Protein ID | Ani_SJS100_1|g5371.t1 |
Gene name | |
Location | scaffold_030:35507..36939 |
Strand | - |
Gene length (bp) | 1432 |
Transcript length (bp) | 1269 |
Coding sequence length (bp) | 1269 |
Protein length (aa) | 423 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00153 | Mito_carr | Mitochondrial carrier protein | 2.9E-19 | 71 | 161 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 3.8E-17 | 168 | 259 |
PF00153 | Mito_carr | Mitochondrial carrier protein | 3.4E-19 | 269 | 410 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 130 | 152 | 22 |
2 | 164 | 186 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5371.t1 MSLTSRVLGLFTTTETPSTDPPSPESASQFPNVASASSDHVFHSAGPISATSDHNAQKAASLADEEEPRPPYLHA MLAGGTGGTCGDMLMHSLDTVKTRQQGDPHFPPKYTSMTSSYATIYRQEGFFRGLYGGVTPALFGSFPGTVIFFG VYEFTKRKMLDSGINPNIAYLSGGFFADLAASIVYVPSEVLKTRLQLQGRYNNPHFNSGYNYRSTTDALRTIVRQ EGFSALFYGYRATIYRDLPFSALQFAFYEQEQRLAKEWVGSREIGLPMEILTAVTAGGMAGVMTCPMDVVKTRIQ TQKNPESSSSTKSSGEPASTKESPRQHTSSHTTSNLRTHSRPISTSGASTSVAPPGAPRLDTSSFFTGLKMIYQT EGIAGWFRGVGPRGVWTSIQSGTMLVMYQYLLKKLEAYQGVEDLSPL* |
Coding | >Ani_SJS100_1|g5371.t1 ATGAGCTTGACCTCGCGCGTCTTGGGCCTGTTCACGACGACAGAGACACCGTCTACCGACCCCCCTTCTCCTGAG TCGGCCTCTCAGTTCCCCAACGTTGCTTCCGCTAGCAGCGACCATGTCTTTCATTCCGCCGGCCCGATAAGCGCA ACCAGCGACCATAATGCTCAGAAGGCTGCGTCCCTTGCGGACGAGGAGGAGCCTCGGCCTCCCTATCTACATGCT ATGCTGGCTGGAGGTACCGGTGGTACCTGCGGTGACATGCTTATGCATTCGTTAGATACGGTGAAGACTCGACAG CAAGGCGATCCCCACTTCCCTCCGAAATATACCTCCATGACCTCGTCGTATGCGACTATCTATCGACAAGAGGGT TTCTTCCGTGGTCTGTATGGTGGTGTTACGCCGGCGCTCTTCGGGTCCTTTCCTGGAACGGTCATCTTCTTTGGT GTTTATGAGTTCACCAAGCGGAAGATGCTGGACTCTGGGATTAACCCCAATATTGCGTATCTGTCTGGAGGCTTC TTCGCTGATTTGGCTGCCTCCATCGTATACGTTCCCTCCGAGGTTTTGAAGACGCGACTGCAGTTGCAGGGACGC TACAACAACCCGCATTTCAACTCGGGATACAACTACCGCTCGACAACGGATGCGCTACGCACGATTGTTCGCCAG GAAGGGTTCTCCGCCCTCTTCTACGGATACCGGGCCACCATCTACCGTGACCTTCCATTCTCGGCCCTGCAGTTC GCCTTCTACGAACAAGAACAGCGGTTGGCGAAAGAATGGGTGGGCTCGCGAGAAATCGGACTGCCCATGGAGATC TTGACGGCTGTCACGGCTGGTGGAATGGCAGGTGTTATGACCTGTCCGATGGACGTTGTCAAGACGCGGATCCAG ACGCAGAAGAACCCGGAAAGCTCGAGCTCGACCAAGTCGTCGGGTGAGCCTGCGTCGACCAAGGAGAGCCCGCGC CAGCATACGTCATCGCATACGACGTCCAACCTGCGCACACACTCGCGACCCATCTCGACGTCTGGAGCATCGACG TCGGTCGCGCCGCCCGGGGCTCCCCGTCTGGATACCTCGTCTTTCTTCACTGGCCTGAAGATGATCTACCAGACC GAGGGAATCGCGGGATGGTTCCGCGGAGTCGGACCCCGCGGAGTGTGGACCAGTATTCAGAGTGGAACAATGCTG GTTATGTACCAGTACCTTTTGAAGAAACTGGAAGCTTACCAGGGGGTGGAAGACCTGAGCCCGCTGTAA |
