Protein ID | Ani_SJS100_1|g5307.t1 |
Gene name | |
Location | scaffold_029:218212..220274 |
Strand | - |
Gene length (bp) | 2062 |
Transcript length (bp) | 1185 |
Coding sequence length (bp) | 1185 |
Protein length (aa) | 395 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF07885 | Ion_trans_2 | Ion channel | 2.6E-15 | 155 | 224 |
PF07885 | Ion_trans_2 | Ion channel | 6.3E-19 | 278 | 351 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 20 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 63 | 85 | 22 |
2 | 105 | 127 | 22 |
3 | 147 | 166 | 19 |
4 | 176 | 193 | 17 |
5 | 202 | 224 | 22 |
6 | 268 | 285 | 17 |
7 | 298 | 320 | 22 |
8 | 330 | 352 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ani_SJS100_1|g5307.t1 MATIFGICAVSHGWQEIVSSDAGTAMAAQTTRAVTLKTISLALSATADLTLLLTMLLKWNAVRGYLATALIYFIS SMLLFSLIGVTVHQPPQIIAPQTWHYTQNFYYGIFAATSYLFVAFLLSIYACSVRTIHLSIQDRRIIENTSIILR AFTLAAFLLGGAAIYIPIEGWSLADALYWSAYTILTVGIGNIVPKTHLGRSLLIPYATGGITCLGLFVSSIASFS RKMGELRLKFELEQEGIHLHKTPHPDIVKIKQIKSHWQRRHRWIIFSFYFCAWLLLWLVSARIFKSSERSQGWTY FESLYFTFVSLTTIGYGDFYPTSNLGKSFFVFWALLAVPVMTTLVGVVGQVGFHTVVYFVRRIGKGWSWGGFMRR VVLPDTYTPQMFEFASSQI* |
Coding | >Ani_SJS100_1|g5307.t1 ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG ATGGCAGCGCAGACTACTCGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACC CTCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCC TCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCAC TATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTAC GCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGC GCATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGAT GCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGA AGCCTTCTAATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCA AGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCC GACATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTC TGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTAT TTCGAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTG GGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAG GTGGGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGG GTAGTGTTGCCAGACACATACACACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA |
Transcript | >Ani_SJS100_1|g5307.t1 ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG ATGGCAGCGCAGACTACTCGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACC CTCCTGCTGACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCC TCAATGCTTCTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCAC TATACACAGAATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTAC GCATGCAGCGTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGC GCATTCACCCTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGAT GCACTCTACTGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGA AGCCTTCTAATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCA AGAAAGATGGGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCC GACATCGTCAAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTC TGCGCATGGCTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTAT TTCGAGTCTTTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTG GGGAAGTCGTTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAG GTGGGGTTTCATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGG GTAGTGTTGCCAGACACATACACACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA |
Gene | >Ani_SJS100_1|g5307.t1 ATGGCAACAATATTCGGTATTTGTGCAGTTAGCCACGGTTGGCAGGAAATCGTTTCTTCAGATGCAGGGACTGCG ATGGCAGCGCAGACTACTCGGTGTGTCTCCATAAACTACGATACTTGAGTTTCAGTTTCCCAGTACCGCTTCTAA TAACCCAACAGGGCCGTGACTCTCAAGACTATATCGTTGGCCCTTTCGGCTACCGCAGACCTTACCCTCCTGCTG ACCATGCTGCTAAAATGGAACGCAGTGAGAGGATACCTTGCGACAGCACTGATTTACTTCATATCCTCAATGCTT CTCTTCAGTCTCATCGGCGTGACCGTGCATCAGCCACCCCAAATTATCGCCCCTCAAACATGGCACTATACACAG AATTTCTACTACGGCATCTTCGCCGCTACTTCCTACCTCTTCGTTGCATTTCTTTTATCAATCTACGCATGCAGC GTCCGTACCATCCACCTAAGCATCCAAGATCGCCGCATCATCGAAAACACGAGCATCATCCTCCGCGCATTCACC CTCGCTGCTTTCCTCCTCGGCGGCGCAGCCATCTACATTCCCATCGAAGGATGGTCCCTAGCAGATGCACTCTAC TGGTCTGCATACACCATTCTTACAGTCGGAATCGGCAACATCGTCCCGAAAACTCACCTGGGACGAAGCCTTCTA ATCCCCTACGCTACGGGGGGGATCACCTGCCTCGGCCTATTCGTCAGCTCGATTGCCTCGTTCTCAAGAAAGATG GGCGAGCTACGACTGAAATTCGAGCTCGAACAAGAAGGTATTCACCTCCACAAGACACCACATCCCGACATCGTC AAAATCAAACAAATCAAATCCCACTGGCAGCGCCGCCACCGCTGGATCATCTTCTCCTTCTACTTCTGCGCATGG CTTCTCCTCTGGCTCGTCAGCGCCCGTATCTTCAAGTCCTCCGAGCGCAGTCAGGGATGGACGTATTTCGAGTCT TTGTATTTCACGTTCGTGTCGCTGACCACCATCGGGTATGGCGATTTCTATCCGACTAGTAATCTGGGGAAGTCG TTCTTTGTGTTTTGGGCGCTGCTGGCGGTGCCGGTTATGACGACGTTGGTTGGGGTCGTGGGTCAGGTGGGGTTT CATACGGTGGTTTATTTTGTGCGGAGAATTGGGAAGGGATGGTCGTGGGGAGGATTTATGAGACGGGTAGGTATG TTTGTGGATGGGAGGAGGCTTGATTTATCTGCTCCTGCCGGGGGAGGGGCAGATGTGAGGGTGGCAGGTGGTGAT TTGGAGGTCGATATAGAGAGACAGGCCTGCCCAACTCTTGACATAGTGACTCTGCCACTTGAGAGACCGCGTCCG GGACAACACAAACTGCACCTGTGTGAAGAGATCAAATCTCTCGTGGACATCCTCAAAGATGACGACAGAGACGTA GATCTACATCGTGAATGGGCACGTATTGTGTCTCTCCTCAGTGTTGATGAGGGTGGCGGAGCAGAAGTGTTTGGG GCTGAGACTCATCGGCAGCAAGTAATAAGAGAGGTGGTATCTGCGAATCAGTCCGCGACGGATAGAGATAAGGAA ATTTTATGGATGGCCAAGTTGCTGGTTGAGAAGTTGTGCTCGTGTTTGAGGGAGGATGTGAGGTGTGAGGGTAGA TAGGGGGGGTACTTGGTGAGATAAGATGGGTGATTTGGTTTCATCCCTTGCTACCAGCCCGGTAGGCAGGGTACA TAGTGTATTAATTACCTGACCGGTAACTATACAGCATGCGTGTCTCAGCCTCTGATGATTAATTACATGAATATT TGGAAGGAATTGCTCATAGCAACCAAGTCAAATTGGCTGCAGTTTCAACAGATAGTGTCAGTGCAGTATACACTC ATGTATGAGAACGAGAGATTGTACTCCGCACAGCACACTTAATTGATAACTAGTTATGAAAAGTAGAATAATGGC ATACATGACTAATAATGCACATATACATGCACAACCTTTCATAACTAGTTGTACAGTGTTGCCAGACACATACAC ACCCCAGATGTTTGAGTTCGCTTCATCACAGATTTGA |