCACAGAGAACGGAAGAGTATACGCCCTTGATGCCGCC AAGCACGGCGCCGTGTCCTGGAAGGTCAAGGCTGCGGAAGCGGACTCGTGGAATGTGAAGGCTATTCTGGCTCAT CCTGGCACTGCTACGGTGTATGTCGATGATGGCAGCTCTGTCACTCTGGATGCCACGTCTGGCGAGATTCTGGCG CGCACCCCCGGCACTGCAAAGATCCGCTCGGTTGCCGTCGCCCACGATGGCAACGCTCCCGTTACCGTCGGCATC AAGGACAATGGCACACCCCTGGCGCCTATTGATGGCCCGGGTTTCTTCGTAACGCTGAGCGATGATGGCCGTGTC CTCGGATGGGCCGCTCGCGATAACAAGCACCCTGTCTGGCAGTTCCTGCCTACCCCGGGCGAGAAGATCATCCAG GCCACCGCGCGGCCCTCCCATGATCCTGTTGCTTCTATCGGTAAAGTCCTGGGCAACCGGTCCGTACTCTACAAG TACCTGAACCCCAACCTCGCCCTCATCACTGCTGTGGGCGAGAGCTCTGCCACCTTCTACCTTCTGGACGCCATC TCCGGAAAGATCCTTCACTCCAGCACCCACCAAGGAGTCGACCCCACGCAGCCCATTGCCTCTGTTATCTCCGAG AACTGGTTCGCCTACTCCTTCTGGGCAGACGCTGTCGACCCCTCCAGCGCCAAGGGCTACCAGCTGGTGATCTCC GAGCTCTACGAGTCCCCCGTTCCCAATGATCGCGGCCCTCTGGACTCAGCATCGAACTACTCCAGCATCAGTGAC CTCCCTCTGCCCCACGTGATCTCGCAAGCCTTCATCATCCCGGAACCTATCTCTCACATGGCCGTCACTCAGACC CGCCAGGGCATCACCGTTCGCCAACTCCTCTGCACTCTTCCCTCCTCCAATGCCATCATTGGCATCCCCCGTCCC GTCCTCGACCCCCGCCGTCCCATCGGCCGGGACCCGACCTCCACCGAAGCCGAAGAGGGTCTCTTCAAGTACAAC CCCTTCCTCGAATTTGATGGCAAATGGTATCACACGCATTCCCGGGAAGTTTCCGGTATCAAGAGCGTACTTTCC GCCCCGACGCTGCTCGAAAGTACTAGCTTGATCTTCGCCTTCGGCGGAGACATCTTCGCTACACGAGCAACTCCT AGCCAGGCATTCGATGTCCTGGGCAAGGGATTCTCCAAGCTGCAATTAGTCTTGACTATTGTGGCGCTGACGGCC GGTGTGATTGTTTTGGCTCCGATGGTCAAGAGAAAGCAGATCAACATGATCTGGAAATCTAGATGA |
| Gene | >Ani_SJS100_1|g5446.t1 ATGTGGCTACAGGCGACGCTTCTCTTGCTCGCCTCGTGCGTTCCCTCGTCACTGGCCATCTACCGGGACGAGGTC AACCACGTCGATTACCATCACGCGCTGCTTGGCTTTCCCACTTCCCAATCGACCTTCTTCCTTAAACCGTCTACT ACCTCCAATGCCTCCTTGCTCTACACCCTCTCAGAGAAGTCGCTGCTCGGTGCAGTGAACCCCAGGGATGGCTCC CTTGTCTGGAGACAGAACCTCTCCCGATCTGATCTGCCCGCGGCTGAAAGCAATCCCCACGGTCTACTCCGCGCC TCCGAAGGCACAAACGCCCTGGTCAGCGCGCTAGGTGATTACATTTCTTCGTGGACTGCACTGGATGGCAAATTG ATCTGGGAAAACTGGTTTGAGGGTGAAGTGGTCGCTGATCTTGAGCTTTTGGAGCTGGAGGATGCCAGTGCGGCT CCGTCGACGAAAGACACTCTGGCGCTTTGGAGCGGAAAGGCTGGCGTTGTCCGAAGGCTGGATGGAGATTCGGGT CGGACGAAGTGGGAGCACTTGGATGAAAGGTACGATTATACTTGTAAATAATGTCTGTTGGAGCTTCCATCGCTG ACACTTCCCGGTTAGCGGTGATATTCCCCTCCAATTGTCGTCATCGGCCACCGAGGTCTTCTACGTCGCTCTGCA GCCGTCCTCGCGGAAAGGATACAGAATCAAGGTTACTTCCTTGGATCCCTTGACCGGCCGCCAAACCCGACAGCA GATTCTGAGCTCGGAAAGTGACTTGTCTAGCACCAACTCGGTTCTCTTCGTGGGCGCGAACACTGCCGCACCTAT