© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ani_SJS100_1|g5335.t1 |
| Gene name | |
| Location | scaffold_029:298871..299911 |
| Strand | - |
| Gene length (bp) | 1040 |
| Transcript length (bp) | 930 |
| Coding sequence length (bp) | 930 |
| Protein length (aa) | 310 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01764 | Lipase_3 | Lipase (class 3) | 6.2E-34 | 104 | 236 |
| PF03893 | Lipase3_N | Lipase 3 N-terminal region | 3.2E-11 | 19 | 78 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006629 | lipid metabolic process | Yes |
| GO:0016042 | lipid catabolic process | Yes |
| GO:0008150 | biological_process | No |
| GO:1901575 | organic substance catabolic process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0009056 | catabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ani_SJS100_1|g5335.t1 MRLLKSLLVAASAIASCNALPGALHKRDITTQQLDTFTFWVQYAAASYCEPNYAGKAGHKITCWAQNCPAVEASD ATIITDFSNTTPTDTSGYLAVDHTHRAIILAFRGSYSIRSWLADFTFVYTDPNLCSGCEAELGFWSSWTNVRKTI TPTLNNTVSQYPDYELVIVGHSLGAAIATLAAADIRETDGLNATLYAYASPRVANPKLAEFITNQNKGANYRFAH TDDPVPRVPLEVMGYKHISPEYWISSGNNQSVSTQDVVVFQDGDDKRGDVGFPNLLDFEAHLWYFEAWEVDACKG EGLPWKRSN* |
| Coding | >Ani_SJS100_1|g5335.t1 ATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGCCATAGCCAGCTGCAATGCCCTCCCGGGGGCTCTTCAC AAAAGAGACATCACCACCCAACAGCTCGACACCTTCACCTTCTGGGTGCAATATGCGGCAGCCTCCTACTGCGAA CCCAACTATGCCGGCAAGGCAGGCCACAAAATAACCTGCTGGGCACAGAACTGCCCTGCAGTCGAAGCCTCCGAC GCAACCATCATCACGGACTTCTCCAACACCACCCCCACCGACACATCCGGCTATCTAGCAGTCGACCACACGCAC CGCGCCATCATCCTCGCCTTCCGCGGCAGCTACTCCATCCGCAGCTGGCTGGCGGACTTCACCTTCGTCTACACC GACCCGAACCTTTGTAGTGGGTGTGAAGCCGAACTCGGCTTCTGGAGTTCGTGGACAAACGTCCGCAAAACCATC ACGCCGACCCTCAACAACACCGTATCCCAATACCCGGACTATGAACTCGTTATTGTCGGCCACTCACTCGGCGCC GCCATCGCGACCCTCGCAGCAGCAGATATTCGCGAGACCGACGGGCTCAACGCAACGTTATACGCATACGCATCG CCCCGCGTAGCGAACCCCAAGCTGGCTGAGTTTATTACGAATCAGAATAAGGGGGCGAATTATCGATTTGCGCAT ACAGATGATCCTGTGCCCAGGGTGCCGTTGGAGGTCATGGGGTATAAGCATATTAGTCCTGAGTATTGGATTAGC TCGGGGAATAACCAGAGTGTGAGTACGCAGGATGTGGTGGTGTTCCAGGATGGCGATGATAAGAGGGGGGATGTT GGGTTTCCGAATTTGTTGGACTTCGAGGCCCACCTTTGGTATTTTGAAGCCTGGGAGGTCGATGCGTGTAAGGGG GAGGGATTGCCTTGGAAAAGGTCCAATTAA |
