© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5343.t1 |
| Gene name | |
| Location | scaffold_029:322167..324156 |
| Strand | - |
| Gene length (bp) | 1989 |
| Transcript length (bp) | 1737 |
| Coding sequence length (bp) | 1737 |
| Protein length (aa) | 579 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 2.3E-136 | 81 | 541 |
| PF13520 | AA_permease_2 | Amino acid permease | 7.4E-31 | 84 | 519 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008150 | biological_process | No |
| GO:0005575 | cellular_component | No |
| GO:0051234 | establishment of localization | No |
| GO:0051179 | localization | No |
| GO:0009987 | cellular process | No |
| GO:0005215 | transporter activity | No |
| GO:0006810 | transport | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 55 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 84 | 106 | 22 |
| 2 | 116 | 138 | 22 |
| 3 | 159 | 181 | 22 |
| 4 | 191 | 213 | 22 |
| 5 | 220 | 242 | 22 |
| 6 | 257 | 279 | 22 |
| 7 | 313 | 335 | 22 |
| 8 | 350 | 372 | 22 |
| 9 | 411 | 430 | 19 |
| 10 | 440 | 462 | 22 |
| 11 | 489 | 511 | 22 |
| 12 | 516 | 533 | 17 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5343.t1 MATWKSCPEHLSVMEDNKVASQGKLPIDSAVTEENGSQSPSDRSLTPSGLRERRRNGLTKDVESDNEEEETKLKR NLKNRHLQMIAIGGTIGTGLFISSGTALAEAGPAGSLIAYAFVGSIVYSVMCSLGEMATYIPIPGAFTSYAARLV DPSLGFAMGWIYWFNWASTYAVELTASGMIIQYWNDQLSIAIFIGVFWVVISAVNFLPVGFYGELEFWFSITKVL TVLGFMIFAICIDAGVGKQGYIGFKYWHDPGAFAPYLITSNESVGKFVGFWAVLIQAGFSYQGTELVGVAAGETE NPQKTVPSAIRKTFIRILVFFVLTIFFIGLLVPYTNPDLASGAENASASPMVIAANLAGVKVLPSLINAVLLTVV LSAANSNVYSGSRVLLGLAQEGFAPSVFGWVTRRGVPYVSVAFTALFGLLGFMNVSESGTTVFNWLVNISSVAGF ICWTSINASHIAFMKAMKARGLSRDTLPYKAIWQPWLAWYGLFFNILIIFTQGFTAWIPTFNVSDFWVAYICPVL FVILYVGHKAWYRTRFVRPIEADLDTGRPPYTTWESSNPKEGWVRRIWDSIMG* |
| Coding | >Ani_SJS100_1|g5343.t1 ATGGCCACATGGAAAAGCTGTCCTGAACACCTGTCGGTTATGGAAGACAACAAGGTCGCTTCCCAAGGGAAGCTG CCAATTGACAGTGCCGTCACCGAGGAGAATGGCTCCCAATCCCCCTCCGATCGCTCCCTCACTCCCTCCGGCCTG CGCGAGCGCCGGCGCAATGGCCTCACCAAGGATGTCGAAAGCGACAATGAGGAGGAAGAAACTAAGCTGAAGCGC AACCTGAAGAACCGTCACCTGCAGATGATCGCCATCGGTGGCACCATTGGTACAGGTCTCTTCATCAGCAGTGGA ACGGCCCTTGCGGAAGCTGGCCCGGCGGGTTCCCTCATCGCATACGCCTTCGTTGGTTCTATCGTCTACTCGGTC ATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCATCCCCGGTGCCTTCACCTCCTATGCCGCGCGTCTCGTC GACCCGAGTTTGGGTTTCGCCATGGGCTGGATCTACTGGTTCAACTGGGCCTCCACCTACGCCGTCGAATTGACC GCGTCCGGTATGATCATCCAGTACTGGAACGATCAGCTGTCCATTGCTATCTTCATCGGTGTCTTCTGGGTCGTC ATCTCTGCCGTCAACTTCCTCCCCGTCGGCTTCTACGGCGAGCTGGAGTTCTGGTTCTCTATCACGAAGGTCTTG ACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTGATGCTGGTGTAGGCAAGCAGGGCTACATTGGCTTCAAG