Transcript | >Ani_SJS100_1|g5371.t1 ATGAGCTTGACCTCGCGCGTCTTGGGCCTGTTCACGACGACAGAGACACCGTCTACCGACCCCCCTTCTCCTGAG TCGGCCTCTCAGTTCCCCAACGTTGCTTCCGCTAGCAGCGACCATGTCTTTCATTCCGCCGGCCCGATAAGCGCA ACCAGCGACCATAATGCTCAGAAGGCTGCGTCCCTTGCGGACGAGGAGGAGCCTCGGCCTCCCTATCTACATGCT ATGCTGGCTGGAGGTACCGGTGGTACCTGCGGTGACATGCTTATGCATTCGTTAGATACGGTGAAGACTCGACAG CAAGGCGATCCCCACTTCCCTCCGAAATATACCTCCATGACCTCGTCGTATGCGACTATCTATCGACAAGAGGGT TTCTTCCGTGGTCTGTATGGTGGTGTTACGCCGGCGCTCTTCGGGTCCTTTCCTGGAACGGTCATCTTCTTTGGT GTTTATGAGTTCACCAAGCGGAAGATGCTGGACTCTGGGATTAACCCCAATATTGCGTATCTGTCTGGAGGCTTC TTCGCTGATTTGGCTGCCTCCATCGTATACGTTCCCTCCGAGGTTTTGAAGACGCGACTGCAGTTGCAGGGACGC TACAACAACCCGCATTTCAACTCGGGATACAACTACCGCTCGACAACGGATGCGCTACGCACGATTGTTCGCCAG GAAGGGTTCTCCGCCCTCTTCTACGGATACCGGGCCACCATCTACCGTGACCTTCCATTCTCGGCCCTGCAGTTC GCCTTCTACGAACAAGAACAGCGGTTGGCGAAAGAATGGGTGGGCTCGCGAGAAATCGGACTGCCCATGGAGATC TTGACGGCTGTCACGGCTGGTGGAATGGCAGGTGTTATGACCTGTCCGATGGACGTTGTCAAGACGCGGATCCAG ACGCAGAAGAACCCGGAAAGCTCGAGCTCGACCAAGTCGTCGGGTGAGCCTGCGTCGACCAAGGAGAGCCCGCGC CAGCATACGTCATCGCATACGACGTCCAACCTGCGCACACACTCGCGACCCATCTCGACGTCTGGAGCATCGACG TCGGTCGCGCCGCCCGGGGCTCCCCGTCTGGATACCTCGTCTTTCTTCACTGGCCTGAAGATGATCTACCAGACC GAGGGAATCGCGGGATGGTTCCGCGGAGTCGGACCCCGCGGAGTGTGGACCAGTATTCAGAGTGGAACAATGCTG GTTATGTACCAGTACCTTTTGAAGAAACTGGAAGCTTACCAGGGGGTGGAAGACCTGAGCCCGCTGTAA |
Gene | >Ani_SJS100_1|g5371.t1 ATGAGCTTGACCTCGCGCGTCTTGGGCCTGTTCACGACGACAGAGACACCGTCTACCGACCCCCCTTCTCCTGAG TCGGCCTCTCAGTTCCCCAACGTTGCTTCCGCTAGCAGCGACCATGTCTTTCATTCCGCCGGCCCGATAAGCGCA ACCAGCGACCATAATGCTCAGAAGGCTGCGTCCCTTGCGGACGAGGAGGAGCCTCGGCCTCCCTATCTACATGTA TGTTTGTGTTAGTCTGGTGGAGCGCGACCCTGTTCGCGCAGGTTCCGTTACTACTCGGTATAGCTTCCAGATCGT TGGTTCTGACCATTGTTGCTTCAATAGGCTATGCTGGCTGGAGGTACCGGTGGTACCTGCGGTGACATGCTTATG CATTCGTTAGATACGGTGAAGACTCGACAGCAAGGCGATCCCCACTTCCCTCCGAAATATACCTCCATGACCTCG TCGTATGCGACTATCTATCGACAAGAGGGTTTCTTCCGTGGTCTGTATGGTGGTGTTACGCCGGCGCTCTTCGGG TCCTTTCCTGGAACGGTCATCTTCTTTGGTGTTTATGAGTTCACCAAGCGGAAGATGCTGGACTCTGGGATTAAC CCCAATATTGCGTATCTGTCTGGAGGTAAGGGTGTTTTTGTGGCTTCACCTTGGATGGGTGATACTAACTCGGTT GCTGCTAGGCTTCTTCGCTGATTTGGCTGCCTCCATCGTATACGTTCCCTCCGAGGTTTTGAAGACGCGACTGCA GTTGCAGGGACGCTACAACAACCCGCATTTCAACTCGGGATACAACTACCGCTCGACAACGGATGCGCTACGCAC GATTGTTCGCCAGGAAGGGTTCTCCGCCCTCTTCTACGGATACCGGGCCACCATCTACCGTGACCTTCCATTCTC GGCCCTGCAGTTCGCCTTCTACGAACAAGAACAGCGGTTGGCGAAAGAATGGGTGGGCTCGCGAGAAATCGGACT GCCCATGGAGATCTTGACGGCTGTCACGGCTGGTGGAATGGCAGGTGTTATGACCTGTCCGATGGACGTTGTCAA GACGCGGATCCAGACGCAGAAGAACCCGGAAAGCTCGAGCTCGACCAAGTCGTCGGGTGAGCCTGCGTCGACCAA GGAGAGCCCGCGCCAGCATACGTCATCGCATACGACGTCCAACCTGCGCACACACTCGCGACCCATCTCGACGTC TGGAGCATCGACGTCGGTCGCGCCGCCCGGGGCTCCCCGTCTGGATACCTCGTCTTTCTTCACTGGCCTGAAGAT GATCTACCAGACCGAGGGAATCGCGGGATGGTTCCGCGGAGTCGGACCCCGCGGAGTGTGGACCAGTATTCAGAG TGGAACAATGCTGGTTATGTACCAGTACCTTTTGAAGAAACTGGAAGCTTACCAGGGGGTGGAAGACCTGAGCCC GCTGTAA |