Fungal Genomics

at Utrecht University

General Properties

Protein IDAni_SJS100_1|g5307.t1
Gene name
Locationscaffold_029:218212..220274
Strand-
Gene length (bp)2062
Transcript length (bp)1185
Coding sequence length (bp)1185
Protein length (aa) 395

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07885 Ion_trans_2 Ion channel 2.6E-15 155 224
PF07885 Ion_trans_2 Ion channel 6.3E-19 278 351

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 63 85 22
2 105 127 22
3 147 166 19
4 176 193 17
5 202 224 22
6 268 285 17
7 298 320 22
8 330 352 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ani_SJS100_1|g5307.t1
MATIFGICAVSHGWQEIVSSDAGTAMAAQTTRAVTLKTISLALSATADLTLLLTMLLKWNAVRGYLATALIYFIS
SMLLFSLIGVTVHQPPQIIAPQTWHYTQNFYYGIFAATSYLFVAFLLSIYACSVRTIHLSIQDRRIIENTSIILR
AFTLAAFLLGGAAIYIPIEGWSLADALYWSAYTILTVGIGNIVPKTHLGRSLLIPYATGGITCLGLFVSSIASFS
RKMGELRLKFELEQEGIHLHKTPHPDIVKIKQIKSHWQRRHRWIIFSFYFCAWLLLWLVSARIFKSSERSQGWTY
FESLYFTFVSLTTIGYGDFYPTSNLGKSFFVFWALLAVPVMTTLVGVVGQVGFHTVVYFVRRIGKGWSWGGFMRR
VVLPDTYTPQMFEFASSQI*
Coding >Ani_SJS100_1|g5307.t1
ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG
ATGGCAGCGCAGACTACTCGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACC
CTCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCC
TCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCAC
TATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTAC
GCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGC
GCATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGAT
GCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGA
AGCCTTCTAATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCA
AGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCC
GACATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTC
TGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTAT
TTCGAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTG
GGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAG
GTGGGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGG
GTAGTGTTGCCAGACACATACACACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA
Transcript >Ani_SJS100_1|g5307.t1
ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG
ATGGCAGCGCAGACTACTCGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACC
CTCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCC
TCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCAC
TATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTAC
GCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGC
GCATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGAT
GCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGA
AGCCTTCTAATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCA
AGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCC
GACATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTC
TGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTAT
TTCGAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTG
GGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAG
GTGGGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGG
GTAGTGTTGCCAGACACATACACACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA
Gene >Ani_SJS100_1|g5307.t1
ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG
ATGGCAGCGCAGACTACTCGGTGTGTCTCCATAAACTACGATACTTGAGTTTCAGTTTCCCAGTACCGCTTCTAA
TAACCCAACAGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACCCTCCTGCTG
ACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCCTCAATGCTT
CTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCACTATACACAG
AATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTACGCATGCAGC
GTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGCGCATTCACC
CTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGATGCACTCTAC
TGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGAAGCCTTCTA
ATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCAAGAAAGATG
GGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCCGACATCGTC
AAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTCTGCGCATGG
CTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTATTTCGAGTCT
TTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTGGGGAAGTCG
TTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAGGTGGGGTTT
CATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGGGTAGGTATG
TTTGTGGATGGGAGGAGGCTTGATTTATCTGCTCCTGCCGGGGGAGGGGCAGATGTGAGGGTGGCAGGTGGTGAT
TTGGAGGTCGATATAGAGAGACAGGCCTGCCCAACTCTTGACATAGTGACTCTGCCACTTGAGAGACCGCGTCCG
GGACAACACAAACTGCACCTGTGTGAAGAGATCAAATCTCTCGTGGACATCCTCAAAGATGACGACAGAGACGTA
GATCTACATCGTGAATGGGCACGTATTGTGTCTCTCCTCAGTGTTGATGAGGGTGGCGGAGCAGAAGTGTTTGGG
GCTGAGACTCATCGGCAGCAAGTAATAAGAGAGGTGGTATCTGCGAATCAGTCCGCGACGGATAGAGATAAGGAA
ATTTTATGGATGGCCAAGTTGCTGGTTGAGAAGTTGTGCTCGTGTTTGAGGGAGGATGTGAGGTGTGAGGGTAGA
TAGGGGGGGTACTTGGTGAGATAAGATGGGTGATTTGGTTTCATCCCTTGCTACCAGCCCGGTAGGCAGGGTACA
TAGTGTATTAATTACCTGACCGGTAACTATACAGCATGCGTGTCTCAGCCTCTGATGATTAATTACATGAATATT
TGGAAGGAATTGCTCATAGCAACCAAGTCAAATTGGCTGCAGTTTCAACAGATAGTGTCAGTGCAGTATACACTC
ATGTATGAGAACGAGAGATTGTACTCCGCACAGCACACTTAATTGATAACTAGTTATGAAAAGTAGAATAATGGC
ATACATGACTAATAATGCACATATACATGCACAACCTTTCATAACTAGTTGTACAGTGTTGCCAGACACATACAC
ACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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