Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ani_SJS100_1\|g5423.t1
Gene name
Location	scaffold_030:199741..200949
Strand	-
Gene length (bp)	1208
Transcript length (bp)	972
Coding sequence length (bp)	972
Protein length (aa)	324

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF08058	NPCC	Nuclear pore complex component	3.6E-21	136	248

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	164	186	22
2	201	220	19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ani_SJS100_1\|g5423.t1 MWGAAAPKLTSAAESSRFGLAENFAPKALVVASDPCRRTYHQNNQSLPHSHSLNPDSCLPLPCDHDPVGALFVIR HQRSHSHRCVQQQFSYFSAISTQAFTLPRLQYKPMASPAPPSTPKTASAPAATPDGSQTPGKWRHPHLNEVVRRQ NAGTFGDRNINKLVWNTAALFATWVFGDTVKSYSLWLQNISPISTYPDLSLLVLRVIFALNILIALYPLFRPKDN FSDIPLTPTQRSLLGLDPSATQSLTPGTTQQIRFALISKCWRFRAQAIVRTFIFAFSEPVIAQSGHEWEQGERAE AELRIFVSTRAQLILLALQRIFL*
Coding	>Ani_SJS100_1\|g5423.t1 ATGTGGGGAGCCGCGGCGCCTAAGCTGACTAGTGCCGCTGAAAGCTCCCGATTTGGGTTGGCTGAAAACTTCGCG CCAAAGGCGCTTGTGGTTGCCAGTGACCCTTGCCGGCGCACTTATCATCAAAACAATCAGTCGCTGCCCCATTCA CATTCACTCAACCCCGACTCCTGCCTGCCCCTCCCCTGCGACCATGATCCTGTTGGGGCCCTCTTTGTAATCCGT CATCAGAGATCCCATAGTCACCGATGTGTCCAACAGCAATTTTCCTATTTCAGTGCTATTTCCACCCAAGCGTTT ACTCTCCCCCGCCTTCAATATAAACCAATGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAACTGCATCTGCACCT GCAGCGACACCCGATGGCTCTCAGACGCCTGGAAAGTGGCGTCATCCTCATCTGAACGAGGTCGTTCGTCGACAG AATGCTGGTACATTCGGAGATCGCAATATAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTG TTTGGAGATACCGTCAAGTCATATTCGCTTTGGCTTCAGAACATCAGTCCGATCTCTACATATCCCGATCTTTCA TTGCTAGTCCTACGAGTCATCTTTGCTCTGAACATCCTGATTGCATTGTACCCTCTCTTTCGTCCGAAAGACAAT TTCTCCGATATTCCATTGACCCCTACACAACGCTCGCTTTTGGGACTGGATCCCTCCGCCACACAGTCACTGACC CCGGGCACGACCCAGCAGATCCGGTTCGCCCTTATCAGCAAGTGCTGGCGCTTCCGGGCACAGGCTATCGTCAGG ACCTTCATTTTCGCCTTCTCCGAGCCCGTTATTGCACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGGCGGAG GCCGAGCTTCGGATCTTCGTCTCCACTCGGGCGCAGCTCATCCTTCTCGCCCTTCAAAGAATCTTCCTTTAA
