© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5407.t1 |
| Gene name | |
| Location | scaffold_030:160221..161126 |
| Strand | - |
| Gene length (bp) | 905 |
| Transcript length (bp) | 843 |
| Coding sequence length (bp) | 843 |
| Protein length (aa) | 281 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 39 | 61 | 22 |
| 3 | 96 | 118 | 22 |
| 4 | 128 | 150 | 22 |
| 5 | 162 | 184 | 22 |
| 6 | 188 | 207 | 19 |
| 7 | 220 | 242 | 22 |
| 8 | 247 | 269 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5407.t1 MANSHEVLGCFHGFYGIGATISPFIATSVITKAGWKWNSYYYLLTGAAVLELVNATSAFWSETASKYQQDHPSSA DRDNGGSLNQTRLSLMYRVTWICSIFLFLYGGIEVAIGGWIVVFMTSVRHGSPFASGMAGTDFWLGVTLGRFVLG FVTPRIGEKISIIVYILLAIALELVFWLVPEFIVSAVAVALVGFFLGTIFPGVVVVATRLLPKHLHVAAIGFAAA FSMGGGAVFPFMIGAIAQAKGVTVLQPILVAMLVVALLIWGTVLRAPVPQSLHEV* |
| Coding | >Ani_SJS100_1|g5407.t1 ATGGCCAACTCTCACGAAGTCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCCTTTATT GCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATACTATTACCTTCTGACGGGGGCTGCGGTTTTA GAACTCGTCAACGCCACCAGCGCCTTTTGGTCAGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCT GATAGAGATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTCACCTGGATCTGTTCTATC TTTCTCTTCCTGTATGGCGGCATCGAGGTCGCTATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCAT GGCAGCCCCTTTGCATCTGGTATGGCTGGAACAGACTTCTGGCTCGGCGTCACGCTGGGCCGCTTCGTACTGGGG TTCGTCACACCTCGCATCGGAGAGAAAATATCGATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTC TTCTGGCTCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTCTTCTTGGGAACCATTTTC CCCGGCGTTGTGGTGGTTGCTACTCGGTTGTTGCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCG TTCTCTATGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCCAAGGGAGTGACAGTACTG CAGCCCATCTTAGTGGCAATGTTGGTTGTTGCGCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAG TCACTGCATGAAGTTTGA |
| Transcript | >Ani_SJS100_1|g5407.t1 ATGGCCAACTCTCACGAAGTCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCCTTTATT GCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATACTATTACCTTCTGACGGGGGCTGCGGTTTTA GAACTCGTCAACGCCACCAGCGCCTTTTGGTCAGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCT GATAGAGATAACGGTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTCACCTGGATCTGTTCTATC TTTCTCTTCCTGTATGGCGGCATCGAGGTCGCTATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCAT GGCAGCCCCTTTGCATCTGGTATGGCTGGAACAGACTTCTGGCTCGGCGTCACGCTGGGCCGCTTCGTACTGGGG TTCGTCACACCTCGCATCGGAGAGAAAATATCGATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTC TTCTGGCTCGTTCCGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTCTTCTTGGGAACCATTTTC CCCGGCGTTGTGGTGGTTGCTACTCGGTTGTTGCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCG TTCTCTATGGGTGGGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCCAAGGGAGTGACAGTACTG CAGCCCATCTTAGTGGCAATGTTGGTTGTTGCGCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAG TCACTGCATGAAGTTTGA |
| Gene | >Ani_SJS100_1|g5407.t1 ATGGCCAACTCTCACGAAGTCCTCGGATGTTTTCACGGATTCTATGGCATCGGGGCTACAATTAGTCCCTTTATT GCGACTAGCGTGATCACGAAAGCTGGCTGGAAATGGAATTCATACTATTACCTTCTGGTAGGTAGACTGGACCTT TCCGACGACCTATTGTCTTCTGCCAATTCTAATGCGAATCCAAGACGGGGGCTGCGGTTTTAGAACTCGTCAACG CCACCAGCGCCTTTTGGTCAGAGACTGCATCCAAGTATCAACAGGATCATCCGTCTTCTGCTGATAGAGATAACG GTGGGTCTCTCAACCAGACCCGACTATCACTCATGTACAGAGTCACCTGGATCTGTTCTATCTTTCTCTTCCTGT ATGGCGGCATCGAGGTCGCTATCGGAGGTTGGATCGTCGTATTCATGACCAGTGTCCGCCATGGCAGCCCCTTTG CATCTGGTATGGCTGGAACAGACTTCTGGCTCGGCGTCACGCTGGGCCGCTTCGTACTGGGGTTCGTCACACCTC GCATCGGAGAGAAAATATCGATTATCGTGTACATTTTGCTTGCTATTGCGCTTGAATTGGTCTTCTGGCTCGTTC CGGAGTTTATCGTCTCGGCGGTAGCGGTTGCACTGGTTGGGTTCTTCTTGGGAACCATTTTCCCCGGCGTTGTGG TGGTTGCTACTCGGTTGTTGCCAAAGCACTTGCATGTCGCAGCTATTGGGTTTGCAGCTGCGTTCTCTATGGGTG GGGGAGCCGTCTTTCCCTTCATGATCGGTGCTATTGCGCAGGCCAAGGGAGTGACAGTACTGCAGCCCATCTTAG TGGCAATGTTGGTTGTTGCGCTGTTGATTTGGGGGACGGTACTGCGAGCTCCGGTCCCGCAGTCACTGCATGAAG TTTGA |