| Transcript | >Ani_SJS100_1|g5335.t1 ATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGCCATAGCCAGCTGCAATGCCCTCCCGGGGGCTCTTCAC AAAAGAGACATCACCACCCAACAGCTCGACACCTTCACCTTCTGGGTGCAATATGCGGCAGCCTCCTACTGCGAA CCCAACTATGCCGGCAAGGCAGGCCACAAAATAACCTGCTGGGCACAGAACTGCCCTGCAGTCGAAGCCTCCGAC GCAACCATCATCACGGACTTCTCCAACACCACCCCCACCGACACATCCGGCTATCTAGCAGTCGACCACACGCAC CGCGCCATCATCCTCGCCTTCCGCGGCAGCTACTCCATCCGCAGCTGGCTGGCGGACTTCACCTTCGTCTACACC GACCCGAACCTTTGTAGTGGGTGTGAAGCCGAACTCGGCTTCTGGAGTTCGTGGACAAACGTCCGCAAAACCATC ACGCCGACCCTCAACAACACCGTATCCCAATACCCGGACTATGAACTCGTTATTGTCGGCCACTCACTCGGCGCC GCCATCGCGACCCTCGCAGCAGCAGATATTCGCGAGACCGACGGGCTCAACGCAACGTTATACGCATACGCATCG CCCCGCGTAGCGAACCCCAAGCTGGCTGAGTTTATTACGAATCAGAATAAGGGGGCGAATTATCGATTTGCGCAT ACAGATGATCCTGTGCCCAGGGTGCCGTTGGAGGTCATGGGGTATAAGCATATTAGTCCTGAGTATTGGATTAGC TCGGGGAATAACCAGAGTGTGAGTACGCAGGATGTGGTGGTGTTCCAGGATGGCGATGATAAGAGGGGGGATGTT GGGTTTCCGAATTTGTTGGACTTCGAGGCCCACCTTTGGTATTTTGAAGCCTGGGAGGTCGATGCGTGTAAGGGG GAGGGATTGCCTTGGAAAAGGTCCAATTAA |
| Gene | >Ani_SJS100_1|g5335.t1 ATGCGCCTCCTCAAATCTCTACTCGTGGCTGCATCTGCCATAGCCAGCTGCAATGCCCTCCCGGGGGCTCTTCAC AAAAGAGGTACCAATGCCCATTCCATACAACTTCCATTCCTCACCCCCACTGACCATTACTCCTAGACATCACCA CCCAACAGCTCGACACCTTCACCTTCTGGGTGCAATATGCGGCAGCCTCCTACTGCGAACCCAACTATGCCGGCA AGGCAGGCCACAAAATAACCTGCTGGGCACAGAACTGCCCTGCAGTCGAAGCCTCCGACGCAACCATCATCACGG ACTTCTCCAAGTACGCCCCTCCTTTCCCCTCCCATCAAGAAAACCCTAACCAACCCCGCAGCACCACCCCCACCG ACACATCCGGCTATCTAGCAGTCGACCACACGCACCGCGCCATCATCCTCGCCTTCCGCGGCAGCTACTCCATCC GCAGCTGGCTGGCGGACTTCACCTTCGTCTACACCGACCCGAACCTTTGTAGTGGGTGTGAAGCCGAACTCGGCT TCTGGAGTTCGTGGACAAACGTCCGCAAAACCATCACGCCGACCCTCAACAACACCGTATCCCAATACCCGGACT ATGAACTCGTTATTGTCGGCCACTCACTCGGCGCCGCCATCGCGACCCTCGCAGCAGCAGATATTCGCGAGACCG ACGGGCTCAACGCAACGTTATACGCATACGCATCGCCCCGCGTAGCGAACCCCAAGCTGGCTGAGTTTATTACGA ATCAGAATAAGGGGGCGAATTATCGATTTGCGCATACAGATGATCCTGTGCCCAGGGTGCCGTTGGAGGTCATGG GGTATAAGCATATTAGTCCTGAGTATTGGATTAGCTCGGGGAATAACCAGAGTGTGAGTACGCAGGATGTGGTGG TGTTCCAGGATGGCGATGATAAGAGGGGGGATGTTGGGTTTCCGAATTTGTTGGACTTCGAGGCCCACCTTTGGT ATTTTGAAGCCTGGGAGGTCGATGCGTGTAAGGGGGAGGGATTGCCTTGGAAAAGGTCCAATTAA |