Transcript	>Ani_SJS100_1\|g5423.t1 ATGTGGGGAGCCGCGGCGCCTAAGCTGACTAGTGCCGCTGAAAGCTCCCGATTTGGGTTGGCTGAAAACTTCGCG CCAAAGGCGCTTGTGGTTGCCAGTGACCCTTGCCGGCGCACTTATCATCAAAACAATCAGTCGCTGCCCCATTCA CATTCACTCAACCCCGACTCCTGCCTGCCCCTCCCCTGCGACCATGATCCTGTTGGGGCCCTCTTTGTAATCCGT CATCAGAGATCCCATAGTCACCGATGTGTCCAACAGCAATTTTCCTATTTCAGTGCTATTTCCACCCAAGCGTTT ACTCTCCCCCGCCTTCAATATAAACCAATGGCGTCCCCCGCCCCTCCTTCTACCCCGAAAACTGCATCTGCACCT GCAGCGACACCCGATGGCTCTCAGACGCCTGGAAAGTGGCGTCATCCTCATCTGAACGAGGTCGTTCGTCGACAG AATGCTGGTACATTCGGAGATCGCAATATAAATAAGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTG TTTGGAGATACCGTCAAGTCATATTCGCTTTGGCTTCAGAACATCAGTCCGATCTCTACATATCCCGATCTTTCA TTGCTAGTCCTACGAGTCATCTTTGCTCTGAACATCCTGATTGCATTGTACCCTCTCTTTCGTCCGAAAGACAAT TTCTCCGATATTCCATTGACCCCTACACAACGCTCGCTTTTGGGACTGGATCCCTCCGCCACACAGTCACTGACC CCGGGCACGACCCAGCAGATCCGGTTCGCCCTTATCAGCAAGTGCTGGCGCTTCCGGGCACAGGCTATCGTCAGG ACCTTCATTTTCGCCTTCTCCGAGCCCGTTATTGCACAAAGTGGTCACGAATGGGAGCAAGGAGAGCGGGCGGAG GCCGAGCTTCGGATCTTCGTCTCCACTCGGGCGCAGCTCATCCTTCTCGCCCTTCAAAGAATCTTCCTTTAA
Gene	>Ani_SJS100_1\|g5423.t1 ATGTGGGGAGCCGCGGCGCCTAAGCTGACTAGTGCCGCTGAAAGCTCCCGATTTGGGTTGGCTGAAAACTTCGCG CCAAAGGCGCTTGTGGTTGCCAGTGACCCTTGCCGGCGCACTTATCATCAAAACAATCAGTCGCTGCCCCATTCA CATTCACTCAACCCCGACTCCTGCCTGCCCCTCCCCTGCGACCATGATCCTGTTGGGGCCCTCTTTGTAATCCGT CATCAGAGATCCCATAGTCACCGATGTGGTAGGGCACGCGTATCTTCATTTCGCATTTCATTCAACTACAGGTAA GTCCAACAGCAATTTTCCTATTTCAGGTAAGTCATCATACCCTTCCCCCCCTTTGTCCATCGTCGTGACAAGATG CCATACTAAGACCATGTAGTGCTATTTCCACCCAAGCGTTTACTCTCCCCCGCCTTCAATATAAACCAATGGCGT CCCCCGCCCCTCCTTCTACCCCGAAAACTGCATCTGCACCTGCAGCGACACCCGATGGCTCTCAGACGCCTGGAA AGTGGCGTCATCCTCATCTGAACGAGGTCGTTCGTCGACAGAATGCTGGTACATTCGGAGATCGCAATATAAATA AGCTTGTGTGGAACACGGCCGCTTTGTTCGCGACCTGGGTGTTTGGAGATACCGTCAAGTCATAGTGAGTGCTGC TAGCAGACACATCAAGTGCGTGGTTCCAGGGGGCCTTCTAACCAGCGTCGCAACAGTTCGCTTTGGCTTCAGAAC ATCAGTCCGATCTCTACATATCCCGATCTTTCATTGCTAGTCCTACGAGTCATCTTTGCTCTGAACATCCTGATT GCATTGTACCCTCTCTTTCGTCCGAAAGACAATTTCTCCGATATTCCATTGACCCCTACACAACGCTCGCTTTTG GGACTGGATCCCTCCGCCACACAGTCACTGACCCCGGGCACGACGTACGTTACTCCGCCCAGGTACCGACTTTCT GCGTCTCGGAACGCTAGCCCAGCCAGCAGATCCGGTTCGCCCTTATCAGCAAGTGCTGGCGCTTCCGGGCACAGG CTATCGTCAGGACCTTCATTTTCGCCTTCTCCGAGCCCGTTATTGCACAAAGTGGTCACGAATGGGAGCAAGGAG AGCGGGCGGAGGCCGAGCTTCGGATCTTCGTCTCCACTCGGGCGCAGCTCATCCTTCTCGCCCTTCAAAGAATCT TCCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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