TACTGGCATGACCCGGGTGCTTTTGCTCCCTACCTGATCACCTCCAATGAATCCGTTGGCAAGTTCGTCGGCTTC TGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGGGTACCGAGCTGGTCGGTGTCGCCGCTGGTGAGACTGAG AACCCCCAGAAGACTGTCCCCTCGGCTATTCGCAAGACTTTCATCCGTATCCTGGTCTTCTTTGTCCTGACTATC TTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCGACCTGGCCAGCGGAGCTGAGAACGCCTCCGCCTCTCCC ATGGTCATTGCGGCCAACTTGGCCGGTGTCAAGGTTCTTCCTAGCTTGATCAACGCTGTTCTTCTCACTGTCGTC TTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTCGTGTCCTGCTTGGCCTGGCCCAGGAGGGTTTCGCGCCC TCAGTCTTCGGATGGGTCACTCGCCGTGGTGTCCCCTACGTCAGTGTGGCTTTCACCGCTCTCTTCGGACTGCTG GGATTCATGAACGTCTCGGAATCAGGTACCACCGTCTTCAACTGGCTGGTCAACATCTCCAGTGTGGCTGGATTC ATTTGCTGGACTTCCATCAACGCCAGTCATATTGCCTTCATGAAGGCAATGAAAGCGCGCGGTCTCTCTCGTGAC ACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGGCCTGGTACGGTCTGTTCTTCAACATCCTGATCATCTTC ACTCAGGGTTTCACCGCTTGGATCCCGACTTTCAATGTGTCGGACTTTTGGGTAGCCTACATCTGCCCCGTTTTG TTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACCGCACGCGCTTTGTGCGCCCCATCGAGGCGGATCTGGAC ACCGGACGTCCGCCGTACACTACCTGGGAATCGAGCAATCCCAAGGAGGGATGGGTGCGCAGGATCTGGGATAGC ATCATGGGATAG |
| Transcript | >Ani_SJS100_1|g5343.t1 ATGGCCACATGGAAAAGCTGTCCTGAACACCTGTCGGTTATGGAAGACAACAAGGTCGCTTCCCAAGGGAAGCTG CCAATTGACAGTGCCGTCACCGAGGAGAATGGCTCCCAATCCCCCTCCGATCGCTCCCTCACTCCCTCCGGCCTG CGCGAGCGCCGGCGCAATGGCCTCACCAAGGATGTCGAAAGCGACAATGAGGAGGAAGAAACTAAGCTGAAGCGC AACCTGAAGAACCGTCACCTGCAGATGATCGCCATCGGTGGCACCATTGGTACAGGTCTCTTCATCAGCAGTGGA ACGGCCCTTGCGGAAGCTGGCCCGGCGGGTTCCCTCATCGCATACGCCTTCGTTGGTTCTATCGTCTACTCGGTC ATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCATCCCCGGTGCCTTCACCTCCTATGCCGCGCGTCTCGTC GACCCGAGTTTGGGTTTCGCCATGGGCTGGATCTACTGGTTCAACTGGGCCTCCACCTACGCCGTCGAATTGACC GCGTCCGGTATGATCATCCAGTACTGGAACGATCAGCTGTCCATTGCTATCTTCATCGGTGTCTTCTGGGTCGTC ATCTCTGCCGTCAACTTCCTCCCCGTCGGCTTCTACGGCGAGCTGGAGTTCTGGTTCTCTATCACGAAGGTCTTG ACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTGATGCTGGTGTAGGCAAGCAGGGCTACATTGGCTTCAAG TACTGGCATGACCCGGGTGCTTTTGCTCCCTACCTGATCACCTCCAATGAATCCGTTGGCAAGTTCGTCGGCTTC TGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGGGTACCGAGCTGGTCGGTGTCGCCGCTGGTGAGACTGAG AACCCCCAGAAGACTGTCCCCTCGGCTATTCGCAAGACTTTCATCCGTATCCTGGTCTTCTTTGTCCTGACTATC TTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCGACCTGGCCAGCGGAGCTGAGAACGCCTCCGCCTCTCCC ATGGTCATTGCGGCCAACTTGGCCGGTGTCAAGGTTCTTCCTAGCTTGATCAACGCTGTTCTTCTCACTGTCGTC TTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTCGTGTCCTGCTTGGCCTGGCCCAGGAGGGTTTCGCGCCC TCAGTCTTCGGATGGGTCACTCGCCGTGGTGTCCCCTACGTCAGTGTGGCTTTCACCGCTCTCTTCGGACTGCTG