GATTGTCTGGGCGGATCAGTCATTCAAGACACTCAAGGTCAACGTCATCGGTACGAAGCAGGTACACTCGTTCGA TATTGAAAATACAAGTGGTGAGAGTGTTAGCTCTATCACTGTCCATGCCCCCAAGAAGCTCGAATCGCTGCCGCA TTTCCTGGTGCATTACGAGACGGAGTCCACCACTTGGGCGGAAGTCTATCACGTCGATCTCAAGTCTGCTTCGGT ATCCAAGGCCTACGAACTTCCTCGCTTGCAGGGATGGTCCGTTTTCTCTACGAGCAACAAGGATGCCAACGTCTA CTTCACCCGTATCACTCAGTCGGAGACGACCGTCGTCTCTTCAGCCTCCCATGGGGTATTGGGAAGATGGGTCCA CCAGGCACCCCCTATGGAGCAAGCCCTGCACTCTGTGTCGGAGGTCGTTGCCAAGGATAAGAGCGTTGCCGTCCG GACGGCCGCTGCTTTGGAATCTGGTGATTGGCAATTGATTCGCAATGGCCAGACGGAATGGACCAGATATGAAGC TCTGTCGGGTGCCCTGGCCGCTACTTGGGTCGAGGAGGCCGTCCAGGAGGATCTGGCCCATCAATTAGAAGTTGA GGGTCACGAAAGCCTCTACGGGGCCTACGTGCACCGCGTCAAGCGTCACGTCAGAGACCTTCAGCATCTTCCCGA GTGGCTGAAGGGGCTGCCCAAGCGTATTTTGACGAGTATCTTGACCGATGAGGTTTCGAACCTCGATAGTTTCGG TATTGTCAAGTCTGTTATTGTGGCCACAGAGAACGGAAGAGTATACGCCCTTGATGCCGCCAAGCACGGCGCCGT GTCCTGGAAGGTCAAGGCTGCGGAAGCGGACTCGTGGAATGTGAAGGCTATTCTGGCTCATCCTGGCACTGCTAC GGTGTATGTCGATGATGGCAGCTCTGTCACTCTGGATGCCACGTCTGGCGAGATTCTGGCGCGCACCCCCGGCAC TGCAAAGATCCGCTCGGTTGCCGTCGCCCACGATGGCAACGCTCCCGTTACCGTCGGCATCAAGGACAATGGCAC ACCCCTGGCGCCTATTGATGGCCCGGGTTTCTTCGTAACGCTGAGCGATGATGGCCGTGTCCTCGGATGGGCCGC TCGCGATAACAAGCACCCTGTCTGGCAGTTCCTGCCTACCCCGGGCGAGAAGATCATCCAGGCCACCGCGCGGCC CTCCCATGATCCTGTTGCTTCTATCGGTAAAGTCCTGGGCAACCGGTCCGTACTCTACAAGTACCTGAACCCCAA CCTCGCCCTCATCACTGCTGTGGGCGAGAGCTCTGCCACCTTCTACCTTCTGGACGCCATCTCCGGAAAGATCCT TCACTCCAGCACCCACCAAGGAGTCGACCCCACGCAGCCCATTGCCTCTGTTATCTCCGAGAACTGGTTCGCCTA CTCCTTCTGGGCAGACGCTGTCGACCCCTCCAGCGCCAAGGGCTACCAGCTGGTGATCTCCGAGCTCTACGAGTC CCCCGTTCCCAATGATCGCGGCCCTCTGGACTCAGCATCGAACTACTCCAGCATCAGTGACCTCCCTCTGCCCCA CGTGATCTCGCAAGCCTTCATCATCCCGGAACCTATCTCTCACATGGCCGTCACTCAGACCCGCCAGGGCATCAC CGTTCGCCAACTCCTCTGCACTCTTCCCTCCTCCAATGCCATCATTGGCATCCCCCGTCCCGTCCTCGACCCCCG CCGTCCCATCGGCCGGGACCCGACCTCCACCGAAGCCGAAGAGGGTCTCTTCAAGTACAACCCCTTCCTCGAATT TGATGGCAAATGGTATCACACGCATTCCCGGGAAGTTTCCGGTATCAAGAGCGTACTTTCCGCCCCGACGCTGCT CGAAAGTACTAGCTTGATCTTCGCCTTCGGCGGAGACATCTTCGCTACACGAGCAACTCCTAGCCAGGCATTCGA TGTCCTGGGCAAGGGATTCTCCAAGCTGCAATTAGTCTTGACTATTGTGGCGCTGACGGCCGGTGTGATTGTTTT GGCTCCGATGGTACGTTTACCTCCACCTTACCCTTTCTACCACAGTTGTGCCATATCTAGTAGACAGATAACTAA CCGAGATTCCCTTTAACAGGTCAAGAGAAAGCAGATCAACATGATCTGGAAATCTAGATGA |