GGATTCATGAACGTCTCGGAATCAGGTACCACCGTCTTCAACTGGCTGGTCAACATCTCCAGTGTGGCTGGATTC ATTTGCTGGACTTCCATCAACGCCAGTCATATTGCCTTCATGAAGGCAATGAAAGCGCGCGGTCTCTCTCGTGAC ACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGGCCTGGTACGGTCTGTTCTTCAACATCCTGATCATCTTC ACTCAGGGTTTCACCGCTTGGATCCCGACTTTCAATGTGTCGGACTTTTGGGTAGCCTACATCTGCCCCGTTTTG TTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACCGCACGCGCTTTGTGCGCCCCATCGAGGCGGATCTGGAC ACCGGACGTCCGCCGTACACTACCTGGGAATCGAGCAATCCCAAGGAGGGATGGGTGCGCAGGATCTGGGATAGC ATCATGGGATAG |
| Gene | >Ani_SJS100_1|g5343.t1 ATGGCCACATGGAAAAGGTTTGTCATGTCTGTCTCTGTTTCTGTTTTTCCTCTTCCCCAGAACTCAATCCCTCAA TCCGGTCATCATTGACGTTGACTGACACATCGACTCCTTCCCAGCTGTCGTGCGCCGAGGCTGTCTTCTCCGCTG CCTCACGCTCTCGTCTTCTCGCCTTCCTGATCTCCTCTCACACCTTTCCCCACCTCAGCTGAACACCTGTCGGTT ATGGAAGACAACAAGGTCGCTTCCCAAGGGAAGCTGCCAATTGACAGTGCCGTCACCGAGGAGAATGGCTCCCAA TCCCCCTCCGATCGCTCCCTCACTCCCTCCGGCCTGCGCGAGCGCCGGCGCAATGGCCTCACCAAGGATGTCGAA AGCGACAATGAGGAGGAAGAAACTAAGCTGAAGCGCAACCTGAAGAACCGTCACCTGCAGATGATCGCCATCGGT GAGTGAAAGACGCTTCAATCAGACATTTGATACTGCTATGAACTCGTCACTAACCCCCCCGAAGGTGGCACCATT GGTACAGGTCTCTTCATCAGCAGTGGAACGGCCCTTGCGGAAGCTGGCCCGGCGGGTTCCCTCATCGCATACGCC TTCGTTGGTTCTATCGTCTACTCGGTCATGTGTTCGTTGGGTGAGATGGCTACCTACATCCCCATCCCCGGTGCC TTCACCTCCTATGCCGCGCGTCTCGTCGACCCGAGTTTGGGTTTCGCCATGGGCTGGATCTACTGGTTCAACTGG GCCTCCACCTACGCCGTCGAATTGACCGCGTCCGGTATGATCATCCAGTACTGGAACGATCAGCTGTCCATTGCT ATCTTCATCGGTGTCTTCTGGGTCGTCATCTCTGCCGTCAACTTCCTCCCCGTCGGCTTCTACGGCGAGCTGGAG TTCTGGTTCTCTATCACGAAGGTCTTGACCGTTCTGGGCTTCATGATCTTCGCCATCTGCATTGATGCTGGTGTA GGCAAGCAGGGCTACATTGGCTTCAAGTACTGGCATGACCCGGGTGCTTTTGCTCCCTACCTGATCACCTCCAAT GAATCCGTTGGCAAGTTCGTCGGCTTCTGGGCTGTGCTCATCCAAGCTGGTTTCTCCTACCAGGGTACCGAGCTG GTCGGTGTCGCCGCTGGTGAGACTGAGAACCCCCAGAAGACTGTCCCCTCGGCTATTCGCAAGACTTTCATCCGT ATCCTGGTCTTCTTTGTCCTGACTATCTTCTTCATCGGCTTGTTGGTTCCCTACACCAACCCCGACCTGGCCAGC GGAGCTGAGAACGCCTCCGCCTCTCCCATGGTCATTGCGGCCAACTTGGCCGGTGTCAAGGTTCTTCCTAGCTTG ATCAACGCTGTTCTTCTCACTGTCGTCTTGTCCGCCGCCAACTCCAACGTCTACAGTGGCAGTCGTGTCCTGCTT GGCCTGGCCCAGGAGGGTTTCGCGCCCTCAGTCTTCGGATGGGTCACTCGCCGTGGTGTCCCCTACGTCAGTGTG GCTTTCACCGCTCTCTTCGGACTGCTGGGATTCATGAACGTCTCGGAATCAGGTACCACCGTCTTCAACTGGCTG GTCAACATCTCCAGTGTGGCTGGATTCATTTGCTGGACTTCCATCAACGCCAGTCATATTGCCTTCATGAAGGCA ATGAAAGCGCGCGGTCTCTCTCGTGACACACTCCCCTACAAGGCCATCTGGCAGCCCTGGTTGGCCTGGTACGGT CTGTTCTTCAACATCCTGATCATCTTCACTCAGGGTTTCACCGCTTGGATCCCGACTTTCAATGTGTCGGACTTT TGGGTAGCCTACATCTGCCCCGTTTTGTTTGTGATTCTGTACGTCGGCCACAAGGCCTGGTACCGCACGCGCTTT GTGCGCCCCATCGAGGCGGATCTGGACACCGGACGTCCGCCGTACACTACCTGGGAATCGAGCAATCCCAAGGAG GGATGGGTGCGCAGGATCTGGGATAGCATCATGGGATAG |